BLASTX nr result

ID: Panax21_contig00020818 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00020818
         (350 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002325793.1| predicted protein [Populus trichocarpa] gi|2...   108   6e-22
ref|XP_003631859.1| PREDICTED: translational activator GCN1 isof...   107   1e-21
ref|XP_002267871.2| PREDICTED: translational activator GCN1 isof...   107   1e-21
emb|CBI28651.3| unnamed protein product [Vitis vinifera]              107   1e-21
emb|CAN77483.1| hypothetical protein VITISV_040059 [Vitis vinifera]   107   1e-21

>ref|XP_002325793.1| predicted protein [Populus trichocarpa] gi|222862668|gb|EEF00175.1|
           predicted protein [Populus trichocarpa]
          Length = 865

 Score =  108 bits (269), Expect = 6e-22
 Identities = 56/65 (86%), Positives = 59/65 (90%)
 Frame = -2

Query: 349 GLAFSTLNKSVRMQSIDEIVPTLQHALENDQMSDTALDGLKQILSVRTTAVLPHILPKLV 170
           GLAFSTL KS  MQ+IDEIVPTL HALE+D+ SDTALDGLKQILSVRTTAVLPHILPKLV
Sbjct: 222 GLAFSTLYKSAGMQAIDEIVPTLLHALEDDETSDTALDGLKQILSVRTTAVLPHILPKLV 281

Query: 169 QLPLS 155
            LPLS
Sbjct: 282 HLPLS 286


>ref|XP_003631859.1| PREDICTED: translational activator GCN1 isoform 2 [Vitis vinifera]
          Length = 2461

 Score =  107 bits (266), Expect = 1e-21
 Identities = 55/65 (84%), Positives = 59/65 (90%)
 Frame = -2

Query: 349  GLAFSTLNKSVRMQSIDEIVPTLQHALENDQMSDTALDGLKQILSVRTTAVLPHILPKLV 170
            GLAFSTL KS  MQ+IDEIVPTL H+LE+DQ SDTALDGLKQILSVRTTAVLPHILPKLV
Sbjct: 1818 GLAFSTLYKSAGMQAIDEIVPTLLHSLEDDQTSDTALDGLKQILSVRTTAVLPHILPKLV 1877

Query: 169  QLPLS 155
             LPL+
Sbjct: 1878 HLPLT 1882


>ref|XP_002267871.2| PREDICTED: translational activator GCN1 isoform 1 [Vitis vinifera]
          Length = 2613

 Score =  107 bits (266), Expect = 1e-21
 Identities = 55/65 (84%), Positives = 59/65 (90%)
 Frame = -2

Query: 349  GLAFSTLNKSVRMQSIDEIVPTLQHALENDQMSDTALDGLKQILSVRTTAVLPHILPKLV 170
            GLAFSTL KS  MQ+IDEIVPTL H+LE+DQ SDTALDGLKQILSVRTTAVLPHILPKLV
Sbjct: 1970 GLAFSTLYKSAGMQAIDEIVPTLLHSLEDDQTSDTALDGLKQILSVRTTAVLPHILPKLV 2029

Query: 169  QLPLS 155
             LPL+
Sbjct: 2030 HLPLT 2034


>emb|CBI28651.3| unnamed protein product [Vitis vinifera]
          Length = 2636

 Score =  107 bits (266), Expect = 1e-21
 Identities = 55/65 (84%), Positives = 59/65 (90%)
 Frame = -2

Query: 349  GLAFSTLNKSVRMQSIDEIVPTLQHALENDQMSDTALDGLKQILSVRTTAVLPHILPKLV 170
            GLAFSTL KS  MQ+IDEIVPTL H+LE+DQ SDTALDGLKQILSVRTTAVLPHILPKLV
Sbjct: 1993 GLAFSTLYKSAGMQAIDEIVPTLLHSLEDDQTSDTALDGLKQILSVRTTAVLPHILPKLV 2052

Query: 169  QLPLS 155
             LPL+
Sbjct: 2053 HLPLT 2057


>emb|CAN77483.1| hypothetical protein VITISV_040059 [Vitis vinifera]
          Length = 720

 Score =  107 bits (266), Expect = 1e-21
 Identities = 55/65 (84%), Positives = 59/65 (90%)
 Frame = -2

Query: 349 GLAFSTLNKSVRMQSIDEIVPTLQHALENDQMSDTALDGLKQILSVRTTAVLPHILPKLV 170
           GLAFSTL KS  MQ+IDEIVPTL H+LE+DQ SDTALDGLKQILSVRTTAVLPHILPKLV
Sbjct: 77  GLAFSTLYKSAGMQAIDEIVPTLLHSLEDDQTSDTALDGLKQILSVRTTAVLPHILPKLV 136

Query: 169 QLPLS 155
            LPL+
Sbjct: 137 HLPLT 141


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