BLASTX nr result

ID: Panax21_contig00020827 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00020827
         (368 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002262954.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   164   9e-39
ref|XP_003556440.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   154   5e-36
ref|XP_002323817.1| predicted protein [Populus trichocarpa] gi|2...   154   9e-36
ref|XP_002305992.1| predicted protein [Populus trichocarpa] gi|2...   154   9e-36
ref|XP_003536158.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   153   1e-35

>ref|XP_002262954.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase isozyme L5 [Vitis
           vinifera] gi|147766506|emb|CAN60599.1| hypothetical
           protein VITISV_027729 [Vitis vinifera]
          Length = 334

 Score =  164 bits (414), Expect = 9e-39
 Identities = 83/98 (84%), Positives = 91/98 (92%), Gaps = 1/98 (1%)
 Frame = +2

Query: 2   RRRERLLKQLAALQSERL-DSSNIEALNKSLSEVNTGIENATEKILVEEEKFNKWRTENF 178
           +RRE +L QLAALQSER+ D+SNIEALNKSLSEVN GIE ATEKIL+EEEKF KWRTEN 
Sbjct: 237 KRREHILHQLAALQSERMVDNSNIEALNKSLSEVNAGIEGATEKILMEEEKFKKWRTENI 296

Query: 179 RRKHNYIPFLFNFLKILAEKKQLRPLIEKAKQKTSNTR 292
           RRKHNYIPFLFNFLKILAEKKQL+PLIEKAKQKT+N+R
Sbjct: 297 RRKHNYIPFLFNFLKILAEKKQLKPLIEKAKQKTNNSR 334


>ref|XP_003556440.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase isozyme L5-like
           [Glycine max]
          Length = 334

 Score =  154 bits (390), Expect = 5e-36
 Identities = 79/98 (80%), Positives = 89/98 (90%), Gaps = 1/98 (1%)
 Frame = +2

Query: 2   RRRERLLKQLAALQSERL-DSSNIEALNKSLSEVNTGIENATEKILVEEEKFNKWRTENF 178
           +RRER+L+QLAA +S+RL D+S+ EALN SLSEVN GIE ATEKIL+EEEKF KWRTEN 
Sbjct: 237 KRRERILQQLAASKSDRLVDNSSFEALNNSLSEVNAGIEAATEKILMEEEKFKKWRTENI 296

Query: 179 RRKHNYIPFLFNFLKILAEKKQLRPLIEKAKQKTSNTR 292
           RRKHNYIPFLFNFLKILAEKKQL+PLIEKAKQKTS+ R
Sbjct: 297 RRKHNYIPFLFNFLKILAEKKQLKPLIEKAKQKTSSPR 334


>ref|XP_002323817.1| predicted protein [Populus trichocarpa] gi|222866819|gb|EEF03950.1|
           predicted protein [Populus trichocarpa]
          Length = 334

 Score =  154 bits (388), Expect = 9e-36
 Identities = 77/98 (78%), Positives = 89/98 (90%), Gaps = 1/98 (1%)
 Frame = +2

Query: 2   RRRERLLKQLAALQSERL-DSSNIEALNKSLSEVNTGIENATEKILVEEEKFNKWRTENF 178
           ++RER+L+QLAA Q+ERL D+SN EALNKSLSEVN GIE+ATEKIL+EE+KF KWRTEN 
Sbjct: 237 KKRERILQQLAAFQAERLVDNSNFEALNKSLSEVNGGIESATEKILMEEDKFKKWRTENI 296

Query: 179 RRKHNYIPFLFNFLKILAEKKQLRPLIEKAKQKTSNTR 292
           RRKHNYIPFLFNFLKILAEKKQL+PLIEKAKQK   ++
Sbjct: 297 RRKHNYIPFLFNFLKILAEKKQLKPLIEKAKQKAGASK 334


>ref|XP_002305992.1| predicted protein [Populus trichocarpa] gi|222848956|gb|EEE86503.1|
           predicted protein [Populus trichocarpa]
          Length = 334

 Score =  154 bits (388), Expect = 9e-36
 Identities = 77/98 (78%), Positives = 89/98 (90%), Gaps = 1/98 (1%)
 Frame = +2

Query: 2   RRRERLLKQLAALQSERL-DSSNIEALNKSLSEVNTGIENATEKILVEEEKFNKWRTENF 178
           +RRER+++QLAA Q+ERL D+ N E+LNKSLSEVN  IE+ATEKIL+EEEKF KWRTEN 
Sbjct: 237 KRRERIVQQLAAFQAERLVDNGNYESLNKSLSEVNAAIESATEKILMEEEKFKKWRTENI 296

Query: 179 RRKHNYIPFLFNFLKILAEKKQLRPLIEKAKQKTSNTR 292
           RRKHNYIPFLFNFLKILAEKKQL+PLIEKAKQKTS ++
Sbjct: 297 RRKHNYIPFLFNFLKILAEKKQLKPLIEKAKQKTSASK 334


>ref|XP_003536158.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase isozyme L5-like
           [Glycine max]
          Length = 334

 Score =  153 bits (387), Expect = 1e-35
 Identities = 78/98 (79%), Positives = 89/98 (90%), Gaps = 1/98 (1%)
 Frame = +2

Query: 2   RRRERLLKQLAALQSERL-DSSNIEALNKSLSEVNTGIENATEKILVEEEKFNKWRTENF 178
           +RRER+L+QLAA +S+RL D+S+ EALN SLSEVN GIE ATEKIL+EEEKF KW+TEN 
Sbjct: 237 KRRERILQQLAASKSDRLVDNSSFEALNNSLSEVNAGIEAATEKILMEEEKFKKWKTENI 296

Query: 179 RRKHNYIPFLFNFLKILAEKKQLRPLIEKAKQKTSNTR 292
           RRKHNYIPFLFNFLKILAEKKQL+PLIEKAKQKTS+ R
Sbjct: 297 RRKHNYIPFLFNFLKILAEKKQLKPLIEKAKQKTSSPR 334


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