BLASTX nr result

ID: Panax21_contig00020870 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00020870
         (810 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276294.1| PREDICTED: uncharacterized protein LOC100250...    92   1e-16
ref|XP_002301980.1| predicted protein [Populus trichocarpa] gi|2...    88   3e-15
ref|XP_002510523.1| nucleic acid binding protein, putative [Rici...    87   6e-15
ref|XP_004162557.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...    79   1e-12
ref|XP_004136493.1| PREDICTED: uncharacterized protein LOC101222...    79   1e-12

>ref|XP_002276294.1| PREDICTED: uncharacterized protein LOC100250572 [Vitis vinifera]
          Length = 419

 Score = 92.0 bits (227), Expect = 1e-16
 Identities = 65/141 (46%), Positives = 70/141 (49%), Gaps = 2/141 (1%)
 Frame = +2

Query: 80  SATLLF-YSQALLFMALLSFLPETSPDAXXXXXXXXXXXXXXXXXXXXXXXWDQIXXXXX 256
           SATLLF Y   LLFMALL+FLPE S                          W+QI     
Sbjct: 7   SATLLFFYLLGLLFMALLTFLPEASET----NTKKQQPSKRKRKQQKQPSSWNQIKNLLT 62

Query: 257 XXXXXXXXXXXXXXXXXXXXXXXXXXXSVGYSKL-SSCSSICTFRDVVHGNTRVVHRPDY 433
                                        GYSKL SSC SIC+FRDVVHGNTRVVHR D 
Sbjct: 63  CKQIEGSQVHDPSKNPG------------GYSKLGSSCGSICSFRDVVHGNTRVVHRADN 110

Query: 434 SPESSTVGSETGLLRRKTVNG 496
           SPESS+VG ETGLL RKTV+G
Sbjct: 111 SPESSSVGQETGLLSRKTVSG 131



 Score = 68.2 bits (165), Expect = 2e-09
 Identities = 32/44 (72%), Positives = 36/44 (81%)
 Frame = +3

Query: 678 SSXMRSNGDGTYKSASRGMQFRKLSGCYECHMAHMIVDPSRYPT 809
           SS +RSN   TY S+SRGMQFRKLSGCYEC   HMIVDP+RYP+
Sbjct: 140 SSSVRSNASATYTSSSRGMQFRKLSGCYEC---HMIVDPNRYPS 180


>ref|XP_002301980.1| predicted protein [Populus trichocarpa] gi|222843706|gb|EEE81253.1|
           predicted protein [Populus trichocarpa]
          Length = 405

 Score = 87.8 bits (216), Expect = 3e-15
 Identities = 47/76 (61%), Positives = 57/76 (75%), Gaps = 1/76 (1%)
 Frame = +2

Query: 341 VGYSKL-SSCSSICTFRDVVHGNTRVVHRPDYSPESSTVGSETGLLRRKTVNGXXXXXXX 517
           +GYSKL SSCSSIC+F+DVVHGNTRVVHR D SPESST+G ETGLL RK V+        
Sbjct: 63  IGYSKLGSSCSSICSFKDVVHGNTRVVHRADNSPESSTLGQETGLLSRKGVS-------- 114

Query: 518 XXLTGANTTTSMRSNG 565
              TG+++T S+ S+G
Sbjct: 115 ---TGSSSTRSLTSSG 127



 Score = 63.2 bits (152), Expect = 7e-08
 Identities = 35/55 (63%), Positives = 39/55 (70%)
 Frame = +3

Query: 645 SVPETTQESLGSSXMRSNGDGTYKSASRGMQFRKLSGCYECHMAHMIVDPSRYPT 809
           S   ++  SL SS  RSN   T  S+SRGMQFRKLSGCYEC   HMIVDPSRYP+
Sbjct: 114 STGSSSTRSLTSSG-RSNSGVTCSSSSRGMQFRKLSGCYEC---HMIVDPSRYPS 164


>ref|XP_002510523.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223551224|gb|EEF52710.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 406

 Score = 86.7 bits (213), Expect = 6e-15
 Identities = 42/54 (77%), Positives = 46/54 (85%), Gaps = 1/54 (1%)
 Frame = +2

Query: 338 SVGYSKL-SSCSSICTFRDVVHGNTRVVHRPDYSPESSTVGSETGLLRRKTVNG 496
           ++GYSKL SSCSSIC+FRD+VHGNTRVVHR D SPESSTVG ETGLL RK   G
Sbjct: 61  NIGYSKLGSSCSSICSFRDIVHGNTRVVHRADNSPESSTVGQETGLLSRKATGG 114



 Score = 63.9 bits (154), Expect = 4e-08
 Identities = 35/53 (66%), Positives = 39/53 (73%), Gaps = 3/53 (5%)
 Frame = +3

Query: 657 TTQESLGSSXMRSNGDGTYKS---ASRGMQFRKLSGCYECHMAHMIVDPSRYP 806
           ++  +LG S  RSNG  TY S   +SRGMQFRKLSGCYEC   HMIVDPSRYP
Sbjct: 115 SSTRTLGGSG-RSNGGATYSSHVSSSRGMQFRKLSGCYEC---HMIVDPSRYP 163


>ref|XP_004162557.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC101231096 [Cucumis sativus]
          Length = 424

 Score = 79.0 bits (193), Expect = 1e-12
 Identities = 40/54 (74%), Positives = 44/54 (81%), Gaps = 1/54 (1%)
 Frame = +2

Query: 338 SVGYSKL-SSCSSICTFRDVVHGNTRVVHRPDYSPESSTVGSETGLLRRKTVNG 496
           S  YSKL SSCSSIC+FRDVVHGN +VVHR D SPESS+VG ET LL RK+ NG
Sbjct: 61  SPAYSKLGSSCSSICSFRDVVHGNAKVVHRADNSPESSSVGQETRLLTRKSANG 114


>ref|XP_004136493.1| PREDICTED: uncharacterized protein LOC101222539 [Cucumis sativus]
          Length = 423

 Score = 79.0 bits (193), Expect = 1e-12
 Identities = 40/54 (74%), Positives = 44/54 (81%), Gaps = 1/54 (1%)
 Frame = +2

Query: 338 SVGYSKL-SSCSSICTFRDVVHGNTRVVHRPDYSPESSTVGSETGLLRRKTVNG 496
           S  YSKL SSCSSIC+FRDVVHGN +VVHR D SPESS+VG ET LL RK+ NG
Sbjct: 61  SPAYSKLGSSCSSICSFRDVVHGNAKVVHRADNSPESSSVGQETRLLTRKSANG 114


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