BLASTX nr result

ID: Panax21_contig00020703 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00020703
         (398 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003630568.1| Poly(A) polymerase [Medicago truncatula] gi|...   175   4e-42
ref|XP_003524478.1| PREDICTED: CCA-adding enzyme-like [Glycine max]   174   5e-42
ref|XP_002318161.1| predicted protein [Populus trichocarpa] gi|2...   173   1e-41
ref|XP_003532392.1| PREDICTED: CCA-adding enzyme-like [Glycine max]   173   2e-41
ref|XP_002511109.1| poly(A) polymerase, putative [Ricinus commun...   170   1e-40

>ref|XP_003630568.1| Poly(A) polymerase [Medicago truncatula]
           gi|355524590|gb|AET05044.1| Poly(A) polymerase [Medicago
           truncatula]
          Length = 543

 Score =  175 bits (443), Expect = 4e-42
 Identities = 85/131 (64%), Positives = 103/131 (78%)
 Frame = +3

Query: 6   MLDPYSKLVYDYMGGVEDIIKAKVQTVKPSSISYREDCXXXXXXXXXXXXXXFGFTRETA 185
           M DP++K+VYDYMGG+EDIIKAKV+T+ P++ S++EDC              F  + ETA
Sbjct: 221 MFDPFAKIVYDYMGGMEDIIKAKVRTMVPAATSFQEDCARILRAIRIAARLGFSISTETA 280

Query: 186 LNVKNLAYLVLNLNKGRLLMEMNYMLAYGSAESSLRLLWKFGLLDILLPIQAAYFVRHGF 365
            +VK+L+Y +L L+KGRLLMEMNYMLAYGS E+SLRLLWKFGLLDILLP QA YFVRHGF
Sbjct: 281 RSVKHLSYSILRLDKGRLLMEMNYMLAYGSGEASLRLLWKFGLLDILLPFQALYFVRHGF 340

Query: 366 RRCDKMSNMLL 398
           RR DK +NMLL
Sbjct: 341 RRRDKRTNMLL 351


>ref|XP_003524478.1| PREDICTED: CCA-adding enzyme-like [Glycine max]
          Length = 538

 Score =  174 bits (442), Expect = 5e-42
 Identities = 85/132 (64%), Positives = 104/132 (78%)
 Frame = +3

Query: 3   LMLDPYSKLVYDYMGGVEDIIKAKVQTVKPSSISYREDCXXXXXXXXXXXXXXFGFTRET 182
           LM DPY+++VYDYMGG+EDI+KAKV+TV P++ S+REDC              F  +RET
Sbjct: 204 LMFDPYARIVYDYMGGMEDIVKAKVRTVVPAATSFREDCARILRAIRIAARLGFSISRET 263

Query: 183 ALNVKNLAYLVLNLNKGRLLMEMNYMLAYGSAESSLRLLWKFGLLDILLPIQAAYFVRHG 362
           A +VKNL+Y VL L++ RLLME+NYMLAYGS E+SLRLLW+FGLLDILLP QAAYFVR G
Sbjct: 264 AQSVKNLSYSVLRLDRSRLLMEINYMLAYGSGEASLRLLWRFGLLDILLPFQAAYFVRGG 323

Query: 363 FRRCDKMSNMLL 398
           FRR DK +N+LL
Sbjct: 324 FRRRDKRTNLLL 335


>ref|XP_002318161.1| predicted protein [Populus trichocarpa] gi|222858834|gb|EEE96381.1|
           predicted protein [Populus trichocarpa]
          Length = 515

 Score =  173 bits (439), Expect = 1e-41
 Identities = 87/132 (65%), Positives = 104/132 (78%)
 Frame = +3

Query: 3   LMLDPYSKLVYDYMGGVEDIIKAKVQTVKPSSISYREDCXXXXXXXXXXXXXXFGFTRET 182
           LM DPY ++VYDYMGG+EDI KAKV+TV P+ IS++EDC              F FTRET
Sbjct: 196 LMFDPYKRIVYDYMGGLEDIKKAKVRTVIPAGISFQEDCARILRAVRIAARLGFRFTRET 255

Query: 183 ALNVKNLAYLVLNLNKGRLLMEMNYMLAYGSAESSLRLLWKFGLLDILLPIQAAYFVRHG 362
           A  VKNL+ L+L L+K R++MEMNYMLAYGSAE+SLR+LWKFGLL++LLPIQAAYFVR G
Sbjct: 256 AHFVKNLSRLLLRLDKPRIMMEMNYMLAYGSAEASLRILWKFGLLELLLPIQAAYFVRDG 315

Query: 363 FRRCDKMSNMLL 398
           F+R DK SNMLL
Sbjct: 316 FKRRDKRSNMLL 327


>ref|XP_003532392.1| PREDICTED: CCA-adding enzyme-like [Glycine max]
          Length = 527

 Score =  173 bits (438), Expect = 2e-41
 Identities = 86/132 (65%), Positives = 103/132 (78%)
 Frame = +3

Query: 3   LMLDPYSKLVYDYMGGVEDIIKAKVQTVKPSSISYREDCXXXXXXXXXXXXXXFGFTRET 182
           LM DPY+++VYDYMGG+EDIIKAKV+TV P++ S+REDC              F  +RET
Sbjct: 204 LMFDPYARIVYDYMGGMEDIIKAKVRTVVPAATSFREDCARILRAIRVAARLGFSISRET 263

Query: 183 ALNVKNLAYLVLNLNKGRLLMEMNYMLAYGSAESSLRLLWKFGLLDILLPIQAAYFVRHG 362
           A +VKNL+Y VL L+KGRL ME+NYMLAYGS E+SLRLLW+FGLLDILLP QAAYFV  G
Sbjct: 264 AQSVKNLSYSVLRLDKGRLWMEINYMLAYGSGEASLRLLWRFGLLDILLPFQAAYFVCGG 323

Query: 363 FRRCDKMSNMLL 398
           FRR DK +N+LL
Sbjct: 324 FRRRDKRTNLLL 335


>ref|XP_002511109.1| poly(A) polymerase, putative [Ricinus communis]
           gi|223550224|gb|EEF51711.1| poly(A) polymerase, putative
           [Ricinus communis]
          Length = 524

 Score =  170 bits (430), Expect = 1e-40
 Identities = 86/132 (65%), Positives = 103/132 (78%)
 Frame = +3

Query: 3   LMLDPYSKLVYDYMGGVEDIIKAKVQTVKPSSISYREDCXXXXXXXXXXXXXXFGFTRET 182
           LM DPY K+VYDY+GG+EDI KAKV+TV P+S S++EDC              F F+RET
Sbjct: 203 LMFDPYEKIVYDYIGGLEDIRKAKVRTVTPASNSFQEDCARILRAVRIAARLGFRFSRET 262

Query: 183 ALNVKNLAYLVLNLNKGRLLMEMNYMLAYGSAESSLRLLWKFGLLDILLPIQAAYFVRHG 362
           A  +K+ A+ +L L+KGRLLMEMNYMLAYGS+E+SLRLLWKFGLL+ILLPIQAAYFV  G
Sbjct: 263 AHFLKHFAHSILRLDKGRLLMEMNYMLAYGSSEASLRLLWKFGLLEILLPIQAAYFVHCG 322

Query: 363 FRRCDKMSNMLL 398
           F+R DK SNMLL
Sbjct: 323 FKRRDKRSNMLL 334


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