BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00020862
         (1012 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAR13317.1| gag-pol polyprotein [Phaseolus vulgaris]                81   5e-13
dbj|BAK61840.1| gag-pol polyprotein [Citrus unshiu]                    77   9e-12
emb|CAC33017.1| hypothetical protein [Antirrhinum hispanicum]          76   1e-11
gb|ABW81018.1| gag-pol polymerase [Arabidopsis lyrata subsp. lyr...    75   3e-11
gb|AAD20433.1| putative retroelement pol polyprotein [Arabidopsi...    72   3e-10

>gb|AAR13317.1| gag-pol polyprotein [Phaseolus vulgaris]
          Length = 1859

 Score = 80.9 bits (198), Expect = 5e-13
 Identities = 50/157 (31%), Positives = 85/157 (54%), Gaps = 1/157 (0%)
 Frame = +3

Query: 222  WSAIKPSEPIKLHDGVLVIITRVGSVDMKRIMVDNGSSIDILFLHA*QMMDLEGRKMEIG 401
            ++AI PS+     D  +VI   +    + +++VD GSS+DIL+    + M +   +++  
Sbjct: 629  FTAIDPSQ-----DDPMVITVEIDKFAIAKVLVDQGSSVDILYWETFKKMKIPEAEIQPY 683

Query: 402  QEPPLYGFSNNPV*VAGVIELSVIFGTTPLQMEVICKFFMVHVDSSYNVILGRLTLMALQ 581
             E  + GFS   V   G I+L   FG   L   +  ++ +V+ ++SYN++LGR ++  L+
Sbjct: 684  NEQ-IVGFSRERVDTKGFIDLYTTFGDDYLSKTINIRYLLVNANTSYNILLGRPSINRLK 742

Query: 582  AMTSIPHFKIKFSTPN-DVDEVVGDLDLARRCYQNAL 689
            A+ S PH  +KF + N D+  V  D   AR CY  +L
Sbjct: 743  AIVSTPHLAMKFPSVNGDIATVHIDQKTARECYVASL 779


>dbj|BAK61840.1| gag-pol polyprotein [Citrus unshiu]
          Length = 1542

 Score = 76.6 bits (187), Expect = 9e-12
 Identities = 48/144 (33%), Positives = 72/144 (50%)
 Frame = +3

Query: 255 LHDGVLVIITRVGSVDMKRIMVDNGSSIDILFLHA*QMMDLEGRKMEIGQEPPLYGFSNN 434
           LH+  LVI   V +++++RI+VD GSS+DILF  A   M +   K+E      L GF   
Sbjct: 547 LHEDALVIKAMVAAIELRRILVDTGSSVDILFKSALDDMGISDLKLE-RTNTSLKGFGGG 605

Query: 435 PV*VAGVIELSVIFGTTPLQMEVICKFFMVHVDSSYNVILGRLTLMALQAMTSIPHFKIK 614
            +   G+ EL +  G+ P +  V+  F +V   S Y +ILGR  +   Q + S  +  +K
Sbjct: 606 RLTPMGINELPITVGSKPFERIVMLYFVVVEERSPYQMILGRPFIRISQCVISTHYLALK 665

Query: 615 FSTPNDVDEVVGDLDLARRCYQNA 686
           +     V  V G   + R CY  A
Sbjct: 666 YRVNGVVGVVKGVQKMTRSCYATA 689


>emb|CAC33017.1| hypothetical protein [Antirrhinum hispanicum]
          Length = 1455

 Score = 75.9 bits (185), Expect = 1e-11
 Identities = 43/147 (29%), Positives = 79/147 (53%), Gaps = 1/147 (0%)
 Frame = +3

Query: 258 HDGVLVIITRVGSVDMKRIMVDNGSSIDILFLHA*QMMDLEGRKMEIGQEPPLYGFSNNP 437
           HD  ++I   +    + R+++D GSS+D++FL     + L+  ++ + +  PL GF  + 
Sbjct: 484 HDDPIIIQATIHGAKVSRVLIDTGSSVDVMFLPTFLALGLKIEQI-VPETTPLVGFDGST 542

Query: 438 V*VAGVIELSVIFGTTPLQMEVICKFFMVH-VDSSYNVILGRLTLMALQAMTSIPHFKIK 614
               G I L + +G   L+     +F++++ +  +YNVI GR +L   +A+ S+ H K+K
Sbjct: 543 SETLGSIPLLMSWGRGHLRRTKEIRFWIINALAKTYNVICGRPSLCLFEAVPSVLHLKVK 602

Query: 615 FSTPNDVDEVVGDLDLARRCYQNALVS 695
           F   N + EV G+   AR C  N + +
Sbjct: 603 FPANNGIGEVKGNQARARECRLNTMAA 629


>gb|ABW81018.1| gag-pol polymerase [Arabidopsis lyrata subsp. lyrata]
          Length = 672

 Score = 74.7 bits (182), Expect = 3e-11
 Identities = 45/140 (32%), Positives = 75/140 (53%)
 Frame = +3

Query: 258 HDGVLVIITRVGSVDMKRIMVDNGSSIDILFLHA*QMMDLEGRKMEIGQEPPLYGFSNNP 437
           HD  LVI   V + ++ RI++D GSS+D++FL   + M +  R   +G   PL  F++  
Sbjct: 529 HDDALVITLDVANFEVSRILIDTGSSVDLIFLSTLEKMGIS-RGDIVGPPSPLVAFTSES 587

Query: 438 V*VAGVIELSVIFGTTPLQMEVICKFFMVHVDSSYNVILGRLTLMALQAMTSIPHFKIKF 617
               G I+L V+      ++  I  F +    ++YN+ILG   +  ++A+ S  +  IKF
Sbjct: 588 AMSLGTIKLPVL----AKKVSKIVDFVVFDKPAAYNIILGTPWIYRMKAVPSTYYQCIKF 643

Query: 618 STPNDVDEVVGDLDLARRCY 677
            T N V+ + GD + +R CY
Sbjct: 644 PTSNGVETIRGDQEASRTCY 663


>gb|AAD20433.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 889

 Score = 71.6 bits (174), Expect = 3e-10
 Identities = 60/194 (30%), Positives = 92/194 (47%), Gaps = 3/194 (1%)
 Frame = +3

Query: 252 KLHDGVLVIITRVGSVDMKRIMVDNGSSIDILFLHA*QMMDLEGRKMEIGQEPPLYGFSN 431
           K HD  LVI   VG+ ++  IMVD GSS+D+LF  A +       K++ G++ PL GF+ 
Sbjct: 59  KPHDDALVIRIDVGNYELSCIMVDTGSSVDVLFYDAFKRTGHLDSKLQ-GRKTPLTGFAG 117

Query: 432 NPV*VAGVIELSVIFGTTPLQMEVICKFFMVHVDSSYNVILGRLTLMALQAMTSIPHFKI 611
           +     G I+L     T    +  +  F +V   + +N ILGR  L  ++A+ S  H  I
Sbjct: 118 DTTFSIGTIQLP----TIARGVRQLTNFLVVDKKAPFNAILGRPWLHVMKAVPSTYHQCI 173

Query: 612 KFSTPNDVDEVVGDLDLARRCYQNA---LVSSRL*VNMQRDQTKEVRV*SVEVRNLSILS 782
           KF +   +  V G    +R+CY  +   +  +   V M  D+  E++     VR+L    
Sbjct: 174 KFPSYKGIAVVYGSQRSSRKCYMGSYEDIKKADPVVLMIEDELAEMKT----VRSLDPSQ 229

Query: 783 NGLYKSQKH*ACWD 824
            G  KS     C D
Sbjct: 230 RGTRKSLITQVCID 243