BLASTX nr result

ID: Panax21_contig00020843 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00020843
         (562 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003544919.1| PREDICTED: uncharacterized protein LOC100810...   236   2e-60
ref|XP_004162715.1| PREDICTED: protein TIC110, chloroplastic-lik...   236   2e-60
ref|XP_004153267.1| PREDICTED: protein TIC110, chloroplastic-lik...   236   2e-60
ref|XP_004145231.1| PREDICTED: protein TIC110, chloroplastic-lik...   236   2e-60
ref|XP_002319406.1| predicted protein [Populus trichocarpa] gi|2...   233   1e-59

>ref|XP_003544919.1| PREDICTED: uncharacterized protein LOC100810630 [Glycine max]
          Length = 996

 Score =  236 bits (602), Expect = 2e-60
 Identities = 122/161 (75%), Positives = 137/161 (85%)
 Frame = -3

Query: 560  DLDSMISLSLRESLFKKTVDEIFSSGTGEFDEEEVYQKIPQDLNINSEKARCVVRELAQS 381
            DLDSM+S +LRE+LFKKTVD+IFSSGTGEFD EEVY+KIP DLNIN EKAR VV ELA+S
Sbjct: 836  DLDSMVSENLRETLFKKTVDDIFSSGTGEFDNEEVYEKIPSDLNINKEKARGVVHELAKS 895

Query: 380  RLSNSLIQAVALLRQRNHSGVVSSLNDLLACDKAVPSKPLSWEVPEELTDLFLIYLKSEP 201
            RLSNSL+QAV+LLRQRNH GVVSSLNDLLACDKAVPS+P+SWEVPEEL DL+ IYLKS+P
Sbjct: 896  RLSNSLVQAVSLLRQRNHKGVVSSLNDLLACDKAVPSQPVSWEVPEELADLYTIYLKSDP 955

Query: 200  VPEKLSRLQCLLDIDDSTAEALQGMKD*ALPNGTAGEEFVF 78
             PE LSRLQ LL I+DSTA AL+ M D  L      E+FVF
Sbjct: 956  TPENLSRLQYLLGINDSTAAALREMGDRLLNTTAEEEKFVF 996


>ref|XP_004162715.1| PREDICTED: protein TIC110, chloroplastic-like [Cucumis sativus]
          Length = 682

 Score =  236 bits (601), Expect = 2e-60
 Identities = 123/161 (76%), Positives = 135/161 (83%)
 Frame = -3

Query: 560  DLDSMISLSLRESLFKKTVDEIFSSGTGEFDEEEVYQKIPQDLNINSEKARCVVRELAQS 381
            DLDSMIS  LRE+LFKKTVD+IFSSGTGEFDEEEVY+KIP DLNIN+EKA+ VV ELA+S
Sbjct: 522  DLDSMISERLRENLFKKTVDDIFSSGTGEFDEEEVYEKIPLDLNINAEKAKRVVHELAES 581

Query: 380  RLSNSLIQAVALLRQRNHSGVVSSLNDLLACDKAVPSKPLSWEVPEELTDLFLIYLKSEP 201
            RLSNSL+QAVAL RQRN  GVVSSLNDLLACDKAVPSKPLSW+V EEL DL+ +Y KSEP
Sbjct: 582  RLSNSLVQAVALFRQRNRQGVVSSLNDLLACDKAVPSKPLSWDVSEELADLYSVYAKSEP 641

Query: 200  VPEKLSRLQCLLDIDDSTAEALQGMKD*ALPNGTAGEEFVF 78
             PEKLSRLQ LL IDDSTA A++ M D   P G   E FVF
Sbjct: 642  TPEKLSRLQYLLGIDDSTAAAIREMGDRLQPIGAEEENFVF 682


>ref|XP_004153267.1| PREDICTED: protein TIC110, chloroplastic-like [Cucumis sativus]
          Length = 596

 Score =  236 bits (601), Expect = 2e-60
 Identities = 123/161 (76%), Positives = 135/161 (83%)
 Frame = -3

Query: 560 DLDSMISLSLRESLFKKTVDEIFSSGTGEFDEEEVYQKIPQDLNINSEKARCVVRELAQS 381
           DLDSMIS  LRE+LFKKTVD+IFSSGTGEFDEEEVY+KIP DLNIN+EKA+ VV ELA+S
Sbjct: 436 DLDSMISERLRENLFKKTVDDIFSSGTGEFDEEEVYEKIPLDLNINAEKAKRVVHELAES 495

Query: 380 RLSNSLIQAVALLRQRNHSGVVSSLNDLLACDKAVPSKPLSWEVPEELTDLFLIYLKSEP 201
           RLSNSL+QAVAL RQRN  GVVSSLNDLLACDKAVPSKPLSW+V EEL DL+ +Y KSEP
Sbjct: 496 RLSNSLVQAVALFRQRNRQGVVSSLNDLLACDKAVPSKPLSWDVSEELADLYSVYAKSEP 555

Query: 200 VPEKLSRLQCLLDIDDSTAEALQGMKD*ALPNGTAGEEFVF 78
            PEKLSRLQ LL IDDSTA A++ M D   P G   E FVF
Sbjct: 556 TPEKLSRLQYLLGIDDSTAAAIREMGDRLQPIGAEEENFVF 596


>ref|XP_004145231.1| PREDICTED: protein TIC110, chloroplastic-like [Cucumis sativus]
          Length = 1014

 Score =  236 bits (601), Expect = 2e-60
 Identities = 123/161 (76%), Positives = 135/161 (83%)
 Frame = -3

Query: 560  DLDSMISLSLRESLFKKTVDEIFSSGTGEFDEEEVYQKIPQDLNINSEKARCVVRELAQS 381
            DLDSMIS  LRE+LFKKTVD+IFSSGTGEFDEEEVY+KIP DLNIN+EKA+ VV ELA+S
Sbjct: 854  DLDSMISERLRENLFKKTVDDIFSSGTGEFDEEEVYEKIPLDLNINAEKAKRVVHELAES 913

Query: 380  RLSNSLIQAVALLRQRNHSGVVSSLNDLLACDKAVPSKPLSWEVPEELTDLFLIYLKSEP 201
            RLSNSL+QAVAL RQRN  GVVSSLNDLLACDKAVPSKPLSW+V EEL DL+ +Y KSEP
Sbjct: 914  RLSNSLVQAVALFRQRNRQGVVSSLNDLLACDKAVPSKPLSWDVSEELADLYSVYAKSEP 973

Query: 200  VPEKLSRLQCLLDIDDSTAEALQGMKD*ALPNGTAGEEFVF 78
             PEKLSRLQ LL IDDSTA A++ M D   P G   E FVF
Sbjct: 974  TPEKLSRLQYLLGIDDSTAAAIREMGDRLQPIGAEEENFVF 1014


>ref|XP_002319406.1| predicted protein [Populus trichocarpa] gi|222857782|gb|EEE95329.1|
            predicted protein [Populus trichocarpa]
          Length = 1011

 Score =  233 bits (595), Expect = 1e-59
 Identities = 120/161 (74%), Positives = 138/161 (85%)
 Frame = -3

Query: 560  DLDSMISLSLRESLFKKTVDEIFSSGTGEFDEEEVYQKIPQDLNINSEKARCVVRELAQS 381
            D +SMIS +LRE+L+KKTVDEIFSSGTGEFDEEEVY+KIP+DLNIN+EKA+ VV ELA+S
Sbjct: 851  DFNSMISENLRENLYKKTVDEIFSSGTGEFDEEEVYEKIPEDLNINAEKAKGVVHELARS 910

Query: 380  RLSNSLIQAVALLRQRNHSGVVSSLNDLLACDKAVPSKPLSWEVPEELTDLFLIYLKSEP 201
            RLSNSL+QAVALLRQRN  GVVS+LNDLLACDKAVPS+PL+WEVPEEL DL+ I++K+ P
Sbjct: 911  RLSNSLVQAVALLRQRNQQGVVSTLNDLLACDKAVPSEPLTWEVPEELADLYTIHMKNNP 970

Query: 200  VPEKLSRLQCLLDIDDSTAEALQGMKD*ALPNGTAGEEFVF 78
             PEKLSRLQ LL I DSTA AL  MKD   P G   E+FVF
Sbjct: 971  APEKLSRLQYLLGISDSTATALGEMKDRVPPVGAEEEKFVF 1011


Top