BLASTX nr result
ID: Panax21_contig00020854
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00020854
(570 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002521839.1| brg-1 associated factor, putative [Ricinus c... 141 8e-32
ref|XP_002522329.1| Upstream activation factor subunit UAF30, pu... 141 8e-32
emb|CAN83123.1| hypothetical protein VITISV_044372 [Vitis vinifera] 130 2e-28
ref|XP_004170902.1| PREDICTED: uncharacterized protein LOC101226... 130 2e-28
ref|XP_004148436.1| PREDICTED: upstream activation factor subuni... 130 2e-28
>ref|XP_002521839.1| brg-1 associated factor, putative [Ricinus communis]
gi|223538877|gb|EEF40475.1| brg-1 associated factor,
putative [Ricinus communis]
Length = 614
Score = 141 bits (355), Expect = 8e-32
Identities = 67/78 (85%), Positives = 73/78 (93%)
Frame = +2
Query: 2 PLPLSDALVKFIGTGENALSRADVVKRMWQYIKQNDLQDPTDKRRIICDDKLKELFDVDT 181
PLPLSD LVKFIGTGEN LSRADVVKR+W YIKQNDLQDP+DKRRI+CDDKLKELF+VD+
Sbjct: 536 PLPLSDPLVKFIGTGENELSRADVVKRIWGYIKQNDLQDPSDKRRILCDDKLKELFEVDS 595
Query: 182 FNGFMVTKLLTAHFIKAE 235
FNGF V+KLLTAHFIK E
Sbjct: 596 FNGFSVSKLLTAHFIKME 613
Score = 74.7 bits (182), Expect = 1e-11
Identities = 35/70 (50%), Positives = 51/70 (72%)
Frame = +2
Query: 11 LSDALVKFIGTGENALSRADVVKRMWQYIKQNDLQDPTDKRRIICDDKLKELFDVDTFNG 190
LS L +F TGE+ L+R +VVK++W YI++N+LQDP +KR I+CD+ L+ LF VD N
Sbjct: 422 LSPQLQEF--TGESELARTEVVKKLWIYIRENNLQDPKNKRNILCDESLRTLFRVDCINM 479
Query: 191 FMVTKLLTAH 220
F + K+L+ H
Sbjct: 480 FQMNKVLSKH 489
Score = 72.4 bits (176), Expect = 5e-11
Identities = 34/70 (48%), Positives = 50/70 (71%)
Frame = +2
Query: 11 LSDALVKFIGTGENALSRADVVKRMWQYIKQNDLQDPTDKRRIICDDKLKELFDVDTFNG 190
LS L KF+G E L+R +VVK++W YI++NDLQDP ++R I CD+ L++LF V++ N
Sbjct: 125 LSPQLHKFVGVSE--LARTEVVKKLWAYIRENDLQDPKNRRIIKCDEALRDLFRVNSINM 182
Query: 191 FMVTKLLTAH 220
F + K L+ H
Sbjct: 183 FQMNKALSKH 192
Score = 71.2 bits (173), Expect = 1e-10
Identities = 33/70 (47%), Positives = 51/70 (72%)
Frame = +2
Query: 11 LSDALVKFIGTGENALSRADVVKRMWQYIKQNDLQDPTDKRRIICDDKLKELFDVDTFNG 190
LS L +FIG ++A R +VVK++W YI++N+LQDP ++R I+CD+ L+ LF VD+ N
Sbjct: 273 LSPQLQEFIGESKSA--RTEVVKKLWVYIRENNLQDPKNRRIILCDESLRALFRVDSINM 330
Query: 191 FMVTKLLTAH 220
F + K+L+ H
Sbjct: 331 FQMNKVLSKH 340
>ref|XP_002522329.1| Upstream activation factor subunit UAF30, putative [Ricinus
communis] gi|223538407|gb|EEF40013.1| Upstream
activation factor subunit UAF30, putative [Ricinus
communis]
Length = 322
Score = 141 bits (355), Expect = 8e-32
Identities = 65/76 (85%), Positives = 73/76 (96%)
Frame = +2
Query: 2 PLPLSDALVKFIGTGENALSRADVVKRMWQYIKQNDLQDPTDKRRIICDDKLKELFDVDT 181
PL LSDAL+KF GTGENALSRADV+KRMW+YIKQN+LQDP+DKRRIICD+KLKELFDVDT
Sbjct: 246 PLQLSDALIKFFGTGENALSRADVIKRMWEYIKQNNLQDPSDKRRIICDEKLKELFDVDT 305
Query: 182 FNGFMVTKLLTAHFIK 229
FNGF VTKLL+AHF+K
Sbjct: 306 FNGFTVTKLLSAHFVK 321
Score = 63.2 bits (152), Expect = 3e-08
Identities = 26/60 (43%), Positives = 42/60 (70%)
Frame = +2
Query: 41 TGENALSRADVVKRMWQYIKQNDLQDPTDKRRIICDDKLKELFDVDTFNGFMVTKLLTAH 220
TG L+R +VVK++W +I++ LQDP ++R IICD+ + LF VD+ + F + K+L+ H
Sbjct: 138 TGVPQLARTEVVKQLWSHIREKKLQDPNNRRNIICDEPFRALFGVDSIDMFQMNKVLSKH 197
>emb|CAN83123.1| hypothetical protein VITISV_044372 [Vitis vinifera]
Length = 332
Score = 130 bits (327), Expect = 2e-28
Identities = 61/78 (78%), Positives = 72/78 (92%)
Frame = +2
Query: 2 PLPLSDALVKFIGTGENALSRADVVKRMWQYIKQNDLQDPTDKRRIICDDKLKELFDVDT 181
PLPLSDALVKF+ E+ALSRA+VVK++W+YIKQN+LQDP+DKRRIICD+KLKELFDVD+
Sbjct: 254 PLPLSDALVKFLNIEESALSRAEVVKKIWEYIKQNNLQDPSDKRRIICDEKLKELFDVDS 313
Query: 182 FNGFMVTKLLTAHFIKAE 235
FNGF V KLL+AHFIK E
Sbjct: 314 FNGFTVPKLLSAHFIKTE 331
Score = 72.8 bits (177), Expect = 4e-11
Identities = 35/70 (50%), Positives = 49/70 (70%)
Frame = +2
Query: 11 LSDALVKFIGTGENALSRADVVKRMWQYIKQNDLQDPTDKRRIICDDKLKELFDVDTFNG 190
LS L KFIG E L+R +VVK++W +I++ DLQDP ++R IICD+ L+ LF VD+ N
Sbjct: 139 LSPELQKFIGVPE--LARTEVVKQLWVHIREKDLQDPNNRRNIICDETLRALFGVDSINM 196
Query: 191 FMVTKLLTAH 220
F + K L+ H
Sbjct: 197 FQMNKALSKH 206
>ref|XP_004170902.1| PREDICTED: uncharacterized protein LOC101226406, partial [Cucumis
sativus]
Length = 225
Score = 130 bits (326), Expect = 2e-28
Identities = 60/76 (78%), Positives = 70/76 (92%)
Frame = +2
Query: 2 PLPLSDALVKFIGTGENALSRADVVKRMWQYIKQNDLQDPTDKRRIICDDKLKELFDVDT 181
PLPLS+ALV F+GTGE+AL R+DVVKRMW YIKQN+LQDP+DKRRIICD++LKELFDVD+
Sbjct: 147 PLPLSNALVAFLGTGEDALPRSDVVKRMWDYIKQNNLQDPSDKRRIICDERLKELFDVDS 206
Query: 182 FNGFMVTKLLTAHFIK 229
FNGF V+KLL HFIK
Sbjct: 207 FNGFTVSKLLATHFIK 222
Score = 70.5 bits (171), Expect = 2e-10
Identities = 32/70 (45%), Positives = 51/70 (72%)
Frame = +2
Query: 11 LSDALVKFIGTGENALSRADVVKRMWQYIKQNDLQDPTDKRRIICDDKLKELFDVDTFNG 190
LS L +FIG E ++R +VVK++W +I++N+LQDP+++R I+CD+ LK LF V++ N
Sbjct: 17 LSPQLQEFIGAPE--MARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALFGVNSINM 74
Query: 191 FMVTKLLTAH 220
F + K L+ H
Sbjct: 75 FQMNKALSKH 84
>ref|XP_004148436.1| PREDICTED: upstream activation factor subunit UAF30-like [Cucumis
sativus]
Length = 332
Score = 130 bits (326), Expect = 2e-28
Identities = 60/76 (78%), Positives = 70/76 (92%)
Frame = +2
Query: 2 PLPLSDALVKFIGTGENALSRADVVKRMWQYIKQNDLQDPTDKRRIICDDKLKELFDVDT 181
PLPLS+ALV F+GTGE+AL R+DVVKRMW YIKQN+LQDP+DKRRIICD++LKELFDVD+
Sbjct: 254 PLPLSNALVAFLGTGEDALPRSDVVKRMWDYIKQNNLQDPSDKRRIICDERLKELFDVDS 313
Query: 182 FNGFMVTKLLTAHFIK 229
FNGF V+KLL HFIK
Sbjct: 314 FNGFTVSKLLATHFIK 329
Score = 70.5 bits (171), Expect = 2e-10
Identities = 32/70 (45%), Positives = 51/70 (72%)
Frame = +2
Query: 11 LSDALVKFIGTGENALSRADVVKRMWQYIKQNDLQDPTDKRRIICDDKLKELFDVDTFNG 190
LS L +FIG E ++R +VVK++W +I++N+LQDP+++R I+CD+ LK LF V++ N
Sbjct: 124 LSPQLQEFIGAPE--MARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALFGVNSINM 181
Query: 191 FMVTKLLTAH 220
F + K L+ H
Sbjct: 182 FQMNKALSKH 191