BLASTX nr result

ID: Panax21_contig00020872 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00020872
         (705 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310948.1| predicted protein [Populus trichocarpa] gi|2...   298   5e-79
ref|XP_002523014.1| conserved hypothetical protein [Ricinus comm...   283   3e-74
ref|XP_002264382.1| PREDICTED: DNA damage response protein WSS1 ...   277   1e-72
emb|CAN76517.1| hypothetical protein VITISV_033675 [Vitis vinifera]   275   8e-72
ref|XP_002317357.1| predicted protein [Populus trichocarpa] gi|2...   259   3e-67

>ref|XP_002310948.1| predicted protein [Populus trichocarpa] gi|222850768|gb|EEE88315.1|
           predicted protein [Populus trichocarpa]
          Length = 331

 Score =  298 bits (764), Expect = 5e-79
 Identities = 138/170 (81%), Positives = 158/170 (92%)
 Frame = -2

Query: 512 MDLNDLNKVWEVKPLKKVRENEAKEILEKVAKQVQPIMRKRRWKVQILYEFCPANPSLLG 333
           MDLNDLNKVWE+KPLKK+ E +A+++LE+VAKQVQPIM+KR+WKV+IL EFCPANP+LLG
Sbjct: 1   MDLNDLNKVWEIKPLKKIGEEDARKVLERVAKQVQPIMKKRKWKVKILSEFCPANPALLG 60

Query: 332 LNVGGGAEVKLRLRRPNNELDFLPYNQILDTMLHELCHNEHGPHNSDFYNLLDEIRKDCE 153
           LN+GGGAEVKLRLRRPNNE DF PY Q+LDTMLHELCHNE+GPHNS FYNLLDEIRK+ E
Sbjct: 61  LNIGGGAEVKLRLRRPNNEWDFFPYEQVLDTMLHELCHNEYGPHNSGFYNLLDEIRKESE 120

Query: 152 ELMAKGITGTGQGFDLPGKRLGGFSRQPPLSSLRQSALVAAENRMKRESL 3
           ELMAKGITGTG+GFDLPG+RLGGFSRQPPLS LRQSAL A ENR +R++L
Sbjct: 121 ELMAKGITGTGEGFDLPGRRLGGFSRQPPLSLLRQSALAATENRARRDAL 170


>ref|XP_002523014.1| conserved hypothetical protein [Ricinus communis]
           gi|223537736|gb|EEF39356.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 326

 Score =  283 bits (723), Expect = 3e-74
 Identities = 132/168 (78%), Positives = 152/168 (90%), Gaps = 1/168 (0%)
 Frame = -2

Query: 512 MDLNDLNKVWEVKPLK-KVRENEAKEILEKVAKQVQPIMRKRRWKVQILYEFCPANPSLL 336
           MDLNDLNK+WEVKPLK K+ E +A  +LEKVAKQVQPIMR   WKV+IL EFCP+NPSL+
Sbjct: 1   MDLNDLNKIWEVKPLKNKIGEEDAMILLEKVAKQVQPIMRNHHWKVRILSEFCPSNPSLM 60

Query: 335 GLNVGGGAEVKLRLRRPNNELDFLPYNQILDTMLHELCHNEHGPHNSDFYNLLDEIRKDC 156
           GLN+GGGAE+KLRLRRPN E DF PY Q+LDTMLHELCHN++GPHN+DFYNLLD+IRK+C
Sbjct: 61  GLNIGGGAEIKLRLRRPNCEWDFFPYEQVLDTMLHELCHNQYGPHNADFYNLLDQIRKEC 120

Query: 155 EELMAKGITGTGQGFDLPGKRLGGFSRQPPLSSLRQSALVAAENRMKR 12
           EEL+AKGITGTGQGFDLPG+ LGGFSRQPPLSS+RQ+AL AAENR +R
Sbjct: 121 EELIAKGITGTGQGFDLPGRCLGGFSRQPPLSSMRQTALAAAENRARR 168


>ref|XP_002264382.1| PREDICTED: DNA damage response protein WSS1 [Vitis vinifera]
           gi|296089891|emb|CBI39710.3| unnamed protein product
           [Vitis vinifera]
          Length = 366

 Score =  277 bits (709), Expect = 1e-72
 Identities = 130/170 (76%), Positives = 150/170 (88%)
 Frame = -2

Query: 512 MDLNDLNKVWEVKPLKKVRENEAKEILEKVAKQVQPIMRKRRWKVQILYEFCPANPSLLG 333
           M+L DLNKVWEVKPLKK  E+EA++ILE+VAK VQPIMRK +W+V++L EFCP NP+LLG
Sbjct: 1   MNLGDLNKVWEVKPLKKAGEDEARKILERVAKHVQPIMRKHKWRVKLLSEFCPNNPALLG 60

Query: 332 LNVGGGAEVKLRLRRPNNELDFLPYNQILDTMLHELCHNEHGPHNSDFYNLLDEIRKDCE 153
           LNVGGG  VKLRLRRPN + DF P++QILDTMLHELCHN HGPHN+DFY L DEIRK+CE
Sbjct: 61  LNVGGGIHVKLRLRRPNRDWDFFPFDQILDTMLHELCHNVHGPHNADFYKLWDEIRKECE 120

Query: 152 ELMAKGITGTGQGFDLPGKRLGGFSRQPPLSSLRQSALVAAENRMKRESL 3
           ELMAKGITGTG+GFDLPG+RLGGFSRQPP+SSLRQ+AL AAE R +  SL
Sbjct: 121 ELMAKGITGTGEGFDLPGRRLGGFSRQPPVSSLRQTALAAAEKRARLGSL 170


>emb|CAN76517.1| hypothetical protein VITISV_033675 [Vitis vinifera]
          Length = 354

 Score =  275 bits (702), Expect = 8e-72
 Identities = 127/166 (76%), Positives = 148/166 (89%)
 Frame = -2

Query: 512 MDLNDLNKVWEVKPLKKVRENEAKEILEKVAKQVQPIMRKRRWKVQILYEFCPANPSLLG 333
           M+L DLNKVWEV+PLKK  E+EA++ILE+VAK VQPIMRK +W+V++L EFCP NP+LLG
Sbjct: 1   MNLGDLNKVWEVRPLKKAGEDEARKILERVAKHVQPIMRKHKWRVKLLSEFCPNNPALLG 60

Query: 332 LNVGGGAEVKLRLRRPNNELDFLPYNQILDTMLHELCHNEHGPHNSDFYNLLDEIRKDCE 153
           LNVGGG  VKLRLRRPN + DF P++QILDTMLHELCHN HGPHN+DFY L DEIRK+CE
Sbjct: 61  LNVGGGIHVKLRLRRPNRDWDFFPFDQILDTMLHELCHNVHGPHNADFYKLWDEIRKECE 120

Query: 152 ELMAKGITGTGQGFDLPGKRLGGFSRQPPLSSLRQSALVAAENRMK 15
           ELMAKGITGTG+GFDLPG+RLGGFSRQPP+SSLRQ+AL AAE R +
Sbjct: 121 ELMAKGITGTGEGFDLPGRRLGGFSRQPPVSSLRQTALAAAEKRAR 166


>ref|XP_002317357.1| predicted protein [Populus trichocarpa] gi|222860422|gb|EEE97969.1|
           predicted protein [Populus trichocarpa]
          Length = 388

 Score =  259 bits (663), Expect = 3e-67
 Identities = 121/170 (71%), Positives = 145/170 (85%)
 Frame = -2

Query: 512 MDLNDLNKVWEVKPLKKVRENEAKEILEKVAKQVQPIMRKRRWKVQILYEFCPANPSLLG 333
           M+L+DLNKVWE+K LKK  E EA+ +L+K+AKQVQPIMRK  W+V++L EFCP N SLLG
Sbjct: 1   MNLSDLNKVWEIKALKKPGEEEARRMLDKIAKQVQPIMRKHNWRVKLLSEFCPNNRSLLG 60

Query: 332 LNVGGGAEVKLRLRRPNNELDFLPYNQILDTMLHELCHNEHGPHNSDFYNLLDEIRKDCE 153
           LNVGGG  VKLRLRRPN +LDF P++Q+LDTMLHELCHN HGPHN++FY L DE+RK+CE
Sbjct: 61  LNVGGGVHVKLRLRRPNRDLDFFPFHQVLDTMLHELCHNVHGPHNANFYKLWDELRKECE 120

Query: 152 ELMAKGITGTGQGFDLPGKRLGGFSRQPPLSSLRQSALVAAENRMKRESL 3
           EL+ KGITGTG+GFDLPG+RLGGFS QP LSSLR++AL AAE R K  S+
Sbjct: 121 ELIFKGITGTGEGFDLPGRRLGGFSCQPALSSLRKTALAAAEKRAKLGSM 170


Top