BLASTX nr result

ID: Panax21_contig00020752 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00020752
         (716 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632676.1| PREDICTED: uncharacterized protein LOC100253...   234   2e-59
emb|CBI29924.3| unnamed protein product [Vitis vinifera]              234   2e-59
emb|CAN83573.1| hypothetical protein VITISV_041710 [Vitis vinifera]   234   2e-59
ref|XP_003624606.1| CCR4-NOT transcription complex subunit [Medi...   231   1e-58
ref|XP_002525444.1| conserved hypothetical protein [Ricinus comm...   227   2e-57

>ref|XP_003632676.1| PREDICTED: uncharacterized protein LOC100253711 [Vitis vinifera]
          Length = 888

 Score =  234 bits (596), Expect = 2e-59
 Identities = 105/119 (88%), Positives = 112/119 (94%), Gaps = 1/119 (0%)
 Frame = +3

Query: 3    PQPKDSERAKNYTPRHPAATPSSYPQGQAPIVNNPTFWERLGADNFGTDTLFFSFYYQQN 182
            PQPKDSERA+NYTPRHPA TP SYPQ QAPIVNNP FWERLG D FGTDTLFF+FYYQQN
Sbjct: 748  PQPKDSERARNYTPRHPAVTPPSYPQVQAPIVNNPAFWERLGLDTFGTDTLFFAFYYQQN 807

Query: 183  TYQQYLAAKELKKQSWRYHKKYNTWFQRHEEPKVATDDYEQGTYVYFDFHI-SDELQHG 356
            TYQQYLAAKELKKQSWRYH+KYNTWFQRHEEPKVATD++EQGTYVYFDFHI +D+LQHG
Sbjct: 808  TYQQYLAAKELKKQSWRYHRKYNTWFQRHEEPKVATDEFEQGTYVYFDFHIANDDLQHG 866


>emb|CBI29924.3| unnamed protein product [Vitis vinifera]
          Length = 897

 Score =  234 bits (596), Expect = 2e-59
 Identities = 105/119 (88%), Positives = 112/119 (94%), Gaps = 1/119 (0%)
 Frame = +3

Query: 3    PQPKDSERAKNYTPRHPAATPSSYPQGQAPIVNNPTFWERLGADNFGTDTLFFSFYYQQN 182
            PQPKDSERA+NYTPRHPA TP SYPQ QAPIVNNP FWERLG D FGTDTLFF+FYYQQN
Sbjct: 757  PQPKDSERARNYTPRHPAVTPPSYPQVQAPIVNNPAFWERLGLDTFGTDTLFFAFYYQQN 816

Query: 183  TYQQYLAAKELKKQSWRYHKKYNTWFQRHEEPKVATDDYEQGTYVYFDFHI-SDELQHG 356
            TYQQYLAAKELKKQSWRYH+KYNTWFQRHEEPKVATD++EQGTYVYFDFHI +D+LQHG
Sbjct: 817  TYQQYLAAKELKKQSWRYHRKYNTWFQRHEEPKVATDEFEQGTYVYFDFHIANDDLQHG 875


>emb|CAN83573.1| hypothetical protein VITISV_041710 [Vitis vinifera]
          Length = 214

 Score =  234 bits (596), Expect = 2e-59
 Identities = 105/119 (88%), Positives = 112/119 (94%), Gaps = 1/119 (0%)
 Frame = +3

Query: 3   PQPKDSERAKNYTPRHPAATPSSYPQGQAPIVNNPTFWERLGADNFGTDTLFFSFYYQQN 182
           PQPKDSERA+NYTPRHPA TP SYPQ QAPIVNNP FWERLG D FGTDTLFF+FYYQQN
Sbjct: 74  PQPKDSERARNYTPRHPAVTPPSYPQVQAPIVNNPAFWERLGLDTFGTDTLFFAFYYQQN 133

Query: 183 TYQQYLAAKELKKQSWRYHKKYNTWFQRHEEPKVATDDYEQGTYVYFDFHI-SDELQHG 356
           TYQQYLAAKELKKQSWRYH+KYNTWFQRHEEPKVATD++EQGTYVYFDFHI +D+LQHG
Sbjct: 134 TYQQYLAAKELKKQSWRYHRKYNTWFQRHEEPKVATDEFEQGTYVYFDFHIANDDLQHG 192


>ref|XP_003624606.1| CCR4-NOT transcription complex subunit [Medicago truncatula]
            gi|124365585|gb|ABN09819.1| Not CCR4-Not complex
            component, N-terminal; tRNA-binding arm [Medicago
            truncatula] gi|355499621|gb|AES80824.1| CCR4-NOT
            transcription complex subunit [Medicago truncatula]
          Length = 901

 Score =  231 bits (588), Expect = 1e-58
 Identities = 104/119 (87%), Positives = 111/119 (93%), Gaps = 1/119 (0%)
 Frame = +3

Query: 3    PQPKDSERAKNYTPRHPAATPSSYPQGQAPIVNNPTFWERLGADNFGTDTLFFSFYYQQN 182
            PQP+DSER + YTPRHPA TPSSYPQ QAPIVNNP FWERLG + FGTDTLFF+FYYQQN
Sbjct: 762  PQPRDSERPRTYTPRHPAITPSSYPQVQAPIVNNPAFWERLGLEPFGTDTLFFAFYYQQN 821

Query: 183  TYQQYLAAKELKKQSWRYHKKYNTWFQRHEEPKVATDDYEQGTYVYFDFHI-SDELQHG 356
            TYQQYLAAKELKKQSWRYH+KYNTWFQRHEEPKVATDDYEQGTYVYFDFHI +D+LQHG
Sbjct: 822  TYQQYLAAKELKKQSWRYHRKYNTWFQRHEEPKVATDDYEQGTYVYFDFHIANDDLQHG 880


>ref|XP_002525444.1| conserved hypothetical protein [Ricinus communis]
            gi|223535257|gb|EEF36934.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 889

 Score =  227 bits (579), Expect = 2e-57
 Identities = 101/119 (84%), Positives = 112/119 (94%), Gaps = 1/119 (0%)
 Frame = +3

Query: 3    PQPKDSERAKNYTPRHPAATPSSYPQGQAPIVNNPTFWERLGADNFGTDTLFFSFYYQQN 182
            PQPKDSERA++YTPRHP ATP SYPQ QAPIVNNP FWERL  D++GTDTLFF+FYYQQN
Sbjct: 749  PQPKDSERARSYTPRHPTATPPSYPQVQAPIVNNPAFWERLTIDSYGTDTLFFAFYYQQN 808

Query: 183  TYQQYLAAKELKKQSWRYHKKYNTWFQRHEEPKVATDDYEQGTYVYFDFHI-SDELQHG 356
            T+QQYLAAKELKKQSWRYH+KYNTWFQRHEEPK+ATD+YEQGTYVYFDFHI +D+LQHG
Sbjct: 809  THQQYLAAKELKKQSWRYHRKYNTWFQRHEEPKIATDEYEQGTYVYFDFHIANDDLQHG 867


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