BLASTX nr result
ID: Panax21_contig00020781
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00020781 (781 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containi... 322 4e-86 ref|XP_002320827.1| predicted protein [Populus trichocarpa] gi|2... 288 7e-76 ref|XP_004139715.1| PREDICTED: pentatricopeptide repeat-containi... 288 1e-75 ref|XP_003548443.1| PREDICTED: pentatricopeptide repeat-containi... 242 6e-62 ref|XP_002878387.1| pentatricopeptide repeat-containing protein ... 239 6e-61 >ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520, mitochondrial [Vitis vinifera] gi|297745328|emb|CBI40408.3| unnamed protein product [Vitis vinifera] Length = 765 Score = 322 bits (826), Expect = 4e-86 Identities = 161/266 (60%), Positives = 199/266 (74%), Gaps = 6/266 (2%) Frame = +1 Query: 1 RARMVEEALLAYNYLDPELRNTNVLNVVIDVLLKSGRVDDALKLLDEMLEPSTNVPPNEN 180 RA+MV+E+ L YN L P R T++ N++IDVL + GRVDDAL LLDEML+P PPN N Sbjct: 171 RAQMVDESFLVYNELCPSRRLTHIRNILIDVLFRKGRVDDALHLLDEMLQPKAEFPPNSN 230 Query: 181 TSDTVFGELSRGN-----VSEKEIVELVSKFGKHGVFPSEMWLSQLIMKFCRKGNTNSAW 345 T VF LS+ + V E+EIV LVSKF +H VFP+ +WL+QLI + CR G T+ AW Sbjct: 231 TGHIVFSALSKRDKVGRAVDEEEIVGLVSKFAEHEVFPNSIWLTQLISRLCRSGRTDRAW 290 Query: 346 EILHEAMKLGGIANVGSCNALLKGLHIKGDFKRMNMLLQDMKDNNIHPNVVTFGILIYHL 525 ++LH MKLGG+ SCNALL L +FKRMN LL +MK+ +I PNVVTFGILI HL Sbjct: 291 DVLHGLMKLGGVMEAASCNALLTALGRAREFKRMNTLLAEMKEMDIQPNVVTFGILINHL 350 Query: 526 CKFRRIDVALDVFKKMSEG-SEGILVKPDVILYNTLIDGLCKVGRQEEGLDLMEQMRLQH 702 CKFRR+D AL+VF+KM+ G S G LV+PDVI YNTLIDGLCKVGRQEEGL L+E+MR Q Sbjct: 351 CKFRRVDEALEVFEKMNGGESNGFLVEPDVITYNTLIDGLCKVGRQEEGLGLVERMRSQP 410 Query: 703 ECVPNTVTFNCLIDGFCKSGEIERSQ 780 C+PNTVT+NCLIDG+CK+ IE ++ Sbjct: 411 RCMPNTVTYNCLIDGYCKASMIEAAR 436 Score = 103 bits (257), Expect = 4e-20 Identities = 70/240 (29%), Positives = 116/240 (48%), Gaps = 1/240 (0%) Frame = +1 Query: 61 NTNVLNVVIDVLLKSGRVDDALKLLDEMLEPSTNVPPNENTSDT-VFGELSRGNVSEKEI 237 NT N +ID K+ ++ A +L D+M + VPPN T +T V G G ++ Sbjct: 415 NTVTYNCLIDGYCKASMIEAARELFDQMNKDG--VPPNVVTLNTLVDGMCKHGRINGA-- 470 Query: 238 VELVSKFGKHGVFPSEMWLSQLIMKFCRKGNTNSAWEILHEAMKLGGIANVGSCNALLKG 417 VE ++ G+ + + + LI FC N A E+ E ++ G + L+ G Sbjct: 471 VEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISG 530 Query: 418 LHIKGDFKRMNMLLQDMKDNNIHPNVVTFGILIYHLCKFRRIDVALDVFKKMSEGSEGIL 597 L G R + +L MK+ P++V+F +LI C+ ++D A ++ K+M Sbjct: 531 LSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAG---- 586 Query: 598 VKPDVILYNTLIDGLCKVGRQEEGLDLMEQMRLQHECVPNTVTFNCLIDGFCKSGEIERS 777 +KPD + YNTLI K G LM++M ++ VP VT+ LI +C +G ++ + Sbjct: 587 IKPDGVTYNTLISHFSKTGDFSTAHRLMKKM-VKEGLVPTVVTYGALIHAYCLNGNLDEA 645 Score = 101 bits (251), Expect = 2e-19 Identities = 69/229 (30%), Positives = 112/229 (48%) Frame = +1 Query: 61 NTNVLNVVIDVLLKSGRVDDALKLLDEMLEPSTNVPPNENTSDTVFGELSRGNVSEKEIV 240 N +I ++ A++L DEMLE + P+ T+ LS+ ++ Sbjct: 485 NAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCS--PDAIVYYTLISGLSQAGKLDRASF 542 Query: 241 ELVSKFGKHGVFPSEMWLSQLIMKFCRKGNTNSAWEILHEAMKLGGIANVGSCNALLKGL 420 L SK + G P + + LI FCRK + A+E+L E G + + N L+ Sbjct: 543 VL-SKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHF 601 Query: 421 HIKGDFKRMNMLLQDMKDNNIHPNVVTFGILIYHLCKFRRIDVALDVFKKMSEGSEGILV 600 GDF + L++ M + P VVT+G LI+ C +D A+ +F+ MS S+ V Sbjct: 602 SKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSK---V 658 Query: 601 KPDVILYNTLIDGLCKVGRQEEGLDLMEQMRLQHECVPNTVTFNCLIDG 747 P+ ++YN LI+ LC+ + + L LM+ M+++ PNT TFN + G Sbjct: 659 PPNTVIYNILINSLCRKNQVDLALSLMDDMKVK-GVKPNTNTFNAMFKG 706 Score = 89.4 bits (220), Expect = 8e-16 Identities = 63/242 (26%), Positives = 117/242 (48%), Gaps = 3/242 (1%) Frame = +1 Query: 61 NTNVLNVVIDVLLKSGRVDDALKLLDEMLEPSTN---VPPNENTSDTVFGELSRGNVSEK 231 N ++I+ L K RVD+AL++ ++M +N V P+ T +T+ L + E+ Sbjct: 339 NVVTFGILINHLCKFRRVDEALEVFEKMNGGESNGFLVEPDVITYNTLIDGLCKVGRQEE 398 Query: 232 EIVELVSKFGKHGVFPSEMWLSQLIMKFCRKGNTNSAWEILHEAMKLGGIANVGSCNALL 411 + + + P+ + + LI +C+ +A E+ + K G NV + N L+ Sbjct: 399 GLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQMNKDGVPPNVVTLNTLV 458 Query: 412 KGLHIKGDFKRMNMLLQDMKDNNIHPNVVTFGILIYHLCKFRRIDVALDVFKKMSEGSEG 591 G+ G +M+ + N VT+ LI C I+ A+++F +M E Sbjct: 459 DGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEAG-- 516 Query: 592 ILVKPDVILYNTLIDGLCKVGRQEEGLDLMEQMRLQHECVPNTVTFNCLIDGFCKSGEIE 771 PD I+Y TLI GL + G+ + ++ +M+ + P+ V+FN LI+GFC+ +++ Sbjct: 517 --CSPDAIVYYTLISGLSQAGKLDRASFVLSKMK-EAGFSPDIVSFNVLINGFCRKNKLD 573 Query: 772 RS 777 + Sbjct: 574 EA 575 Score = 61.2 bits (147), Expect = 2e-07 Identities = 50/195 (25%), Positives = 86/195 (44%), Gaps = 2/195 (1%) Frame = +1 Query: 76 NVVIDVLLKSGRVDDALKLLDEMLEPSTNVPPNENTSDTVFGELSR-GNVSEKEIVELVS 252 NV+I+ + ++D+A ++L EM + + P+ T +T+ S+ G+ S L+ Sbjct: 560 NVLINGFCRKNKLDEAYEMLKEM--ENAGIKPDGVTYNTLISHFSKTGDFSTAH--RLMK 615 Query: 253 KFGKHGVFPSEMWLSQLIMKFCRKGNTNSAWEILHEAMKLGGIA-NVGSCNALLKGLHIK 429 K K G+ P+ + LI +C GN + A +I + + N N L+ L K Sbjct: 616 KMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRK 675 Query: 430 GDFKRMNMLLQDMKDNNIHPNVVTFGILIYHLCKFRRIDVALDVFKKMSEGSEGILVKPD 609 L+ DMK + PN TF + L + + A ++ +M+E + PD Sbjct: 676 NQVDLALSLMDDMKVKGVKPNTNTFNAMFKGLQEKNWLSKAFELMDRMTEHA----CNPD 731 Query: 610 VILYNTLIDGLCKVG 654 I L + L VG Sbjct: 732 YITMEILTEWLSAVG 746 >ref|XP_002320827.1| predicted protein [Populus trichocarpa] gi|222861600|gb|EEE99142.1| predicted protein [Populus trichocarpa] Length = 775 Score = 288 bits (738), Expect = 7e-76 Identities = 143/271 (52%), Positives = 194/271 (71%), Gaps = 11/271 (4%) Frame = +1 Query: 1 RARMVEEALLAYNYLDPELRNTNVLNVVIDVLLKSGRVDDALKLLDEMLEPS--TNVPPN 174 R+ +VEE+L+ +N LDP ++NT + NV + +LL+SGRV DALK++DEM E + +N PN Sbjct: 169 RSELVEESLILFNDLDPSVKNTYLRNVWLSILLRSGRVKDALKVIDEMFESNDDSNCRPN 228 Query: 175 ENTSDTVFGELSRGN-----VSEKEIVELVSKFGKHGVFPSEMWLSQLIMKFCRKGNTNS 339 + T D +F L + +SE EIV LV KFG+HGV S W+ +LI + CR TN Sbjct: 229 DATGDILFSFLLKRERNEELLSEDEIVNLVLKFGEHGVLISSFWMGRLITRLCRNRKTNR 288 Query: 340 AWEILHEAMKLGGIANVGSCNALLKGLHIKGDFKRMNMLLQDMKDNNIHPNVVTFGILIY 519 W++ E +KLG + +CN+LL GL +G+F RMN L++ M + +I PNVVTFGILI Sbjct: 289 GWDLFTEMIKLGAVLESAACNSLLTGLAREGNFNRMNELMEKMVEMDIQPNVVTFGILIN 348 Query: 520 HLCKFRRIDVALDVFKKMSEGSE----GILVKPDVILYNTLIDGLCKVGRQEEGLDLMEQ 687 H+CKFRR+D AL+V +KMS G E + V+PDV++YNTLIDGLCKVGRQ+EGL LME+ Sbjct: 349 HMCKFRRVDDALEVLEKMSGGKESGGISVSVEPDVVIYNTLIDGLCKVGRQQEGLGLMER 408 Query: 688 MRLQHECVPNTVTFNCLIDGFCKSGEIERSQ 780 MR Q C P+T+T+NCLIDGFCK+GEIE+ + Sbjct: 409 MRSQKGCAPDTITYNCLIDGFCKAGEIEKGK 439 Score = 86.7 bits (213), Expect = 5e-15 Identities = 68/273 (24%), Positives = 112/273 (41%), Gaps = 36/273 (13%) Frame = +1 Query: 61 NTNVLNVVIDVLLKSGRVDDALKLLDEMLEPSTNVPPNENTSDTVFGELSR-GNVSEKEI 237 +T N +ID K+G ++ +L DEM V PN T +T+ G + R G VS Sbjct: 418 DTITYNCLIDGFCKAGEIEKGKELFDEM--NKEGVAPNVVTVNTLVGGMCRTGRVS--SA 473 Query: 238 VELVSKFGKHGVFPSEMWLSQLIMKFCRKGNTNSAWEILHEAMKLGGIANVGSCNALLKG 417 V + + G+ + + LI FC N A E+ +E +K G + L+ G Sbjct: 474 VNFFVEAQRRGMKGDAVTYTALINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISG 533 Query: 418 LHIKGDFKRMNMLLQDMKDNNIHPNVVTFGILIYHLCKFRRIDVALDVFKKMSEGSEGIL 597 G + +L ++K I P+ V + LI C+ + ++ K+M E Sbjct: 534 FSQAGRMADASFVLAELKKLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAG---- 589 Query: 598 VKPDVILYNTL-----------------------------------IDGLCKVGRQEEGL 672 +KPD I YNTL I+ C G E + Sbjct: 590 LKPDTITYNTLIAYASKNGDLKFAQKVMRKMIKAGVVPTVATYGAVINAYCLNGNGNEAM 649 Query: 673 DLMEQMRLQHECVPNTVTFNCLIDGFCKSGEIE 771 ++ + M+ + PNTV +N LI+ CK+ +++ Sbjct: 650 EIFKDMKAASKVPPNTVIYNILINSLCKNNKVK 682 Score = 85.9 bits (211), Expect = 9e-15 Identities = 58/237 (24%), Positives = 112/237 (47%) Frame = +1 Query: 70 VLNVVIDVLLKSGRVDDALKLLDEMLEPSTNVPPNENTSDTVFGELSRGNVSEKEIVELV 249 + N +ID L K GR + L L++ M P + + G G + + + EL Sbjct: 385 IYNTLIDGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFCKAGEIEKGK--ELF 442 Query: 250 SKFGKHGVFPSEMWLSQLIMKFCRKGNTNSAWEILHEAMKLGGIANVGSCNALLKGLHIK 429 + K GV P+ + ++ L+ CR G +SA EA + G + + AL+ Sbjct: 443 DEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALINAFCNV 502 Query: 430 GDFKRMNMLLQDMKDNNIHPNVVTFGILIYHLCKFRRIDVALDVFKKMSEGSEGILVKPD 609 +F++ L +M + P+ + + LI + R+ A V ++ + + ++PD Sbjct: 503 NNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAELKK----LGIRPD 558 Query: 610 VILYNTLIDGLCKVGRQEEGLDLMEQMRLQHECVPNTVTFNCLIDGFCKSGEIERSQ 780 + YNTLI G C+ + +++++M + P+T+T+N LI K+G+++ +Q Sbjct: 559 TVCYNTLIGGFCRTNKFHRVFEMLKEME-EAGLKPDTITYNTLIAYASKNGDLKFAQ 614 Score = 85.1 bits (209), Expect = 2e-14 Identities = 60/232 (25%), Positives = 112/232 (48%), Gaps = 1/232 (0%) Frame = +1 Query: 82 VIDVLLKSGRVDDALKLLDEMLEPSTNVPPNENTSDTVFGELSR-GNVSEKEIVELVSKF 258 +I+ + A++L +EML+ + P+ T+ S+ G +++ V +++ Sbjct: 495 LINAFCNVNNFEKAMELFNEMLKSGCS--PDAIVYYTLISGFSQAGRMADASFV--LAEL 550 Query: 259 GKHGVFPSEMWLSQLIMKFCRKGNTNSAWEILHEAMKLGGIANVGSCNALLKGLHIKGDF 438 K G+ P + + LI FCR + +E+L E + G + + N L+ GD Sbjct: 551 KKLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASKNGDL 610 Query: 439 KRMNMLLQDMKDNNIHPNVVTFGILIYHLCKFRRIDVALDVFKKMSEGSEGILVKPDVIL 618 K +++ M + P V T+G +I C + A+++FK M S+ V P+ ++ Sbjct: 611 KFAQKVMRKMIKAGVVPTVATYGAVINAYCLNGNGNEAMEIFKDMKAASK---VPPNTVI 667 Query: 619 YNTLIDGLCKVGRQEEGLDLMEQMRLQHECVPNTVTFNCLIDGFCKSGEIER 774 YN LI+ LCK + + + LME M++ PNT T+N + G ++E+ Sbjct: 668 YNILINSLCKNNKVKSAVSLMEDMKI-WGVTPNTTTYNAIFKGLRDEKDLEK 718 Score = 79.0 bits (193), Expect = 1e-12 Identities = 58/236 (24%), Positives = 112/236 (47%), Gaps = 1/236 (0%) Frame = +1 Query: 70 VLNVVIDVLLKSGRVDDALKLLDEMLEPSTNVPPNENTSDTVFGELSRGNVSEKEIVELV 249 V +I ++GR+ DA +L E+ + + P+ +T+ G R N + + E++ Sbjct: 526 VYYTLISGFSQAGRMADASFVLAELKK--LGIRPDTVCYNTLIGGFCRTNKFHR-VFEML 582 Query: 250 SKFGKHGVFPSEMWLSQLIMKFCRKGNTNSAWEILHEAMKLGGIANVGSCNALLKGLHIK 429 + + G+ P + + LI + G+ A +++ + +K G + V + A++ + Sbjct: 583 KEMEEAGLKPDTITYNTLIAYASKNGDLKFAQKVMRKMIKAGVVPTVATYGAVINAYCLN 642 Query: 430 GDFKRMNMLLQDMKD-NNIHPNVVTFGILIYHLCKFRRIDVALDVFKKMSEGSEGILVKP 606 G+ + +DMK + + PN V + ILI LCK ++ A+ + + M V P Sbjct: 643 GNGNEAMEIFKDMKAASKVPPNTVIYNILINSLCKNNKVKSAVSLMEDMKIWG----VTP 698 Query: 607 DVILYNTLIDGLCKVGRQEEGLDLMEQMRLQHECVPNTVTFNCLIDGFCKSGEIER 774 + YN + GL E+ + M++M ++H C P+ +T L + GEIER Sbjct: 699 NTTTYNAIFKGLRDEKDLEKVFEFMDRM-IEHACNPDYITMEILTEWLSAVGEIER 753 Score = 71.6 bits (174), Expect = 2e-10 Identities = 56/237 (23%), Positives = 99/237 (41%), Gaps = 1/237 (0%) Frame = +1 Query: 61 NTNVLNVVIDVLLKSGRVDDALKLLDEMLEPSTNVPPNENTSDTVFGELSRGNVSEKEIV 240 N ++I+ + K RVDDAL++L++M G G +S Sbjct: 339 NVVTFGILINHMCKFRRVDDALEVLEKMS-----------------GGKESGGISVS--- 378 Query: 241 ELVSKFGKHGVFPSEMWLSQLIMKFCRKGNTNSAWEILHEAMKLGGIA-NVGSCNALLKG 417 V P + + LI C+ G ++ G A + + N L+ G Sbjct: 379 ----------VEPDVVIYNTLIDGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDG 428 Query: 418 LHIKGDFKRMNMLLQDMKDNNIHPNVVTFGILIYHLCKFRRIDVALDVFKKMSEGSEGIL 597 G+ ++ L +M + PNVVT L+ +C+ R+ A++ F + Sbjct: 429 FCKAGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRG---- 484 Query: 598 VKPDVILYNTLIDGLCKVGRQEEGLDLMEQMRLQHECVPNTVTFNCLIDGFCKSGEI 768 +K D + Y LI+ C V E+ ++L +M L+ C P+ + + LI GF ++G + Sbjct: 485 MKGDAVTYTALINAFCNVNNFEKAMELFNEM-LKSGCSPDAIVYYTLISGFSQAGRM 540 >ref|XP_004139715.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520, mitochondrial-like [Cucumis sativus] gi|449475521|ref|XP_004154479.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520, mitochondrial-like [Cucumis sativus] Length = 660 Score = 288 bits (736), Expect = 1e-75 Identities = 150/264 (56%), Positives = 184/264 (69%), Gaps = 7/264 (2%) Frame = +1 Query: 1 RARMVEEALLAYNYLDPELRNTNVLNVVIDVLLKSGRVDDALKLLDEMLEPSTNVPPNEN 180 R MV+EAL A++ LD +NTNV N +I++LLKSGRVD+A+ +LDEML P + PN+ Sbjct: 18 RIGMVDEALAAFSTLDSHAKNTNVRNEIINLLLKSGRVDNAMNVLDEMLLPESEFRPNDK 77 Query: 181 TSDTVFGELSR-----GNVSEKEIVELVSKFGKHGVFPSEMWLSQLIMKFCRKGNTNSAW 345 T+ VF L + G V E EI LVSKFGKH +FP + L+QLI K CR GNTN AW Sbjct: 78 TAGIVFNNLLKIDGLEGRVKEDEIAGLVSKFGKHNIFPDTIALTQLISKLCRSGNTNLAW 137 Query: 346 EILHEAMKLGGIANVGSCNALLKGLHIKGDFKRMNMLLQDMKDNNIHPNVVTFGILIYHL 525 IL M L G+ + CNALL GL +F +MN+L++ MKD NI P V+TFGILI HL Sbjct: 138 NILDNLMMLNGLKDAAPCNALLTGLGKAREFGKMNLLMRKMKDMNIQPTVITFGILINHL 197 Query: 526 CKFRRIDVALDVFKKMSEGSE--GILVKPDVILYNTLIDGLCKVGRQEEGLDLMEQMRLQ 699 CKFRRID AL+VF+KM E + V PD I+YNTLIDGLCKVGRQEE L LM +MR Sbjct: 198 CKFRRIDDALEVFEKMKGEKEETKVFVAPDTIMYNTLIDGLCKVGRQEEALCLMGKMR-S 256 Query: 700 HECVPNTVTFNCLIDGFCKSGEIE 771 +C P T TFNCLI+G+C+SGEIE Sbjct: 257 DQCAPTTATFNCLINGYCRSGEIE 280 Score = 85.1 bits (209), Expect = 2e-14 Identities = 67/231 (29%), Positives = 114/231 (49%), Gaps = 3/231 (1%) Frame = +1 Query: 55 LRNTNVL-NVVIDVLLKSGRVDDALKLLDEMLEPSTNVPPNENTSDTVFGELSRGNVSEK 231 L+ NV V I+ ++ A++ LDEM + P + G G + + Sbjct: 329 LKGNNVTYTVFINAFCNVNNMNKAMEFLDEMSKDGC-FPDAVVYYTLICGLAQAGRLDDA 387 Query: 232 EIVELVSKFGKHGVFPSEMWLSQLIMKFCRKGNTNSAWEILHEAMKLGGIA-NVGSCNAL 408 V VSK + G + + LI +FC+K + A E L+E M+L G+ + + N L Sbjct: 388 SSV--VSKLKEAGFCLDRVCYNVLISEFCKKNKLDRAQEWLNE-MELAGVKPDSVTYNTL 444 Query: 409 LKGLHIKGDFKRMNMLLQDM-KDNNIHPNVVTFGILIYHLCKFRRIDVALDVFKKMSEGS 585 + G+FK + ++ M ++ + P V T+G LI+ C ID A+ +FK+M+ + Sbjct: 445 ISYFSKIGNFKLAHKFMKKMTEEEGLSPTVFTYGALIHAYCLNNNIDEAIKIFKEMNNVA 504 Query: 586 EGILVKPDVILYNTLIDGLCKVGRQEEGLDLMEQMRLQHECVPNTVTFNCL 738 V P+ ++YN LID LCK + L L++ M+ + +PNT T+N + Sbjct: 505 S--KVPPNTVIYNILIDSLCKQTQVNFALSLLDDMKFR-GVMPNTTTYNSI 552 Score = 79.7 bits (195), Expect = 7e-13 Identities = 61/238 (25%), Positives = 103/238 (43%) Frame = +1 Query: 64 TNVLNVVIDVLLKSGRVDDALKLLDEMLEPSTNVPPNENTSDTVFGELSRGNVSEKEIVE 243 T N +I+ +SG ++ A KL +EM + + PN T +T+ + + N VE Sbjct: 263 TATFNCLINGYCRSGEIEVAHKLFNEM--ENAQIEPNVITLNTLVDGMCKHN-RISTAVE 319 Query: 244 LVSKFGKHGVFPSEMWLSQLIMKFCRKGNTNSAWEILHEAMKLGGIANVGSCNALLKGLH 423 + G+ + + + I FC N N A E L E K G + L+ GL Sbjct: 320 FFRVMQQKGLKGNNVTYTVFINAFCNVNNMNKAMEFLDEMSKDGCFPDAVVYYTLICGLA 379 Query: 424 IKGDFKRMNMLLQDMKDNNIHPNVVTFGILIYHLCKFRRIDVALDVFKKMSEGSEGILVK 603 G + ++ +K+ + V + +LI CK ++D A + +M VK Sbjct: 380 QAGRLDDASSVVSKLKEAGFCLDRVCYNVLISEFCKKNKLDRAQEWLNEMELAG----VK 435 Query: 604 PDVILYNTLIDGLCKVGRQEEGLDLMEQMRLQHECVPNTVTFNCLIDGFCKSGEIERS 777 PD + YNTLI K+G + M++M + P T+ LI +C + I+ + Sbjct: 436 PDSVTYNTLISYFSKIGNFKLAHKFMKKMTEEEGLSPTVFTYGALIHAYCLNNNIDEA 493 Score = 79.0 bits (193), Expect = 1e-12 Identities = 64/259 (24%), Positives = 110/259 (42%), Gaps = 3/259 (1%) Frame = +1 Query: 1 RARMVEEALLAYNYLDPELRNTNV--LNVVIDVLLKSGRVDDALKLLDEMLEPSTNVPPN 174 R+ +E A +N ++ NV LN ++D + K R+ A++ M + Sbjct: 275 RSGEIEVAHKLFNEMENAQIEPNVITLNTLVDGMCKHNRISTAVEFFRVMQQKGLK---G 331 Query: 175 ENTSDTVFGELSRGNVSEKEIVELVSKFGKHGVFPSEMWLSQLIMKFCRKGNTNSAWEIL 354 N + TVF + + +E + + K G FP + LI + G + A ++ Sbjct: 332 NNVTYTVFINAFCNVNNMNKAMEFLDEMSKDGCFPDAVVYYTLICGLAQAGRLDDASSVV 391 Query: 355 HEAMKLGGIANVGSCNALLKGLHIKGDFKRMNMLLQDMKDNNIHPNVVTFGILIYHLCKF 534 + + G + N L+ K R L +M+ + P+ VT+ LI + K Sbjct: 392 SKLKEAGFCLDRVCYNVLISEFCKKNKLDRAQEWLNEMELAGVKPDSVTYNTLISYFSKI 451 Query: 535 RRIDVALDVFKKMSEGSEGILVKPDVILYNTLIDGLCKVGRQEEGLDLMEQMR-LQHECV 711 +A KKM+E EG+ P V Y LI C +E + + ++M + + Sbjct: 452 GNFKLAHKFMKKMTE-EEGL--SPTVFTYGALIHAYCLNNNIDEAIKIFKEMNNVASKVP 508 Query: 712 PNTVTFNCLIDGFCKSGEI 768 PNTV +N LID CK ++ Sbjct: 509 PNTVIYNILIDSLCKQTQV 527 Score = 72.8 bits (177), Expect = 8e-11 Identities = 63/285 (22%), Positives = 118/285 (41%), Gaps = 37/285 (12%) Frame = +1 Query: 37 NYLDPELRNTNV------LNVVIDVLLKSGRVDDALKLLDEMLEPSTNVPPNENTSDTVF 198 N L ++++ N+ ++I+ L K R+DDAL++ ++M Sbjct: 172 NLLMRKMKDMNIQPTVITFGILINHLCKFRRIDDALEVFEKM------------------ 213 Query: 199 GELSRGNVSEKEIVELVSKFGKHGVFPSEMWLSQLIMKFCRKGNTNSAWEILHEAMKLGG 378 +G E ++ V P + + LI C+ G A ++ + Sbjct: 214 ----KGEKEETKVF----------VAPDTIMYNTLIDGLCKVGRQEEALCLMGKMRSDQC 259 Query: 379 IANVGSCNALLKGLHIKGDFKRMNMLLQDMKDNNIHPNVVTFGILIYHLCKFRRIDVALD 558 + N L+ G G+ + + L +M++ I PNV+T L+ +CK RI A++ Sbjct: 260 APTTATFNCLINGYCRSGEIEVAHKLFNEMENAQIEPNVITLNTLVDGMCKHNRISTAVE 319 Query: 559 VFKKMSE-GSEGILVK------------------------------PDVILYNTLIDGLC 645 F+ M + G +G V PD ++Y TLI GL Sbjct: 320 FFRVMQQKGLKGNNVTYTVFINAFCNVNNMNKAMEFLDEMSKDGCFPDAVVYYTLICGLA 379 Query: 646 KVGRQEEGLDLMEQMRLQHECVPNTVTFNCLIDGFCKSGEIERSQ 780 + GR ++ ++ +++ C+ + V +N LI FCK +++R+Q Sbjct: 380 QAGRLDDASSVVSKLKEAGFCL-DRVCYNVLISEFCKKNKLDRAQ 423 >ref|XP_003548443.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520, mitochondrial-like [Glycine max] Length = 746 Score = 242 bits (618), Expect = 6e-62 Identities = 130/262 (49%), Positives = 176/262 (67%), Gaps = 4/262 (1%) Frame = +1 Query: 4 ARMVEEALLAYNYLDPELRNTNVLNVVIDVLLKSGRVDDALKLLDEMLEPSTNVPPNENT 183 AR+V ++LL +N LDP ++ + + ++ VLLKSGR DAL +LDEM + ++ T Sbjct: 154 ARLVNDSLLLFNQLDPSSKSPQLCHGLLRVLLKSGRAGDALHVLDEMPQANSGFSV---T 210 Query: 184 SDTVFGELSRGNVS--EKEIVELVSKFGKHGVFPSEMWLSQLIMKFCRKGNTNSAWEILH 357 + VFGEL R S + E+V LV+K G+ GVFP L+QL+ K C AWE+LH Sbjct: 211 GEIVFGELVRSGRSFPDGEVVGLVAKLGERGVFPDGFKLTQLVGKLCGDQKNGVAWEVLH 270 Query: 358 EAMKLGGIANVGSCNALLKGLHIKGDFKRMNMLLQDMKDNNIHPNVVTFGILIYHLCKFR 537 M+LGG + SCNALL L D KRMN LL +M+ I P+VVTFGIL+ HLCK R Sbjct: 271 CVMRLGGAVDAASCNALLTWLGRGRDIKRMNELLAEMEKRKIRPSVVTFGILVNHLCKAR 330 Query: 538 RIDVALDVFKKM--SEGSEGILVKPDVILYNTLIDGLCKVGRQEEGLDLMEQMRLQHECV 711 RID AL VF ++ GS + V+PDV+L+NTLIDGLCKVG++E+GL L+E+M++ + Sbjct: 331 RIDEALQVFDRLRGKGGSNWVGVEPDVVLFNTLIDGLCKVGKEEDGLSLLEEMKMGNINR 390 Query: 712 PNTVTFNCLIDGFCKSGEIERS 777 PNTVT+NCLIDGF K+G +R+ Sbjct: 391 PNTVTYNCLIDGFFKAGNFDRA 412 Score = 91.7 bits (226), Expect = 2e-16 Identities = 60/229 (26%), Positives = 107/229 (46%) Frame = +1 Query: 61 NTNVLNVVIDVLLKSGRVDDALKLLDEMLEPSTNVPPNENTSDTVFGELSRGNVSEKEIV 240 N +I ++ A++ +EML + P + G G +++ +V Sbjct: 462 NAATYTALISAFCGVNNINRAMQCFEEMLSSGCS-PDAVVYYSLISGLCIAGRMNDASVV 520 Query: 241 ELVSKFGKHGVFPSEMWLSQLIMKFCRKGNTNSAWEILHEAMKLGGIANVGSCNALLKGL 420 VSK G + LI FC+K +E+L E + G + + N L+ L Sbjct: 521 --VSKLKLAGFSLDRSCYNVLISGFCKKKKLERVYELLTEMEETGVKPDTITYNTLISYL 578 Query: 421 HIKGDFKRMNMLLQDMKDNNIHPNVVTFGILIYHLCKFRRIDVALDVFKKMSEGSEGILV 600 GDF + +++ M + P+VVT+G +I+ C + +D + +F +M S+ V Sbjct: 579 GKTGDFATASKVMEKMIKEGLRPSVVTYGAIIHAYCSKKNVDEGMKIFGEMCSTSK---V 635 Query: 601 KPDVILYNTLIDGLCKVGRQEEGLDLMEQMRLQHECVPNTVTFNCLIDG 747 P+ ++YN LID LC+ + + LME M+++ PNT T+N ++ G Sbjct: 636 PPNTVIYNILIDALCRNNDVDRAISLMEDMKVK-RVRPNTTTYNAILKG 683 Score = 91.3 bits (225), Expect = 2e-16 Identities = 66/240 (27%), Positives = 111/240 (46%), Gaps = 1/240 (0%) Frame = +1 Query: 61 NTNVLNVVIDVLLKSGRVDDALKLLDEMLEPSTNVPPNENTSDTVFGELSRGNVSEKEIV 240 N LN ++D L K GRV A++ +EM + N T + N + + Sbjct: 427 NVITLNTLVDGLCKHGRVHRAVEFFNEM--KGKGLKGNAATYTALISAFCGVN-NINRAM 483 Query: 241 ELVSKFGKHGVFPSEMWLSQLIMKFCRKGNTNSAWEILHEAMKLGGIANVGSC-NALLKG 417 + + G P + LI C G N A ++ +KL G + SC N L+ G Sbjct: 484 QCFEEMLSSGCSPDAVVYYSLISGLCIAGRMNDA-SVVVSKLKLAGFSLDRSCYNVLISG 542 Query: 418 LHIKGDFKRMNMLLQDMKDNNIHPNVVTFGILIYHLCKFRRIDVALDVFKKMSEGSEGIL 597 K +R+ LL +M++ + P+ +T+ LI +L K A V +KM + EG+ Sbjct: 543 FCKKKKLERVYELLTEMEETGVKPDTITYNTLISYLGKTGDFATASKVMEKMIK--EGL- 599 Query: 598 VKPDVILYNTLIDGLCKVGRQEEGLDLMEQMRLQHECVPNTVTFNCLIDGFCKSGEIERS 777 +P V+ Y +I C +EG+ + +M + PNTV +N LID C++ +++R+ Sbjct: 600 -RPSVVTYGAIIHAYCSKKNVDEGMKIFGEMCSTSKVPPNTVIYNILIDALCRNNDVDRA 658 Score = 81.6 bits (200), Expect = 2e-13 Identities = 52/169 (30%), Positives = 79/169 (46%), Gaps = 2/169 (1%) Frame = +1 Query: 268 GVFPSEMWLSQLIMKFCRKGNTNSAWEILHEAMKLGGI--ANVGSCNALLKGLHIKGDFK 441 GV P + + LI C+ G +L E MK+G I N + N L+ G G+F Sbjct: 352 GVEPDVVLFNTLIDGLCKVGKEEDGLSLLEE-MKMGNINRPNTVTYNCLIDGFFKAGNFD 410 Query: 442 RMNMLLQDMKDNNIHPNVVTFGILIYHLCKFRRIDVALDVFKKMSEGSEGILVKPDVILY 621 R + L + M + + PNV+T L+ LCK R+ A++ F +M +G +K + Y Sbjct: 411 RAHELFRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEM----KGKGLKGNAATY 466 Query: 622 NTLIDGLCKVGRQEEGLDLMEQMRLQHECVPNTVTFNCLIDGFCKSGEI 768 LI C V + E+M L C P+ V + LI G C +G + Sbjct: 467 TALISAFCGVNNINRAMQCFEEM-LSSGCSPDAVVYYSLISGLCIAGRM 514 Score = 60.8 bits (146), Expect = 3e-07 Identities = 51/199 (25%), Positives = 89/199 (44%), Gaps = 2/199 (1%) Frame = +1 Query: 76 NVVIDVLLKSGRVDDALKLLDEMLEPSTNVPPNENTSDTVFGELSR-GNVSEKEIVELVS 252 NV+I K +++ +LL EM E T V P+ T +T+ L + G+ + +++ Sbjct: 537 NVLISGFCKKKKLERVYELLTEMEE--TGVKPDTITYNTLISYLGKTGDFATAS--KVME 592 Query: 253 KFGKHGVFPSEMWLSQLIMKFCRKGNTNSAWEILHEAMKLGGIA-NVGSCNALLKGLHIK 429 K K G+ PS + +I +C K N + +I E + N N L+ L Sbjct: 593 KMIKEGLRPSVVTYGAIIHAYCSKKNVDEGMKIFGEMCSTSKVPPNTVIYNILIDALCRN 652 Query: 430 GDFKRMNMLLQDMKDNNIHPNVVTFGILIYHLCKFRRIDVALDVFKKMSEGSEGILVKPD 609 D R L++DMK + PN T+ ++ + + + A ++ +M E + +PD Sbjct: 653 NDVDRAISLMEDMKVKRVRPNTTTYNAILKGVRDKKMLHKAFELMDRMVEEA----CRPD 708 Query: 610 VILYNTLIDGLCKVGRQEE 666 I L + L VG E+ Sbjct: 709 YITMEVLTEWLSAVGEIEK 727 >ref|XP_002878387.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata subsp. lyrata] gi|297324225|gb|EFH54646.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata subsp. lyrata] Length = 766 Score = 239 bits (609), Expect = 6e-61 Identities = 121/263 (46%), Positives = 176/263 (66%), Gaps = 3/263 (1%) Frame = +1 Query: 1 RARMVEEALLAYNYLDPELRNTNVLNVVIDVLLKSGRVDDALKLLDEMLEPSTNVPPNEN 180 R M +++L Y LD ++N+ V NVVIDVLL++G VDDA K+LDEML+ + PPN Sbjct: 164 RMGMANQSVLVYERLDSNMKNSQVRNVVIDVLLRNGLVDDAFKVLDEMLQKESVFPPNRI 223 Query: 181 TSDTVFGELSRGNV-SEKEIVELVSKFGKHGVFPSEMWLSQLIMKFCRKGNTNSAWEILH 357 T+D V E+ +G + +E++I+ L+S+F HGV P+ +WL++ I C+ TN+AW+IL Sbjct: 224 TADIVLHEVWKGRLLTEEKIIGLISRFSSHGVSPNSVWLTRFISSLCKNARTNAAWDILS 283 Query: 358 EAMKLGGIANVGSCNALLKGLHIKGDFKRMNMLLQDMKDNNIHPNVVTFGILIYHLCKFR 537 + MK NALL L + RMN L+ M + I P+VVT GILI LCK R Sbjct: 284 DLMKNKAPLEAPPFNALLSCLGRNMNIGRMNALVLKMDEMKIRPDVVTLGILINTLCKSR 343 Query: 538 RIDVALDVFKKM--SEGSEGILVKPDVILYNTLIDGLCKVGRQEEGLDLMEQMRLQHECV 711 R+D AL VF++M +G ++K D I +NTLIDGLCKVGR +E +L+ +M+++ CV Sbjct: 344 RVDEALQVFEQMCGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKMEERCV 403 Query: 712 PNTVTFNCLIDGFCKSGEIERSQ 780 PNTVT+NCLIDG+C++G++E ++ Sbjct: 404 PNTVTYNCLIDGYCRAGKLETAK 426 Score = 83.2 bits (204), Expect = 6e-14 Identities = 65/240 (27%), Positives = 114/240 (47%), Gaps = 6/240 (2%) Frame = +1 Query: 73 LNVVIDVLLKSGRVDDALKLLDEMLEPSTNVPPNENTSDTVF------GELSRGNVSEKE 234 L ++I+ L KS RVD+AL++ ++M T+ N +D++ G G + E E Sbjct: 332 LGILINTLCKSRRVDEALQVFEQMCGKRTD-DGNVIKADSIHFNTLIDGLCKVGRLKEAE 390 Query: 235 IVELVSKFGKHGVFPSEMWLSQLIMKFCRKGNTNSAWEILHEAMKLGGIANVGSCNALLK 414 + + K + V P+ + + LI +CR G +A E++ + G +V + N ++ Sbjct: 391 ELLVRMKMEERCV-PNTVTYNCLIDGYCRAGKLETAKEVVSRMKEDGIKPDVVTVNTIVG 449 Query: 415 GLHIKGDFKRMNMLLQDMKDNNIHPNVVTFGILIYHLCKFRRIDVALDVFKKMSEGSEGI 594 G+ + DM+ + NVVT+ LI+ C I+ A+ F KM E Sbjct: 450 GMCRHHGLNMAVLFFMDMEKEGVKGNVVTYMTLIHACCSLSNIEKAMHWFDKMLEAG--- 506 Query: 595 LVKPDVILYNTLIDGLCKVGRQEEGLDLMEQMRLQHECVPNTVTFNCLIDGFCKSGEIER 774 PD +Y LI GLC+V R + + ++E++R + + + +N LI FC E+ Sbjct: 507 -CSPDAKIYYALISGLCQVRRDHDAIRVVEKLR-EGGFSLDLLAYNMLIGLFCDKNNAEK 564 Score = 78.6 bits (192), Expect = 1e-12 Identities = 60/241 (24%), Positives = 112/241 (46%), Gaps = 2/241 (0%) Frame = +1 Query: 22 ALLAYNYLDPELRNTNVLN--VVIDVLLKSGRVDDALKLLDEMLEPSTNVPPNENTSDTV 195 A+L + ++ E NV+ +I ++ A+ D+MLE + P+ + Sbjct: 460 AVLFFMDMEKEGVKGNVVTYMTLIHACCSLSNIEKAMHWFDKMLEAGCS--PDAKIYYAL 517 Query: 196 FGELSRGNVSEKEIVELVSKFGKHGVFPSEMWLSQLIMKFCRKGNTNSAWEILHEAMKLG 375 L + + + + +V K + G + + LI FC K N +E+L + K G Sbjct: 518 ISGLCQVR-RDHDAIRVVEKLREGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEG 576 Query: 376 GIANVGSCNALLKGLHIKGDFKRMNMLLQDMKDNNIHPNVVTFGILIYHLCKFRRIDVAL 555 + + N L+ DF+ + +++ M+++ + P V T+G +I C + AL Sbjct: 577 MKPDSITYNTLISFFGKHKDFESVERMMEQMREDELDPTVATYGAVIEAYCSVGELGEAL 636 Query: 556 DVFKKMSEGSEGILVKPDVILYNTLIDGLCKVGRQEEGLDLMEQMRLQHECVPNTVTFNC 735 +FK M S+ V P+ ++YN LI+ K+G + L L E+M+++ PN T+N Sbjct: 637 KLFKDMGLRSK---VNPNTVIYNILINAFSKLGNFGQALSLKEEMKMK-MVRPNVETYNA 692 Query: 736 L 738 L Sbjct: 693 L 693 Score = 69.3 bits (168), Expect = 9e-10 Identities = 74/297 (24%), Positives = 119/297 (40%), Gaps = 41/297 (13%) Frame = +1 Query: 1 RARMVEEALLAYNYL-DPELRNTNVL-------NVVIDVLLKSGRVDDALKLLDEMLEPS 156 ++R V+EAL + + + NV+ N +ID L K GR+ +A +LL M Sbjct: 341 KSRRVDEALQVFEQMCGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKMEE 400 Query: 157 TNVPPNENTSDTVFGELSRGNVSEKEIVELVSKFGKHGVFPSEMWLSQLIMKFCRKGNTN 336 VP + + G G + + E+VS+ + G+ P + ++ ++ CR N Sbjct: 401 RCVPNTVTYNCLIDGYCRAGKLETAK--EVVSRMKEDGIKPDVVTVNTIVGGMCRHHGLN 458 Query: 337 SAWEILHEAMKLGGIANVGSCNALLKGLHIKGDFKRMNMLLQDMKDNNIHPNVVTFGILI 516 A + K G NV + L+ + ++ M + P+ + LI Sbjct: 459 MAVLFFMDMEKEGVKGNVVTYMTLIHACCSLSNIEKAMHWFDKMLEAGCSPDAKIYYALI 518 Query: 517 YHLCKFRRIDVALDVFKKMSEGS---------------------------------EGIL 597 LC+ RR A+ V +K+ EG EG+ Sbjct: 519 SGLCQVRRDHDAIRVVEKLREGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGM- 577 Query: 598 VKPDVILYNTLIDGLCKVGRQEEGLDLMEQMRLQHECVPNTVTFNCLIDGFCKSGEI 768 KPD I YNTLI K E +MEQMR + E P T+ +I+ +C GE+ Sbjct: 578 -KPDSITYNTLISFFGKHKDFESVERMMEQMR-EDELDPTVATYGAVIEAYCSVGEL 632 Score = 68.9 bits (167), Expect = 1e-09 Identities = 64/288 (22%), Positives = 120/288 (41%), Gaps = 34/288 (11%) Frame = +1 Query: 1 RARMVEEALLAYNYLDPELRNTNVLNVVIDVLLKSGRVDDALKLLDEMLEPSTNVPPNEN 180 R + EE L+ + + NT N +ID ++G+++ A +++ M E + P+ Sbjct: 385 RLKEAEELLVRMKMEERCVPNTVTYNCLIDGYCRAGKLETAKEVVSRMKEDG--IKPDVV 442 Query: 181 TSDTVFGELSR--------------------GNV--------------SEKEIVELVSKF 258 T +T+ G + R GNV + ++ + K Sbjct: 443 TVNTIVGGMCRHHGLNMAVLFFMDMEKEGVKGNVVTYMTLIHACCSLSNIEKAMHWFDKM 502 Query: 259 GKHGVFPSEMWLSQLIMKFCRKGNTNSAWEILHEAMKLGGIANVGSCNALLKGLHIKGDF 438 + G P LI C+ + A ++ + + G ++ + N L+ K + Sbjct: 503 LEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLREGGFSLDLLAYNMLIGLFCDKNNA 562 Query: 439 KRMNMLLQDMKDNNIHPNVVTFGILIYHLCKFRRIDVALDVFKKMSEGSEGILVKPDVIL 618 +++ +L DM+ + P+ +T+ LI K + + + ++M E + P V Sbjct: 563 EKVYEMLTDMEKEGMKPDSITYNTLISFFGKHKDFESVERMMEQMREDE----LDPTVAT 618 Query: 619 YNTLIDGLCKVGRQEEGLDLMEQMRLQHECVPNTVTFNCLIDGFCKSG 762 Y +I+ C VG E L L + M L+ + PNTV +N LI+ F K G Sbjct: 619 YGAVIEAYCSVGELGEALKLFKDMGLRSKVNPNTVIYNILINAFSKLG 666