BLASTX nr result
ID: Panax21_contig00020802
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00020802 (620 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002278785.1| PREDICTED: DNA helicase INO80-like [Vitis vi... 100 7e-30 emb|CBI29799.3| unnamed protein product [Vitis vinifera] 99 2e-29 ref|XP_002308925.1| chromatin remodeling complex subunit [Populu... 98 1e-25 ref|XP_004142662.1| PREDICTED: DNA helicase INO80-like [Cucumis ... 95 4e-25 ref|XP_004161718.1| PREDICTED: LOW QUALITY PROTEIN: DNA helicase... 95 4e-25 >ref|XP_002278785.1| PREDICTED: DNA helicase INO80-like [Vitis vinifera] Length = 1563 Score = 100 bits (248), Expect(2) = 7e-30 Identities = 55/91 (60%), Positives = 66/91 (72%), Gaps = 5/91 (5%) Frame = -2 Query: 619 LDQKLKEIPLQAR----DRQKKKGGTKGIRIDAEGDAYLEDLTNPDSQVNGSQPSPDPEK 452 L+QKL+++PLQ R D+QKKK GTKGI +DAEGDA LED N SQ NG +PSPD E+ Sbjct: 1386 LEQKLRDLPLQVRFKSKDKQKKKRGTKGILLDAEGDATLEDFPN-ISQGNGQEPSPDAER 1444 Query: 451 VKSNNKKRKATTDNQ-PPKPRPQNGGLKNND 362 KS++KKRKA TD Q PPKPR +KN D Sbjct: 1445 PKSSSKKRKAATDKQTPPKPRNSQKAMKNVD 1475 Score = 56.2 bits (134), Expect(2) = 7e-30 Identities = 28/38 (73%), Positives = 29/38 (76%) Frame = -3 Query: 348 MWSDYEGNDPLQNSDSQLHKPKRPKRPTKSVNENLESA 235 M DYE +D LQN D QL K KRPKRPTKSVNENLE A Sbjct: 1486 MAMDYELDDSLQNDDMQLQKHKRPKRPTKSVNENLEPA 1523 >emb|CBI29799.3| unnamed protein product [Vitis vinifera] Length = 1557 Score = 99.0 bits (245), Expect(2) = 2e-29 Identities = 54/87 (62%), Positives = 65/87 (74%), Gaps = 1/87 (1%) Frame = -2 Query: 619 LDQKLKEIPLQARDRQKKKGGTKGIRIDAEGDAYLEDLTNPDSQVNGSQPSPDPEKVKSN 440 L+QKL+++PLQ D+QKKK GTKGI +DAEGDA LED N SQ NG +PSPD E+ KS+ Sbjct: 1386 LEQKLRDLPLQ--DKQKKKRGTKGILLDAEGDATLEDFPNI-SQGNGQEPSPDAERPKSS 1442 Query: 439 NKKRKATTDNQ-PPKPRPQNGGLKNND 362 +KKRKA TD Q PPKPR +KN D Sbjct: 1443 SKKRKAATDKQTPPKPRNSQKAMKNVD 1469 Score = 56.2 bits (134), Expect(2) = 2e-29 Identities = 28/38 (73%), Positives = 29/38 (76%) Frame = -3 Query: 348 MWSDYEGNDPLQNSDSQLHKPKRPKRPTKSVNENLESA 235 M DYE +D LQN D QL K KRPKRPTKSVNENLE A Sbjct: 1480 MAMDYELDDSLQNDDMQLQKHKRPKRPTKSVNENLEPA 1517 >ref|XP_002308925.1| chromatin remodeling complex subunit [Populus trichocarpa] gi|222854901|gb|EEE92448.1| chromatin remodeling complex subunit [Populus trichocarpa] Length = 1483 Score = 97.8 bits (242), Expect(2) = 1e-25 Identities = 52/77 (67%), Positives = 61/77 (79%), Gaps = 1/77 (1%) Frame = -2 Query: 619 LDQKLKEIPLQARDRQKKKGGTKGIRIDAEGDAYLEDLTNPDSQVNGSQPSPDPEKVKSN 440 L+QKL+EIPLQA+DRQKKK TK IR+DAEGDA LEDLT +Q G++PS D EK+K N Sbjct: 1334 LEQKLREIPLQAKDRQKKKP-TKAIRVDAEGDATLEDLTETVTQGTGNEPSEDTEKLKPN 1392 Query: 439 NKKRKATTDNQ-PPKPR 392 NKKRKA +D Q PKPR Sbjct: 1393 NKKRKAASDKQITPKPR 1409 Score = 44.7 bits (104), Expect(2) = 1e-25 Identities = 21/35 (60%), Positives = 24/35 (68%) Frame = -3 Query: 339 DYEGNDPLQNSDSQLHKPKRPKRPTKSVNENLESA 235 DYE +DP N + Q +PKR KRP KSVNE LE A Sbjct: 1422 DYELDDPFLNDEPQSQRPKRLKRPKKSVNEKLEPA 1456 >ref|XP_004142662.1| PREDICTED: DNA helicase INO80-like [Cucumis sativus] Length = 1501 Score = 95.1 bits (235), Expect(2) = 4e-25 Identities = 47/71 (66%), Positives = 57/71 (80%) Frame = -2 Query: 619 LDQKLKEIPLQARDRQKKKGGTKGIRIDAEGDAYLEDLTNPDSQVNGSQPSPDPEKVKSN 440 L+QKL+EIP+ A+DRQKKK KGIR+DAEGDA LEDLTNP+S+V PSPDPEK K+N Sbjct: 1369 LEQKLREIPIVAKDRQKKKQA-KGIRVDAEGDASLEDLTNPESRVTEYDPSPDPEKTKAN 1427 Query: 439 NKKRKATTDNQ 407 +KKRK + Q Sbjct: 1428 SKKRKGGPEKQ 1438 Score = 45.4 bits (106), Expect(2) = 4e-25 Identities = 20/32 (62%), Positives = 25/32 (78%) Frame = -3 Query: 339 DYEGNDPLQNSDSQLHKPKRPKRPTKSVNENL 244 D++ ++ QN + Q KPKRPKRPTKSVNENL Sbjct: 1457 DFDLDESRQNLEPQTQKPKRPKRPTKSVNENL 1488 >ref|XP_004161718.1| PREDICTED: LOW QUALITY PROTEIN: DNA helicase INO80-like [Cucumis sativus] Length = 711 Score = 95.1 bits (235), Expect(2) = 4e-25 Identities = 47/71 (66%), Positives = 57/71 (80%) Frame = -2 Query: 619 LDQKLKEIPLQARDRQKKKGGTKGIRIDAEGDAYLEDLTNPDSQVNGSQPSPDPEKVKSN 440 L+QKL+EIP+ A+DRQKKK KGIR+DAEGDA LEDLTNP+S+V PSPDPEK K+N Sbjct: 579 LEQKLREIPIVAKDRQKKKQA-KGIRVDAEGDASLEDLTNPESRVTEYDPSPDPEKTKAN 637 Query: 439 NKKRKATTDNQ 407 +KKRK + Q Sbjct: 638 SKKRKGGPEKQ 648 Score = 45.4 bits (106), Expect(2) = 4e-25 Identities = 20/32 (62%), Positives = 25/32 (78%) Frame = -3 Query: 339 DYEGNDPLQNSDSQLHKPKRPKRPTKSVNENL 244 D++ ++ QN + Q KPKRPKRPTKSVNENL Sbjct: 667 DFDLDESRQNLEPQTQKPKRPKRPTKSVNENL 698