BLASTX nr result

ID: Panax21_contig00020833 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00020833
         (360 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001234831.1| TCP transcription factor 11 [Solanum lycoper...   135   3e-30
ref|XP_004135523.1| PREDICTED: transcription factor TCP8-like [C...   127   7e-28
ref|XP_003539396.1| PREDICTED: transcription factor TCP8-like [G...   126   2e-27
ref|XP_004173314.1| PREDICTED: LOW QUALITY PROTEIN: transcriptio...   125   3e-27
emb|CAN64544.1| hypothetical protein VITISV_033383 [Vitis vinifera]   124   6e-27

>ref|NP_001234831.1| TCP transcription factor 11 [Solanum lycopersicum]
           gi|306416833|gb|ADM87260.1| TCP transcription factor 11
           [Solanum lycopersicum]
          Length = 523

 Score =  135 bits (340), Expect = 3e-30
 Identities = 72/92 (78%), Positives = 77/92 (83%), Gaps = 8/92 (8%)
 Frame = -3

Query: 253 INASLAIATRSDSLTDPSKKP--STQQTQIVA------KRSTKDRHTKVDGRGRRIRMPA 98
           ++ASLAIATRSD+L DP+KK   + QQTQ V       KR TKDRHTKVDGRGRRIRMPA
Sbjct: 101 VDASLAIATRSDTLVDPNKKSQLAIQQTQPVQPQQPPPKRQTKDRHTKVDGRGRRIRMPA 160

Query: 97  TCAARVFQLTRELGHKSDGETIEWLLQQAEPA 2
            CAARVFQLTRELGHKSDGETIEWLLQQAEPA
Sbjct: 161 ACAARVFQLTRELGHKSDGETIEWLLQQAEPA 192


>ref|XP_004135523.1| PREDICTED: transcription factor TCP8-like [Cucumis sativus]
          Length = 505

 Score =  127 bits (320), Expect = 7e-28
 Identities = 67/86 (77%), Positives = 72/86 (83%), Gaps = 2/86 (2%)
 Frame = -3

Query: 253 INASLAIATRSDSLT--DPSKKPSTQQTQIVAKRSTKDRHTKVDGRGRRIRMPATCAARV 80
           ++ASL IATRSD+    DPS + ST       KRSTKDRHTKV+GRGRRIRMPATCAARV
Sbjct: 67  LDASLVIATRSDTTAAADPSPR-STSTANAANKRSTKDRHTKVEGRGRRIRMPATCAARV 125

Query: 79  FQLTRELGHKSDGETIEWLLQQAEPA 2
           FQLTRELGHKSDGETIEWLLQQAEPA
Sbjct: 126 FQLTRELGHKSDGETIEWLLQQAEPA 151


>ref|XP_003539396.1| PREDICTED: transcription factor TCP8-like [Glycine max]
          Length = 420

 Score =  126 bits (316), Expect = 2e-27
 Identities = 64/79 (81%), Positives = 68/79 (86%)
 Frame = -3

Query: 238 AIATRSDSLTDPSKKPSTQQTQIVAKRSTKDRHTKVDGRGRRIRMPATCAARVFQLTREL 59
           +IATRSD  T  +++PST       KRSTKDRHTKVDGRGRRIRMPATCAARVFQLTREL
Sbjct: 40  SIATRSDDSTKKTQQPSTN-----TKRSTKDRHTKVDGRGRRIRMPATCAARVFQLTREL 94

Query: 58  GHKSDGETIEWLLQQAEPA 2
           GHKSDGETIEWLLQQAEPA
Sbjct: 95  GHKSDGETIEWLLQQAEPA 113


>ref|XP_004173314.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor TCP8-like,
           partial [Cucumis sativus]
          Length = 486

 Score =  125 bits (315), Expect = 3e-27
 Identities = 66/86 (76%), Positives = 71/86 (82%), Gaps = 2/86 (2%)
 Frame = -3

Query: 253 INASLAIATRSDSLT--DPSKKPSTQQTQIVAKRSTKDRHTKVDGRGRRIRMPATCAARV 80
           ++ASL IATRSD+    DPS + ST       KRSTKDRHTKV+GRGRRIRMPATCAAR 
Sbjct: 100 LDASLVIATRSDTTAAADPSPR-STSTANAANKRSTKDRHTKVEGRGRRIRMPATCAARX 158

Query: 79  FQLTRELGHKSDGETIEWLLQQAEPA 2
           FQLTRELGHKSDGETIEWLLQQAEPA
Sbjct: 159 FQLTRELGHKSDGETIEWLLQQAEPA 184


>emb|CAN64544.1| hypothetical protein VITISV_033383 [Vitis vinifera]
          Length = 550

 Score =  124 bits (312), Expect = 6e-27
 Identities = 70/106 (66%), Positives = 76/106 (71%), Gaps = 22/106 (20%)
 Frame = -3

Query: 253 INASLAIATRSDS--------LTDPSKKPSTQQ--------------TQIVAKRSTKDRH 140
           ++ASLAIATRS++        + D +KK   QQ              T   AKRSTKDRH
Sbjct: 124 VDASLAIATRSEADRSRSGGGVVDSTKKNQQQQQQQQQQQQQQLTIGTNPPAKRSTKDRH 183

Query: 139 TKVDGRGRRIRMPATCAARVFQLTRELGHKSDGETIEWLLQQAEPA 2
           TKVDGRGRRIRMPATCAARVFQLTRELGHKSDGETIEWLLQQAEPA
Sbjct: 184 TKVDGRGRRIRMPATCAARVFQLTRELGHKSDGETIEWLLQQAEPA 229


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