BLASTX nr result

ID: Panax21_contig00020844 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00020844
         (499 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274426.1| PREDICTED: WD repeat domain-containing prote...   103   1e-20
emb|CAN65101.1| hypothetical protein VITISV_039726 [Vitis vinifera]   103   1e-20
ref|XP_004157881.1| PREDICTED: WD repeat domain-containing prote...   102   3e-20
ref|XP_004141980.1| PREDICTED: WD repeat domain-containing prote...   102   3e-20
ref|XP_002530063.1| WD-repeat protein, putative [Ricinus communi...   100   2e-19

>ref|XP_002274426.1| PREDICTED: WD repeat domain-containing protein 83 [Vitis vinifera]
           gi|297743030|emb|CBI35897.3| unnamed protein product
           [Vitis vinifera]
          Length = 299

 Score =  103 bits (257), Expect = 1e-20
 Identities = 48/52 (92%), Positives = 50/52 (96%)
 Frame = -1

Query: 499 EDGSVFFWDLVDASVVSSFRAHSSVVTSVSYHPKDSCMITASVDGTIRVWKT 344
           EDG +FFWDLVDASVVSSFRAH+SVVTSVSYHPKD CMITASVDGTIRVWKT
Sbjct: 248 EDGFIFFWDLVDASVVSSFRAHASVVTSVSYHPKDDCMITASVDGTIRVWKT 299


>emb|CAN65101.1| hypothetical protein VITISV_039726 [Vitis vinifera]
          Length = 264

 Score =  103 bits (257), Expect = 1e-20
 Identities = 48/52 (92%), Positives = 50/52 (96%)
 Frame = -1

Query: 499 EDGSVFFWDLVDASVVSSFRAHSSVVTSVSYHPKDSCMITASVDGTIRVWKT 344
           EDG +FFWDLVDASVVSSFRAH+SVVTSVSYHPKD CMITASVDGTIRVWKT
Sbjct: 213 EDGFIFFWDLVDASVVSSFRAHASVVTSVSYHPKDDCMITASVDGTIRVWKT 264


>ref|XP_004157881.1| PREDICTED: WD repeat domain-containing protein 83-like, partial
           [Cucumis sativus]
          Length = 122

 Score =  102 bits (254), Expect = 3e-20
 Identities = 48/52 (92%), Positives = 49/52 (94%)
 Frame = -1

Query: 499 EDGSVFFWDLVDASVVSSFRAHSSVVTSVSYHPKDSCMITASVDGTIRVWKT 344
           EDG V+FWDLVDASVVS FRAHSSVVTSVSYHPKD CMITASVDGTIRVWKT
Sbjct: 71  EDGFVYFWDLVDASVVSKFRAHSSVVTSVSYHPKDKCMITASVDGTIRVWKT 122


>ref|XP_004141980.1| PREDICTED: WD repeat domain-containing protein 83-like [Cucumis
           sativus]
          Length = 299

 Score =  102 bits (254), Expect = 3e-20
 Identities = 48/52 (92%), Positives = 49/52 (94%)
 Frame = -1

Query: 499 EDGSVFFWDLVDASVVSSFRAHSSVVTSVSYHPKDSCMITASVDGTIRVWKT 344
           EDG V+FWDLVDASVVS FRAHSSVVTSVSYHPKD CMITASVDGTIRVWKT
Sbjct: 248 EDGFVYFWDLVDASVVSKFRAHSSVVTSVSYHPKDKCMITASVDGTIRVWKT 299


>ref|XP_002530063.1| WD-repeat protein, putative [Ricinus communis]
           gi|223530416|gb|EEF32303.1| WD-repeat protein, putative
           [Ricinus communis]
          Length = 241

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 45/52 (86%), Positives = 51/52 (98%)
 Frame = -1

Query: 499 EDGSVFFWDLVDASVVSSFRAHSSVVTSVSYHPKDSCMITASVDGTIRVWKT 344
           EDG ++FWDLVDA+VVSSFRAHSSVVTSVSYHPK++CMI+ASVDGTIRVWKT
Sbjct: 190 EDGYIYFWDLVDANVVSSFRAHSSVVTSVSYHPKENCMISASVDGTIRVWKT 241


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