BLASTX nr result
ID: Panax21_contig00020859
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00020859 (429 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002519806.1| serine hydroxymethyltransferase, putative [R... 163 2e-38 ref|NP_001238335.1| serine hydroxymethyltransferase 4 [Glycine m... 160 8e-38 ref|XP_002277146.1| PREDICTED: serine hydroxymethyltransferase, ... 159 3e-37 gb|ABO61383.1| plastid serine hydroxymethyltransferase [Populus ... 157 7e-37 ref|XP_003546061.1| PREDICTED: LOW QUALITY PROTEIN: serine hydro... 157 1e-36 >ref|XP_002519806.1| serine hydroxymethyltransferase, putative [Ricinus communis] gi|223541045|gb|EEF42602.1| serine hydroxymethyltransferase, putative [Ricinus communis] Length = 527 Score = 163 bits (412), Expect = 2e-38 Identities = 89/142 (62%), Positives = 104/142 (73%) Frame = -3 Query: 427 MMGSLQQSIWMKGSSPFPPKGSVVGFPPQVKLSSSISPGRCYSQLEASLITGRXXXXXXX 248 +MGSLQQ +W+KGSS + + VGFP Q+KL+S P R Y ++ SL+ GR Sbjct: 9 VMGSLQQPVWIKGSSLPLKQSNFVGFPHQIKLNS-FRPCR-YLNIQGSLVAGRPPSSVS- 65 Query: 247 XXPAAEIGGEGRSFKDNALSEVDPEVRALIDKEKQRQFRCLELIASENFTSRAVMEAVGS 68 EI G+ SFKD LSE DPEVR +I+KEK RQF+ LELIASENFTSRAVMEAVGS Sbjct: 66 ---VPEIEGDRSSFKDYGLSEADPEVREIIEKEKNRQFKSLELIASENFTSRAVMEAVGS 122 Query: 67 CLTNKYSEGLPGKRYYGGNEYI 2 CLTNKYSEGLPGKRYYGGNE+I Sbjct: 123 CLTNKYSEGLPGKRYYGGNEHI 144 >ref|NP_001238335.1| serine hydroxymethyltransferase 4 [Glycine max] gi|222142535|gb|ACM45954.1| serine hydroxymethyltransferase 4 [Glycine max] Length = 536 Score = 160 bits (406), Expect = 8e-38 Identities = 94/144 (65%), Positives = 105/144 (72%), Gaps = 3/144 (2%) Frame = -3 Query: 424 MGSLQQS-IWMKGSSPFPPKG--SVVGFPPQVKLSSSISPGRCYSQLEASLITGRXXXXX 254 M SLQQ IW KG + FP KG S GF PQV+ + I P + S +EASL+TG+ Sbjct: 7 MSSLQQQPIWTKGLN-FPAKGYGSNNGFLPQVRFCN-IKPSKA-SHVEASLVTGKPSSVP 63 Query: 253 XXXXPAAEIGGEGRSFKDNALSEVDPEVRALIDKEKQRQFRCLELIASENFTSRAVMEAV 74 EIGG+G SF D LSE DP+VRA+IDKEK RQF+ LELIASENFTSRAVMEAV Sbjct: 64 FS---VPEIGGDGSSFLDYGLSEADPDVRAIIDKEKDRQFKSLELIASENFTSRAVMEAV 120 Query: 73 GSCLTNKYSEGLPGKRYYGGNEYI 2 GSCLTNKYSEGLPGKRYYGGNEYI Sbjct: 121 GSCLTNKYSEGLPGKRYYGGNEYI 144 >ref|XP_002277146.1| PREDICTED: serine hydroxymethyltransferase, mitochondrial [Vitis vinifera] gi|296081614|emb|CBI20619.3| unnamed protein product [Vitis vinifera] Length = 528 Score = 159 bits (401), Expect = 3e-37 Identities = 91/142 (64%), Positives = 105/142 (73%), Gaps = 1/142 (0%) Frame = -3 Query: 424 MGSLQQSIWMKGSSPFPPKGSVV-GFPPQVKLSSSISPGRCYSQLEASLITGRXXXXXXX 248 MGSLQQ IW+KGSS F P GS V GFP Q+KL+S + P C S ++ SL+TG+ Sbjct: 10 MGSLQQPIWIKGSS-FAPNGSTVNGFPHQIKLNS-VKP--CRSYIKGSLVTGKPPSSVSV 65 Query: 247 XXPAAEIGGEGRSFKDNALSEVDPEVRALIDKEKQRQFRCLELIASENFTSRAVMEAVGS 68 P G G +F D+ L+E DPEV A+I KEKQRQ + LELIASENFTSRAVMEAVGS Sbjct: 66 TVPGN--GDSGVNFIDHGLNEADPEVCAIIYKEKQRQMKSLELIASENFTSRAVMEAVGS 123 Query: 67 CLTNKYSEGLPGKRYYGGNEYI 2 CLTNKYSEGLPGKRYYGGNE+I Sbjct: 124 CLTNKYSEGLPGKRYYGGNEFI 145 >gb|ABO61383.1| plastid serine hydroxymethyltransferase [Populus tremuloides] Length = 529 Score = 157 bits (398), Expect = 7e-37 Identities = 94/143 (65%), Positives = 104/143 (72%), Gaps = 1/143 (0%) Frame = -3 Query: 427 MMGSLQQSIWMKGSSPFPPKGSVV-GFPPQVKLSSSISPGRCYSQLEASLITGRXXXXXX 251 +MGSLQQ + KG + FP K SV+ GFP QVKL+S + P R S LE SL+TGR Sbjct: 9 VMGSLQQPVLSKGPA-FPMKRSVIIGFPYQVKLNS-VKPCRA-SSLEGSLVTGRPPSSVS 65 Query: 250 XXXPAAEIGGEGRSFKDNALSEVDPEVRALIDKEKQRQFRCLELIASENFTSRAVMEAVG 71 P E G + SFKD LSE DPEV +I KEK RQF+ LELIASENFTSRAVMEAVG Sbjct: 66 VPIP--ETGADISSFKDYGLSEADPEVLEIIKKEKDRQFKSLELIASENFTSRAVMEAVG 123 Query: 70 SCLTNKYSEGLPGKRYYGGNEYI 2 SCLTNKYSEGLPGKRYYGGNEYI Sbjct: 124 SCLTNKYSEGLPGKRYYGGNEYI 146 >ref|XP_003546061.1| PREDICTED: LOW QUALITY PROTEIN: serine hydroxymethyltransferase, mitochondrial-like [Glycine max] Length = 536 Score = 157 bits (396), Expect = 1e-36 Identities = 92/145 (63%), Positives = 104/145 (71%), Gaps = 3/145 (2%) Frame = -3 Query: 427 MMGSLQQS-IWMKGSSPFPPKG--SVVGFPPQVKLSSSISPGRCYSQLEASLITGRXXXX 257 MM SLQQ IW KG + FP KG S GF Q++ + I P + S +EASL+ G+ Sbjct: 6 MMSSLQQQPIWTKGLN-FPAKGYGSNNGFVTQLRFCN-IKPSKA-SHVEASLVAGKPSSV 62 Query: 256 XXXXXPAAEIGGEGRSFKDNALSEVDPEVRALIDKEKQRQFRCLELIASENFTSRAVMEA 77 EIGG+G SF D LSE DPEVRA+IDKEK RQF+ LELIASENFTSRAVMEA Sbjct: 63 SFS---VPEIGGDGSSFLDYGLSEADPEVRAIIDKEKDRQFKSLELIASENFTSRAVMEA 119 Query: 76 VGSCLTNKYSEGLPGKRYYGGNEYI 2 VGSCLTNKYSEGLPG+RYYGGNEYI Sbjct: 120 VGSCLTNKYSEGLPGRRYYGGNEYI 144