BLASTX nr result

ID: Panax21_contig00020687 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00020687
         (1048 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN63412.1| hypothetical protein VITISV_011051 [Vitis vinifera]    56   5e-23
emb|CAN81957.1| hypothetical protein VITISV_043100 [Vitis vinifera]    54   1e-22
ref|XP_003566650.1| PREDICTED: protein FAR1-RELATED SEQUENCE 5-l...    55   1e-21
emb|CAN64548.1| hypothetical protein VITISV_026047 [Vitis vinifera]    56   2e-21
gb|ABN05718.1| FAR1; Zinc finger, SWIM-type [Medicago truncatula]      99   1e-18

>emb|CAN63412.1| hypothetical protein VITISV_011051 [Vitis vinifera]
          Length = 782

 Score = 56.2 bits (134), Expect(3) = 5e-23
 Identities = 31/97 (31%), Positives = 49/97 (50%), Gaps = 6/97 (6%)
 Frame = +1

Query: 346 QFETLEEVYNFYNYYAREAGFSVRSYSSKKSKDGEVIRKEYVCNKEGSWST---ETSXXX 516
           QF+ ++E   FYN  AR AGFS+R    K+ K+G++I +++VC++EG  +T   E     
Sbjct: 66  QFDRIDEAETFYNMLARVAGFSIRKDDLKRDKNGDIISRKWVCSREGQRATKFIENDKRQ 125

Query: 517 XXXXXXXXESCKARL---VKSKHGGYVVTIFEEGHTH 618
                     C+A     +  K G ++V  F   H H
Sbjct: 126 REPRSLTRVGCEAAFRVGLNRKDGKWIVKEFIGDHNH 162



 Score = 51.2 bits (121), Expect(3) = 5e-23
 Identities = 32/78 (41%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
 Frame = +3

Query: 648 LKSHRRISGVDQLIAQQL-SVNVSTHQQYDILATQAGGIENVGFTQQDMYNS-NRDRRMK 821
           L+SHR IS  D+     L  V V T Q  D +  Q+GG E+VGFTQ+D+YN  +  RR +
Sbjct: 173 LRSHRTISNPDKAQVDXLRKVGVKTTQIMDYMVKQSGGHEHVGFTQKDIYNHVDXMRRSE 232

Query: 822 IKGHDGEMLFDHFLNEQE 875
           IK  D E    +   + E
Sbjct: 233 IKDGDAEAALAYLCGKXE 250



 Score = 47.4 bits (111), Expect(3) = 5e-23
 Identities = 19/48 (39%), Positives = 28/48 (58%)
 Frame = +1

Query: 880  NSGFIFKVETNIEHKITRCFWVDAISRQSYKFYGDAVIFDTTY*TNRY 1023
            +S F +K   + E ++   FW D+ +R  Y  +GD + FDTTY TN Y
Sbjct: 252  DSXFFYKFNIDEESRLANLFWADSTARMDYACFGDVLAFDTTYRTNAY 299


>emb|CAN81957.1| hypothetical protein VITISV_043100 [Vitis vinifera]
          Length = 702

 Score = 53.5 bits (127), Expect(3) = 1e-22
 Identities = 30/97 (30%), Positives = 48/97 (49%), Gaps = 6/97 (6%)
 Frame = +1

Query: 346 QFETLEEVYNFYNYYAREAGFSVRSYSSKKSKDGEVIRKEYVCNKEGSWST---ETSXXX 516
           QF  ++E   FYN  A+  GFS+R    K+ K+G++I +++VC+KEG  +T   E     
Sbjct: 83  QFACIDEAETFYNMLAKLTGFSIRKDDLKRDKNGDIISRKWVCSKEGHRATKFFENDNRQ 142

Query: 517 XXXXXXXXESCKARL---VKSKHGGYVVTIFEEGHTH 618
                     C+A     +  K+G ++V  F   H H
Sbjct: 143 HEPRSLTRVGCEAAFHIGLNRKYGKWIVKEFIGEHNH 179



 Score = 53.5 bits (127), Expect(3) = 1e-22
 Identities = 33/84 (39%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
 Frame = +3

Query: 630 PRRRHLLKSHRRISGVDQLIAQQL-SVNVSTHQQYDILATQAGGIENVGFTQQDMYNS-N 803
           P  R  L+SHR +S  D+     L  V V T Q  D +  Q+GG E+VGFTQ+D+YN  +
Sbjct: 184 PISRQFLRSHRTVSNPDKAQVDVLRQVGVKTTQIIDYMVKQSGGHEHVGFTQKDIYNHVD 243

Query: 804 RDRRMKIKGHDGEMLFDHFLNEQE 875
             RR +IK  D E    +   + E
Sbjct: 244 AMRRSEIKDGDAEAALAYLCGKXE 267



 Score = 46.2 bits (108), Expect(3) = 1e-22
 Identities = 19/48 (39%), Positives = 27/48 (56%)
 Frame = +1

Query: 880  NSGFIFKVETNIEHKITRCFWVDAISRQSYKFYGDAVIFDTTY*TNRY 1023
            +S F +K   + E ++   FW D+  R  Y  +GD + FDTTY TN Y
Sbjct: 269  DSSFFYKFNIDEESRLANLFWADSTXRMDYACFGDVLAFDTTYRTNVY 316


>ref|XP_003566650.1| PREDICTED: protein FAR1-RELATED SEQUENCE 5-like [Brachypodium
           distachyon]
          Length = 686

 Score = 55.1 bits (131), Expect(3) = 1e-21
 Identities = 34/105 (32%), Positives = 55/105 (52%), Gaps = 7/105 (6%)
 Frame = +1

Query: 343 QQFETLEEVYNFYNYYAREAGFSVR-SYSSKKSKDGEVIRKEYVCNKEGSWS---TETSX 510
           + F + ++ + FYN YA E GFSVR SY      + E+I +++VC++EGS      +   
Sbjct: 15  RMFGSEDDGFEFYNSYALEKGFSVRKSYVEWDEANEEIILRKFVCSREGSCEEKHMKRED 74

Query: 511 XXXXXXXXXXESCKARLVKSK---HGGYVVTIFEEGHTHPMTPRE 636
                       C+A+LV ++    G + V  F + HTHP+ PR+
Sbjct: 75  RKRRPRNLTRVGCRAKLVIARVKETGRWFVKDFIDEHTHPLAPRD 119



 Score = 52.8 bits (125), Expect(3) = 1e-21
 Identities = 22/59 (37%), Positives = 37/59 (62%)
 Frame = +1

Query: 871  KKKNSGFIFKVETNIEHKITRCFWVDAISRQSYKFYGDAVIFDTTY*TNRYCMIFAPIM 1047
            ++++  F FK   + E  +   FW D+ SR  Y+ +GD V+FD+TY TN+Y ++F P +
Sbjct: 200  QERDPNFFFKNLVDGEGHLKGLFWADSQSRLDYEVFGDVVVFDSTYRTNKYNLLFVPFV 258



 Score = 42.4 bits (98), Expect(3) = 1e-21
 Identities = 26/80 (32%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
 Frame = +3

Query: 645 LLKSHRRISGVDQLIAQQLSVN-VSTHQQYDILATQAGGIENVGFTQQDMYN-SNRDRRM 818
           LL SHRRIS   +    ++ ++ +  H+  DIL  Q GG + VG T +D+YN  +  ++ 
Sbjct: 123 LLHSHRRISDEQKADIVEMEISGLRKHKIMDILVMQYGGYDEVGCTMRDIYNFCHLYKQE 182

Query: 819 KIKGHDGEMLFDHFLNEQEK 878
            I   D + +  H +  QE+
Sbjct: 183 TIATGDAQTVICHMMARQER 202


>emb|CAN64548.1| hypothetical protein VITISV_026047 [Vitis vinifera]
          Length = 876

 Score = 56.2 bits (134), Expect(3) = 2e-21
 Identities = 31/97 (31%), Positives = 49/97 (50%), Gaps = 6/97 (6%)
 Frame = +1

Query: 346 QFETLEEVYNFYNYYAREAGFSVRSYSSKKSKDGEVIRKEYVCNKEGSWST---ETSXXX 516
           QF+ ++E   FYN  AR AGFS+R    K+ K+G++I +++VC++EG  +T   E     
Sbjct: 55  QFDRIDEAETFYNMLARVAGFSIRKDDLKRDKNGDIISRKWVCSREGQRATKFIENDKRQ 114

Query: 517 XXXXXXXXESCKARL---VKSKHGGYVVTIFEEGHTH 618
                     C+A     +  K G ++V  F   H H
Sbjct: 115 REPRSLTRVGCEAAFRVGLNRKDGKWIVKEFIGDHNH 151



 Score = 48.5 bits (114), Expect(3) = 2e-21
 Identities = 31/78 (39%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
 Frame = +3

Query: 648 LKSHRRISGVDQLIAQQL-SVNVSTHQQYDILATQAGGIENVGFTQQDMYNS-NRDRRMK 821
           L+SHR IS  D+     L  V V T Q  D +  Q+GG E+VGF Q+D+YN  +  RR +
Sbjct: 162 LRSHRTISNPDKAQVDGLRKVGVKTTQIMDYMVKQSGGHEHVGFXQKDIYNHVDAMRRSE 221

Query: 822 IKGHDGEMLFDHFLNEQE 875
           IK  D E    +   + E
Sbjct: 222 IKDGDAEAALAYLCGKAE 239



 Score = 44.7 bits (104), Expect(3) = 2e-21
 Identities = 18/48 (37%), Positives = 27/48 (56%)
 Frame = +1

Query: 880  NSGFIFKVETNIEHKITRCFWVDAISRQSYKFYGDAVIFDTTY*TNRY 1023
            +S F +K   + E ++    W D+ +R  Y  +GD + FDTTY TN Y
Sbjct: 241  DSSFFYKFNIDEESRLANLXWADSTARXDYACFGDVLAFDTTYRTNAY 288


>gb|ABN05718.1| FAR1; Zinc finger, SWIM-type [Medicago truncatula]
          Length = 800

 Score = 99.4 bits (246), Expect = 1e-18
 Identities = 90/273 (32%), Positives = 121/273 (44%), Gaps = 20/273 (7%)
 Frame = +1

Query: 283  NPSVSIFYPQVIGELTPFQGQQFETLEEVYNFYNYYAREAGFSVRSYSSKKSKDGEVIRK 462
            N SV  + P    EL P  G+ F+TL E  +FY  YA  AGFSVR+    K KDG V  K
Sbjct: 77   NTSVE-WIPACEDELKPVIGKVFDTLVEGGDFYKAYAYVAGFSVRNSIKTKDKDG-VKWK 134

Query: 463  EYVCNKEGSWS-----------TETSXXXXXXXXXXXESCKARLV--KSKHGGYVVTIFE 603
             ++C+KEG               E S           E CKARLV  ++  G Y V+ F 
Sbjct: 135  YFLCSKEGFKEEKKVDKPQLLIAENSLSKSRKRKLTREGCKARLVLKRTIDGKYEVSNFY 194

Query: 604  EGHTHPMTPREDATY*SLIVEFLGLINL*HNNYL*MYPHTNNMTF*QPKQEALKMLV--L 777
            EGH+H +       +    +     +   H N L      N  T      + +K  V   
Sbjct: 195  EGHSHGLVSPSKRQF----LRSARNVTSVHKNILFSCNRANVGT--SKSYQIMKEQVGSY 248

Query: 778  LNKICTTPTEIDV*RSKVMMEK---CCLIIS*MSKKK--NSGFIFKVETNIEHKITRCFW 942
             N  CT     +  R+   + K     + I    +K+  N  F +  E + E K+   FW
Sbjct: 249  ENIGCTQRDLQNYSRNLKELIKDSDADMFIDNFRRKREINPSFFYDYEADNEGKLKHVFW 308

Query: 943  VDAISRQSYKFYGDAVIFDTTY*TNRYCMIFAP 1041
             D I R++Y  +GD V FDTTY TN+Y MIFAP
Sbjct: 309  ADGICRKNYSLFGDVVSFDTTYRTNKYFMIFAP 341


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