BLASTX nr result

ID: Panax21_contig00020751 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00020751
         (571 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACF78995.1| unknown [Zea mays] gi|413947141|gb|AFW79790.1| hy...   109   3e-22
dbj|BAC43533.1| putative transcriptional regulatory protein [Ara...   108   6e-22
ref|NP_001190311.1| paired amphipathic helix protein Sin3-like 2...   108   6e-22
ref|XP_002455329.1| hypothetical protein SORBIDRAFT_03g008490 [S...   108   6e-22
ref|NP_197006.2| paired amphipathic helix protein Sin3-like 2 [A...   108   6e-22

>gb|ACF78995.1| unknown [Zea mays] gi|413947141|gb|AFW79790.1| hypothetical protein
           ZEAMMB73_045892 [Zea mays]
          Length = 572

 Score =  109 bits (273), Expect = 3e-22
 Identities = 59/134 (44%), Positives = 80/134 (59%)
 Frame = -1

Query: 421 QEVEKVELNAARRTVSDALNYIYSVKVAFGGKSEEYHGFRDLMLDFKALRITTSGVISRV 242
           Q+     L   + T +DAL Y+ +VK  F  K E+Y  F ++M DFK+ RI T+GVI RV
Sbjct: 56  QQTSGAALTNQKLTTNDALVYLKAVKDKFQDKREKYEEFLEVMRDFKSERIDTNGVIGRV 115

Query: 241 KVLFVNHPELLEGLNPFLPTGYKISVPCSSKSGFDFEEAMRFVNRVKEAFPHDKVCYASF 62
           K LF  +PEL+ G N FLP GY I +    K   DF EA+ FVN++K  F HD+  Y +F
Sbjct: 116 KTLFNGYPELILGFNAFLPKGYAIKLQ-EEKKPVDFVEAINFVNKIKNRFQHDERVYKAF 174

Query: 61  LKLLNGHHNANMNI 20
           L +LN +   N +I
Sbjct: 175 LDILNMYRKDNKSI 188


>dbj|BAC43533.1| putative transcriptional regulatory protein [Arabidopsis thaliana]
          Length = 543

 Score =  108 bits (270), Expect = 6e-22
 Identities = 57/130 (43%), Positives = 81/130 (62%), Gaps = 3/130 (2%)
 Frame = -1

Query: 400 LNAARRTVSDALNYIYSVKVAFGGKSEEYHGFRDLMLDFKALRITTSGVISRVKVLFVNH 221
           +N  + T  DAL Y+  VK  F  + ++Y  F ++M DFKA +  TSGVISRVK LF  H
Sbjct: 43  INTQKLTTDDALTYLKEVKEMFQDQRDKYDMFLEVMKDFKAQKTDTSGVISRVKELFKGH 102

Query: 220 PELLEGLNPFLPTGYKIS---VPCSSKSGFDFEEAMRFVNRVKEAFPHDKVCYASFLKLL 50
             L+ G N FLP G++I+   V   SK   +FEEA+ FVN++K  F H+++ Y SFL++L
Sbjct: 103 NNLIFGFNTFLPKGFEITLDDVEAPSKKTVEFEEAISFVNKIKTRFQHNELVYKSFLEIL 162

Query: 49  NGHHNANMNI 20
           N +   N +I
Sbjct: 163 NMYRKDNKDI 172


>ref|NP_001190311.1| paired amphipathic helix protein Sin3-like 2 [Arabidopsis thaliana]
           gi|332004723|gb|AED92106.1| paired amphipathic helix
           protein Sin3-like 2 [Arabidopsis thaliana]
          Length = 1355

 Score =  108 bits (270), Expect = 6e-22
 Identities = 57/130 (43%), Positives = 81/130 (62%), Gaps = 3/130 (2%)
 Frame = -1

Query: 400 LNAARRTVSDALNYIYSVKVAFGGKSEEYHGFRDLMLDFKALRITTSGVISRVKVLFVNH 221
           +N  + T  DAL Y+  VK  F  + ++Y  F ++M DFKA +  TSGVISRVK LF  H
Sbjct: 43  INTQKLTTDDALTYLKEVKEMFQDQRDKYDMFLEVMKDFKAQKTDTSGVISRVKELFKGH 102

Query: 220 PELLEGLNPFLPTGYKIS---VPCSSKSGFDFEEAMRFVNRVKEAFPHDKVCYASFLKLL 50
             L+ G N FLP G++I+   V   SK   +FEEA+ FVN++K  F H+++ Y SFL++L
Sbjct: 103 NNLIFGFNTFLPKGFEITLDDVEAPSKKTVEFEEAISFVNKIKTRFQHNELVYKSFLEIL 162

Query: 49  NGHHNANMNI 20
           N +   N +I
Sbjct: 163 NMYRKDNKDI 172


>ref|XP_002455329.1| hypothetical protein SORBIDRAFT_03g008490 [Sorghum bicolor]
           gi|241927304|gb|EES00449.1| hypothetical protein
           SORBIDRAFT_03g008490 [Sorghum bicolor]
          Length = 1441

 Score =  108 bits (270), Expect = 6e-22
 Identities = 59/134 (44%), Positives = 80/134 (59%)
 Frame = -1

Query: 421 QEVEKVELNAARRTVSDALNYIYSVKVAFGGKSEEYHGFRDLMLDFKALRITTSGVISRV 242
           Q+     L   + T +DAL Y+ +VK  F  K E+Y  F ++M DFK+ RI T+GVI RV
Sbjct: 57  QQPSGAALTNQKLTTNDALVYLKAVKDKFQDKREKYEEFLEVMRDFKSERIDTNGVIVRV 116

Query: 241 KVLFVNHPELLEGLNPFLPTGYKISVPCSSKSGFDFEEAMRFVNRVKEAFPHDKVCYASF 62
           K LF  +PEL+ G N FLP GY I +    K   DF EA+ FVN++K  F HD+  Y +F
Sbjct: 117 KTLFNGYPELILGFNAFLPKGYAIKLQ-EEKKPVDFVEAINFVNKIKNRFQHDEQVYKAF 175

Query: 61  LKLLNGHHNANMNI 20
           L +LN +   N +I
Sbjct: 176 LDILNMYRKDNKSI 189


>ref|NP_197006.2| paired amphipathic helix protein Sin3-like 2 [Arabidopsis thaliana]
           gi|296439819|sp|Q9LFQ3.2|SNL2_ARATH RecName: Full=Paired
           amphipathic helix protein Sin3-like 2
           gi|332004722|gb|AED92105.1| paired amphipathic helix
           protein Sin3-like 2 [Arabidopsis thaliana]
          Length = 1367

 Score =  108 bits (270), Expect = 6e-22
 Identities = 57/130 (43%), Positives = 81/130 (62%), Gaps = 3/130 (2%)
 Frame = -1

Query: 400 LNAARRTVSDALNYIYSVKVAFGGKSEEYHGFRDLMLDFKALRITTSGVISRVKVLFVNH 221
           +N  + T  DAL Y+  VK  F  + ++Y  F ++M DFKA +  TSGVISRVK LF  H
Sbjct: 43  INTQKLTTDDALTYLKEVKEMFQDQRDKYDMFLEVMKDFKAQKTDTSGVISRVKELFKGH 102

Query: 220 PELLEGLNPFLPTGYKIS---VPCSSKSGFDFEEAMRFVNRVKEAFPHDKVCYASFLKLL 50
             L+ G N FLP G++I+   V   SK   +FEEA+ FVN++K  F H+++ Y SFL++L
Sbjct: 103 NNLIFGFNTFLPKGFEITLDDVEAPSKKTVEFEEAISFVNKIKTRFQHNELVYKSFLEIL 162

Query: 49  NGHHNANMNI 20
           N +   N +I
Sbjct: 163 NMYRKDNKDI 172


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