BLASTX nr result

ID: Panax21_contig00020712 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00020712
         (604 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271089.2| PREDICTED: anaphase-promoting complex subuni...   311   6e-83
emb|CBI23321.3| unnamed protein product [Vitis vinifera]              311   6e-83
ref|XP_003529297.1| PREDICTED: anaphase-promoting complex subuni...   308   4e-82
ref|XP_002304999.1| predicted protein [Populus trichocarpa] gi|2...   308   6e-82
ref|XP_003608227.1| Anaphase promoting complex subunit [Medicago...   300   1e-79

>ref|XP_002271089.2| PREDICTED: anaphase-promoting complex subunit 4-like [Vitis
           vinifera]
          Length = 767

 Score =  311 bits (797), Expect = 6e-83
 Identities = 152/192 (79%), Positives = 161/192 (83%)
 Frame = +2

Query: 29  METDEAQRVVPFQLQFDKPISSQIKIAEWNPEKDLLAMVTEDSKILLHRFNWQRLWTISP 208
           METDE ++ +PFQLQFDKP+ +QIKIAEWNPEKDLLAMVTEDSKILLHRFNWQRLWTISP
Sbjct: 1   METDEVEQGLPFQLQFDKPVPAQIKIAEWNPEKDLLAMVTEDSKILLHRFNWQRLWTISP 60

Query: 209 GKCITSLCWRPDGKAIAVGLEDGTISLHDVENGKLLQSMKSHAAAVVCLNWEEDGQEIAD 388
           G+CITSLCWRPDGKAIAVGLEDGT+SLHDVENGKLL+SMKSH  AVVCLNWEEDGQ I D
Sbjct: 61  GRCITSLCWRPDGKAIAVGLEDGTVSLHDVENGKLLRSMKSHTVAVVCLNWEEDGQLIGD 120

Query: 389 GCGSISTYEDRTSRFFXXXXXXXXXXXXXXXDTGFMDDGEDSLRELSNSSHQRFNILCSG 568
             G+I  YEDRTSRFF               DTGFMDD EDS  ELSNSSHQRFNILCSG
Sbjct: 121 S-GNILAYEDRTSRFFPPAPRVPRMPGLVSGDTGFMDDSEDSFGELSNSSHQRFNILCSG 179

Query: 569 DKDGIIFFSIFG 604
           DKDG I FSIFG
Sbjct: 180 DKDGSICFSIFG 191


>emb|CBI23321.3| unnamed protein product [Vitis vinifera]
          Length = 771

 Score =  311 bits (797), Expect = 6e-83
 Identities = 152/192 (79%), Positives = 161/192 (83%)
 Frame = +2

Query: 29  METDEAQRVVPFQLQFDKPISSQIKIAEWNPEKDLLAMVTEDSKILLHRFNWQRLWTISP 208
           METDE ++ +PFQLQFDKP+ +QIKIAEWNPEKDLLAMVTEDSKILLHRFNWQRLWTISP
Sbjct: 1   METDEVEQGLPFQLQFDKPVPAQIKIAEWNPEKDLLAMVTEDSKILLHRFNWQRLWTISP 60

Query: 209 GKCITSLCWRPDGKAIAVGLEDGTISLHDVENGKLLQSMKSHAAAVVCLNWEEDGQEIAD 388
           G+CITSLCWRPDGKAIAVGLEDGT+SLHDVENGKLL+SMKSH  AVVCLNWEEDGQ I D
Sbjct: 61  GRCITSLCWRPDGKAIAVGLEDGTVSLHDVENGKLLRSMKSHTVAVVCLNWEEDGQLIGD 120

Query: 389 GCGSISTYEDRTSRFFXXXXXXXXXXXXXXXDTGFMDDGEDSLRELSNSSHQRFNILCSG 568
             G+I  YEDRTSRFF               DTGFMDD EDS  ELSNSSHQRFNILCSG
Sbjct: 121 S-GNILAYEDRTSRFFPPAPRVPRMPGLVSGDTGFMDDSEDSFGELSNSSHQRFNILCSG 179

Query: 569 DKDGIIFFSIFG 604
           DKDG I FSIFG
Sbjct: 180 DKDGSICFSIFG 191


>ref|XP_003529297.1| PREDICTED: anaphase-promoting complex subunit 4 [Glycine max]
          Length = 777

 Score =  308 bits (790), Expect = 4e-82
 Identities = 146/192 (76%), Positives = 161/192 (83%)
 Frame = +2

Query: 29  METDEAQRVVPFQLQFDKPISSQIKIAEWNPEKDLLAMVTEDSKILLHRFNWQRLWTISP 208
           METDE+ RV+PFQLQFDKP++SQIKIAEWNPEKDLLAMVT+DSKILLHRFNWQRLWTI+P
Sbjct: 1   METDESSRVIPFQLQFDKPLASQIKIAEWNPEKDLLAMVTDDSKILLHRFNWQRLWTITP 60

Query: 209 GKCITSLCWRPDGKAIAVGLEDGTISLHDVENGKLLQSMKSHAAAVVCLNWEEDGQEIAD 388
           G+CITSLCWRPDGKAIAVGL+DGT+SLHDVENGKLL+S+KSH AA++CLNWEE+ Q I D
Sbjct: 61  GRCITSLCWRPDGKAIAVGLDDGTLSLHDVENGKLLRSLKSHCAAIICLNWEEESQLITD 120

Query: 389 GCGSISTYEDRTSRFFXXXXXXXXXXXXXXXDTGFMDDGEDSLRELSNSSHQRFNILCSG 568
             G  S YEDRTSRFF               D GFMDD EDS +ELSNSSHQRFNILCS 
Sbjct: 121 DFGHTSKYEDRTSRFFPPAPRVPRMPGLVSGDNGFMDDSEDSFQELSNSSHQRFNILCSA 180

Query: 569 DKDGIIFFSIFG 604
           DKDG I FSIFG
Sbjct: 181 DKDGNICFSIFG 192


>ref|XP_002304999.1| predicted protein [Populus trichocarpa] gi|222847963|gb|EEE85510.1|
           predicted protein [Populus trichocarpa]
          Length = 476

 Score =  308 bits (788), Expect = 6e-82
 Identities = 150/192 (78%), Positives = 161/192 (83%)
 Frame = +2

Query: 29  METDEAQRVVPFQLQFDKPISSQIKIAEWNPEKDLLAMVTEDSKILLHRFNWQRLWTISP 208
           METDE  RV+PFQLQFDKP++SQ+KIAEWNPEKDLLAMVTEDSKILLHRFNWQRLWTISP
Sbjct: 1   METDETDRVLPFQLQFDKPVASQVKIAEWNPEKDLLAMVTEDSKILLHRFNWQRLWTISP 60

Query: 209 GKCITSLCWRPDGKAIAVGLEDGTISLHDVENGKLLQSMKSHAAAVVCLNWEEDGQEIAD 388
           G+ ITSLCWRPDGKAIAVGLEDGTI LHDVENGKLL+S+KSH  AVVCLNWEE+GQ I D
Sbjct: 61  GRNITSLCWRPDGKAIAVGLEDGTIYLHDVENGKLLRSLKSHTVAVVCLNWEEEGQLIRD 120

Query: 389 GCGSISTYEDRTSRFFXXXXXXXXXXXXXXXDTGFMDDGEDSLRELSNSSHQRFNILCSG 568
              + S+YEDRTSRFF               DTGFMDD EDS RELSNSS+QRFNILCSG
Sbjct: 121 DSKNSSSYEDRTSRFFPPAPRVPRMPGVVSGDTGFMDDSEDSYRELSNSSYQRFNILCSG 180

Query: 569 DKDGIIFFSIFG 604
           DKDG I FSIFG
Sbjct: 181 DKDGSICFSIFG 192


>ref|XP_003608227.1| Anaphase promoting complex subunit [Medicago truncatula]
           gi|355509282|gb|AES90424.1| Anaphase promoting complex
           subunit [Medicago truncatula]
          Length = 835

 Score =  300 bits (769), Expect = 1e-79
 Identities = 142/192 (73%), Positives = 159/192 (82%)
 Frame = +2

Query: 29  METDEAQRVVPFQLQFDKPISSQIKIAEWNPEKDLLAMVTEDSKILLHRFNWQRLWTISP 208
           ME DEA RV+PFQLQFDKP++SQ+KIAEWNPEKDLLAMV++DSKILLHRFNWQRLWTI+P
Sbjct: 1   MEMDEACRVLPFQLQFDKPLASQVKIAEWNPEKDLLAMVSDDSKILLHRFNWQRLWTITP 60

Query: 209 GKCITSLCWRPDGKAIAVGLEDGTISLHDVENGKLLQSMKSHAAAVVCLNWEEDGQEIAD 388
           GKC+TSLCWRPDGKAIAVGL+DGT+SL+DVENGKLL+S+KSH AA++CLNWEED   I D
Sbjct: 61  GKCVTSLCWRPDGKAIAVGLDDGTLSLYDVENGKLLRSLKSHCAAIICLNWEEDSHLITD 120

Query: 389 GCGSISTYEDRTSRFFXXXXXXXXXXXXXXXDTGFMDDGEDSLRELSNSSHQRFNILCSG 568
                S YEDRTSRFF               D GFMDDG+DS  ELSNSSHQRFN+LCSG
Sbjct: 121 DHYHTSKYEDRTSRFFPPAPKIPRMPGLVSGDNGFMDDGDDSFEELSNSSHQRFNVLCSG 180

Query: 569 DKDGIIFFSIFG 604
           DKDG I FSIFG
Sbjct: 181 DKDGNICFSIFG 192


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