BLASTX nr result

ID: Panax21_contig00020785 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00020785
         (961 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265872.2| PREDICTED: conserved oligomeric Golgi comple...   232   9e-59
ref|XP_002311274.1| predicted protein [Populus trichocarpa] gi|2...   229   6e-58
gb|ADI48326.1| putative low density lipoprotein B-like protein [...   222   1e-55
ref|XP_002514767.1| conserved hypothetical protein [Ricinus comm...   219   8e-55
ref|XP_004163062.1| PREDICTED: conserved oligomeric Golgi comple...   213   4e-53

>ref|XP_002265872.2| PREDICTED: conserved oligomeric Golgi complex subunit 1-like [Vitis
            vinifera]
          Length = 1067

 Score =  232 bits (592), Expect = 9e-59
 Identities = 120/163 (73%), Positives = 133/163 (81%), Gaps = 11/163 (6%)
 Frame = +3

Query: 3    GFFVQLNRMYTNTMQKLPTNSESNIMRCSTVPRFKYLPISAPALSAKGTTKTSISTSMDD 182
            GFFVQLNRMYT+T+QK+PTNSESNIMRCSTVPRFKYLPISAPALS++GTTKTSI TS DD
Sbjct: 905  GFFVQLNRMYTDTVQKVPTNSESNIMRCSTVPRFKYLPISAPALSSRGTTKTSIPTSSDD 964

Query: 183  VSSRNSWKGYMHDDLSRKIDMDEDSGFGMATPFLKSFMQVGSRFGESTLKFGSMLTDGQV 362
             SSR+ WK Y + +LS+KID D+ S FG+ATP LKSFMQVGSRFGESTLK GS+ TDGQV
Sbjct: 965  ASSRSPWKAYANGELSQKIDFDDTSSFGVATPLLKSFMQVGSRFGESTLKLGSIWTDGQV 1024

Query: 363  GR-----------FGDILPVQAAGLLSSFTAARSDS*LPMTPF 458
            G+           FGDILPVQAAGLLSS TA RSDS LP   F
Sbjct: 1025 GKFKDKSAAAMSTFGDILPVQAAGLLSSLTATRSDSRLPTERF 1067


>ref|XP_002311274.1| predicted protein [Populus trichocarpa] gi|222851094|gb|EEE88641.1|
            predicted protein [Populus trichocarpa]
          Length = 1071

 Score =  229 bits (585), Expect = 6e-58
 Identities = 116/156 (74%), Positives = 129/156 (82%), Gaps = 11/156 (7%)
 Frame = +3

Query: 3    GFFVQLNRMYTNTMQKLPTNSESNIMRCSTVPRFKYLPISAPALSAKGTTKTSISTSMDD 182
            GFFVQLNRMY +TMQKLP+N ESNIMRC TVPRFKYLPIS PALS++GTTKTS   + DD
Sbjct: 916  GFFVQLNRMYIDTMQKLPSNPESNIMRCCTVPRFKYLPISTPALSSRGTTKTSFQATSDD 975

Query: 183  VSSRNSWKGYMHDDLSRKIDMDEDSGFGMATPFLKSFMQVGSRFGESTLKFGSMLTDGQV 362
            +SSR+SWK Y +++LSR ID+DE+S FG+ATP LKSFMQVGSRFGESTLK GSMLTDGQV
Sbjct: 976  ISSRSSWKAYTNEELSRNIDLDENSSFGVATPILKSFMQVGSRFGESTLKLGSMLTDGQV 1035

Query: 363  G-----------RFGDILPVQAAGLLSSFTAARSDS 437
            G            FGDILPVQAAGLLSSFTA RSDS
Sbjct: 1036 GIFKDRSAAAMSTFGDILPVQAAGLLSSFTATRSDS 1071


>gb|ADI48326.1| putative low density lipoprotein B-like protein [Corchorus olitorius]
          Length = 1070

 Score =  222 bits (565), Expect = 1e-55
 Identities = 110/156 (70%), Positives = 127/156 (81%), Gaps = 11/156 (7%)
 Frame = +3

Query: 3    GFFVQLNRMYTNTMQKLPTNSESNIMRCSTVPRFKYLPISAPALSAKGTTKTSISTSMDD 182
            GFFVQLNRMYT+TMQKLPTNSESNIMRCS VPRFKYLPISAPALS++GTT  SI+ + +D
Sbjct: 915  GFFVQLNRMYTDTMQKLPTNSESNIMRCSVVPRFKYLPISAPALSSRGTTGASITAASND 974

Query: 183  VSSRNSWKGYMHDDLSRKIDMDEDSGFGMATPFLKSFMQVGSRFGESTLKFGSMLTDGQV 362
            ++SR+SW+ Y   ++SRK+DMD+   FG+ATPFLKSFMQVGS+FGESTLK GS+LTDGQV
Sbjct: 975  IASRSSWRAYTDGEISRKVDMDDQQSFGVATPFLKSFMQVGSKFGESTLKLGSILTDGQV 1034

Query: 363  G-----------RFGDILPVQAAGLLSSFTAARSDS 437
            G            FGDILPVQA G LSSFT  RSDS
Sbjct: 1035 GIFKDRSAAAMSTFGDILPVQAGGFLSSFTTTRSDS 1070


>ref|XP_002514767.1| conserved hypothetical protein [Ricinus communis]
            gi|223545818|gb|EEF47321.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1065

 Score =  219 bits (558), Expect = 8e-55
 Identities = 110/156 (70%), Positives = 127/156 (81%), Gaps = 11/156 (7%)
 Frame = +3

Query: 3    GFFVQLNRMYTNTMQKLPTNSESNIMRCSTVPRFKYLPISAPALSAKGTTKTSISTSMDD 182
            GFF+QLNRMYT+T+QKLP N ESNIMRCSTVPRFKYLPISAPALS++GTTK SI  + DD
Sbjct: 910  GFFMQLNRMYTDTVQKLPCNPESNIMRCSTVPRFKYLPISAPALSSRGTTKPSIPAASDD 969

Query: 183  VSSRNSWKGYMHDDLSRKIDMDEDSGFGMATPFLKSFMQVGSRFGESTLKFGSMLTDGQV 362
            ++SRN+WK Y   +LS+K+D+D++S FG+A P LKSFMQVGSRFGESTLK GS+LTDGQV
Sbjct: 970  ITSRNTWKAYSSGELSQKMDLDDNSSFGVAAPILKSFMQVGSRFGESTLKLGSILTDGQV 1029

Query: 363  G-----------RFGDILPVQAAGLLSSFTAARSDS 437
            G            FGDILP QAAGLLSSFTA R DS
Sbjct: 1030 GIFKDRSAAAMSTFGDILPAQAAGLLSSFTATRLDS 1065


>ref|XP_004163062.1| PREDICTED: conserved oligomeric Golgi complex subunit 1-like [Cucumis
            sativus]
          Length = 1057

 Score =  213 bits (543), Expect = 4e-53
 Identities = 107/156 (68%), Positives = 125/156 (80%), Gaps = 11/156 (7%)
 Frame = +3

Query: 3    GFFVQLNRMYTNTMQKLPTNSESNIMRCSTVPRFKYLPISAPALSAKGTTKTSISTSMDD 182
            GFFVQLNRMYT+T+QKLP+NSESNIMRC TVPRFKYLPISAP LS+KG  K ++ T  DD
Sbjct: 902  GFFVQLNRMYTDTVQKLPSNSESNIMRCLTVPRFKYLPISAPVLSSKGGMKATVPTPSDD 961

Query: 183  VSSRNSWKGYMHDDLSRKIDMDEDSGFGMATPFLKSFMQVGSRFGESTLKFGSMLTDGQV 362
            +SSRNSWK + + +L +K+D++++S FG+A P  KSFMQVGSRFGESTLK GSMLTD QV
Sbjct: 962  ISSRNSWKAFTNGELPQKMDLNDNSSFGVAAPLFKSFMQVGSRFGESTLKLGSMLTDSQV 1021

Query: 363  G-----------RFGDILPVQAAGLLSSFTAARSDS 437
            G            FGDILP QAAGLLSSFTA+RSDS
Sbjct: 1022 GIFKDRSAAAMSTFGDILPAQAAGLLSSFTASRSDS 1057


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