BLASTX nr result

ID: Panax21_contig00020683 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00020683
         (1792 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28269.3| unnamed protein product [Vitis vinifera]              486   e-135
ref|XP_002272473.1| PREDICTED: transcription factor E2FB-like [V...   486   e-135
emb|CAC17702.1| transcription factor (E2F) [Chenopodium rubrum]       486   e-134
ref|XP_004166944.1| PREDICTED: LOW QUALITY PROTEIN: transcriptio...   485   e-134
ref|XP_004140164.1| PREDICTED: LOW QUALITY PROTEIN: transcriptio...   484   e-134

>emb|CBI28269.3| unnamed protein product [Vitis vinifera]
          Length = 446

 Score =  486 bits (1251), Expect = e-135
 Identities = 252/330 (76%), Positives = 277/330 (83%), Gaps = 6/330 (1%)
 Frame = -3

Query: 974 KPPF----GDYHRFSPGSHRT--QEPEAIVVKTPSLKRKNEGAVFEGENGEQNPNLGFTE 813
           +PPF    GDYHRFS        +  EA+VVK+P LKRK+E   +E E+ E     GFTE
Sbjct: 14  RPPFVPSPGDYHRFSSSGRVPDHEADEAVVVKSPQLKRKSEPD-YEAESSEWTAVPGFTE 72

Query: 812 VVSSPLQTPVSGKGGKAQKIPRIAKFNRTGSPTPASNVGSPSANNLTPAGPCRYDSSLGL 633
           VV+SP+QTPVSGKGGKAQK  RI K +R+G  TP SN GSP  NNLTP GPCRYDSSLGL
Sbjct: 73  VVNSPVQTPVSGKGGKAQKTSRITKCSRSGPQTPVSNAGSPG-NNLTPVGPCRYDSSLGL 131

Query: 632 LTKKFINLIKHAEDGILDLNKAADTLEVQKRRIYDITNVLEGIGLIEKKLKNRIQWKGLD 453
           LTKKFINLIKHAEDGILDLNKAADTLEVQKRRIYDITNVLEGIGLIEKKLKNRIQWKGLD
Sbjct: 132 LTKKFINLIKHAEDGILDLNKAADTLEVQKRRIYDITNVLEGIGLIEKKLKNRIQWKGLD 191

Query: 452 AARPGDVDESVGSLQADVESLSIEERRLDDQIRETQERLRDLSKDENNQRWLFVTEEDIK 273
            +RPG+VDE+V SLQ +VE+LSI+ERRLD QIR+ QERLRDLS+DENNQ+WLFVTEEDIK
Sbjct: 192 VSRPGEVDENVTSLQEEVENLSIQERRLDAQIRDMQERLRDLSEDENNQKWLFVTEEDIK 251

Query: 272 TLPCFQNETLIAIKAPHGTTLEVPDPDEAVDYPQRRYRVVLRSTMGPIDVYLVSQFEEKF 93
            LPCFQ ETLIAIKAPHGTTLEVPDPDEAVDYPQRRYR+VLRS+MGPIDVYLVSQFEEKF
Sbjct: 252 GLPCFQKETLIAIKAPHGTTLEVPDPDEAVDYPQRRYRIVLRSSMGPIDVYLVSQFEEKF 311

Query: 92  EEINGVEAPSSIPSTSALAEYQAAGVATEE 3
           EEING+EAP S PS+S   E   A + TEE
Sbjct: 312 EEINGLEAPPSFPSSSGYNEDPTAAMVTEE 341


>ref|XP_002272473.1| PREDICTED: transcription factor E2FB-like [Vitis vinifera]
          Length = 457

 Score =  486 bits (1251), Expect = e-135
 Identities = 252/330 (76%), Positives = 277/330 (83%), Gaps = 6/330 (1%)
 Frame = -3

Query: 974  KPPF----GDYHRFSPGSHRT--QEPEAIVVKTPSLKRKNEGAVFEGENGEQNPNLGFTE 813
            +PPF    GDYHRFS        +  EA+VVK+P LKRK+E   +E E+ E     GFTE
Sbjct: 25   RPPFVPSPGDYHRFSSSGRVPDHEADEAVVVKSPQLKRKSEPD-YEAESSEWTAVPGFTE 83

Query: 812  VVSSPLQTPVSGKGGKAQKIPRIAKFNRTGSPTPASNVGSPSANNLTPAGPCRYDSSLGL 633
            VV+SP+QTPVSGKGGKAQK  RI K +R+G  TP SN GSP  NNLTP GPCRYDSSLGL
Sbjct: 84   VVNSPVQTPVSGKGGKAQKTSRITKCSRSGPQTPVSNAGSPG-NNLTPVGPCRYDSSLGL 142

Query: 632  LTKKFINLIKHAEDGILDLNKAADTLEVQKRRIYDITNVLEGIGLIEKKLKNRIQWKGLD 453
            LTKKFINLIKHAEDGILDLNKAADTLEVQKRRIYDITNVLEGIGLIEKKLKNRIQWKGLD
Sbjct: 143  LTKKFINLIKHAEDGILDLNKAADTLEVQKRRIYDITNVLEGIGLIEKKLKNRIQWKGLD 202

Query: 452  AARPGDVDESVGSLQADVESLSIEERRLDDQIRETQERLRDLSKDENNQRWLFVTEEDIK 273
             +RPG+VDE+V SLQ +VE+LSI+ERRLD QIR+ QERLRDLS+DENNQ+WLFVTEEDIK
Sbjct: 203  VSRPGEVDENVTSLQEEVENLSIQERRLDAQIRDMQERLRDLSEDENNQKWLFVTEEDIK 262

Query: 272  TLPCFQNETLIAIKAPHGTTLEVPDPDEAVDYPQRRYRVVLRSTMGPIDVYLVSQFEEKF 93
             LPCFQ ETLIAIKAPHGTTLEVPDPDEAVDYPQRRYR+VLRS+MGPIDVYLVSQFEEKF
Sbjct: 263  GLPCFQKETLIAIKAPHGTTLEVPDPDEAVDYPQRRYRIVLRSSMGPIDVYLVSQFEEKF 322

Query: 92   EEINGVEAPSSIPSTSALAEYQAAGVATEE 3
            EEING+EAP S PS+S   E   A + TEE
Sbjct: 323  EEINGLEAPPSFPSSSGYNEDPTAAMVTEE 352


>emb|CAC17702.1| transcription factor (E2F) [Chenopodium rubrum]
          Length = 454

 Score =  486 bits (1250), Expect = e-134
 Identities = 257/344 (74%), Positives = 285/344 (82%), Gaps = 14/344 (4%)
 Frame = -3

Query: 1022 MSTSRAPN-----QPAEQ----ISMKPPF----GDYHRFSPG-SHRTQEPEAIVVKTPSL 885
            MST +A N     QP ++     SMKPPF    GDYHRFS   +    +PE IVVKTP +
Sbjct: 1    MSTPKATNHQSQPQPLKRQLPFTSMKPPFVPSPGDYHRFSDNRAPPAPDPETIVVKTPPM 60

Query: 884  KRKNEGAVFEGENGEQNPNLGFTEVVSSPLQTPVSGKGGKAQKIPRIAKFNRTGSPTPAS 705
            KRK++ A ++ E+ +   + G+TEVVSSP QTPVSGK GK +   RI+K NR G  TP S
Sbjct: 61   KRKSDTAEYDAESSDWTASPGYTEVVSSPHQTPVSGKAGKGRG-SRISKCNRPGPQTPMS 119

Query: 704  NVGSPSANNLTPAGPCRYDSSLGLLTKKFINLIKHAEDGILDLNKAADTLEVQKRRIYDI 525
            NVGSP  NNLTP GPCRYDSSLGL TKKFINLIKHAE+GILDLNKAADTLEVQKRRIYDI
Sbjct: 120  NVGSPG-NNLTPVGPCRYDSSLGLGTKKFINLIKHAEEGILDLNKAADTLEVQKRRIYDI 178

Query: 524  TNVLEGIGLIEKKLKNRIQWKGLDAARPGDVDESVGSLQADVESLSIEERRLDDQIRETQ 345
            TNVLEGIGLIEKKLKNRIQWKGLD +RPG+VD+SV SLQADVE+LSIEERRLD+QIRE Q
Sbjct: 179  TNVLEGIGLIEKKLKNRIQWKGLDVSRPGEVDDSVTSLQADVENLSIEERRLDEQIREMQ 238

Query: 344  ERLRDLSKDENNQRWLFVTEEDIKTLPCFQNETLIAIKAPHGTTLEVPDPDEAVDYPQRR 165
            ERLR++S+DENNQ+WLFVTEEDIK LPCFQNETLIAIKAPHGTTLEVPDPDEAVDYPQRR
Sbjct: 239  ERLREMSEDENNQKWLFVTEEDIKGLPCFQNETLIAIKAPHGTTLEVPDPDEAVDYPQRR 298

Query: 164  YRVVLRSTMGPIDVYLVSQFEEKFEEINGVEAPSSIPSTSALAE 33
            YR+VLRSTMGPIDVYLVSQFEEKFEEI+G E P SIPSTS   E
Sbjct: 299  YRIVLRSTMGPIDVYLVSQFEEKFEEISGAEPPPSIPSTSGYNE 342


>ref|XP_004166944.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor E2FB-like
            [Cucumis sativus]
          Length = 462

 Score =  485 bits (1249), Expect = e-134
 Identities = 255/362 (70%), Positives = 287/362 (79%), Gaps = 4/362 (1%)
 Frame = -3

Query: 1076 PNLKGSISHQNQYNCKFSMSTSRAPNQPAEQISMKPPF---GDYHRFSPGSHRT-QEPEA 909
            PN  G +  Q  ++ K  +  S          SMKPPF   GDYHRF+P S    QEP+A
Sbjct: 7    PNSSGHLPDQIMHSLKRQLPFS----------SMKPPFASSGDYHRFTPDSRLADQEPDA 56

Query: 908  IVVKTPSLKRKNEGAVFEGENGEQNPNLGFTEVVSSPLQTPVSGKGGKAQKIPRIAKFNR 729
            I+VK+P LKRK+E A +E E+ ++     F EVV+ P QTPVS KGGK  K  R+ K++R
Sbjct: 57   ILVKSPQLKRKSEVADYEAESTDRAIGPRFXEVVNRPHQTPVSVKGGKGGK-SRLTKYSR 115

Query: 728  TGSPTPASNVGSPSANNLTPAGPCRYDSSLGLLTKKFINLIKHAEDGILDLNKAADTLEV 549
            +G  TP SNVGSPS NNLTPAGPCRYDSSLGLLTKKFINLIK AEDGILDLNKAADTLEV
Sbjct: 116  SGPQTPISNVGSPSTNNLTPAGPCRYDSSLGLLTKKFINLIKQAEDGILDLNKAADTLEV 175

Query: 548  QKRRIYDITNVLEGIGLIEKKLKNRIQWKGLDAARPGDVDESVGSLQADVESLSIEERRL 369
            QKRRIYDITNVLEGIGLIEKKLKNRIQWKGLD +R GDVD++   LQA+VE+L++EER L
Sbjct: 176  QKRRIYDITNVLEGIGLIEKKLKNRIQWKGLDVSRSGDVDDNYADLQAEVENLTMEERGL 235

Query: 368  DDQIRETQERLRDLSKDENNQRWLFVTEEDIKTLPCFQNETLIAIKAPHGTTLEVPDPDE 189
            D+QIRE QERLRDLS+DENNQRWLFVTEEDIK LPCFQNETLIAIKAPHGTTLEVPDPDE
Sbjct: 236  DEQIREMQERLRDLSEDENNQRWLFVTEEDIKGLPCFQNETLIAIKAPHGTTLEVPDPDE 295

Query: 188  AVDYPQRRYRVVLRSTMGPIDVYLVSQFEEKFEEINGVEAPSSIPSTSALAEYQAAGVAT 9
            AVDYPQRRYR+VLRSTMGPIDVYLVSQFE KFEEIN  E P S+PS+S L E     + T
Sbjct: 296  AVDYPQRRYRIVLRSTMGPIDVYLVSQFEAKFEEINAAEVPPSLPSSSGLNEAPTTTLVT 355

Query: 8    EE 3
            E+
Sbjct: 356  ED 357


>ref|XP_004140164.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor E2FB-like
            [Cucumis sativus]
          Length = 462

 Score =  484 bits (1247), Expect = e-134
 Identities = 255/362 (70%), Positives = 286/362 (79%), Gaps = 4/362 (1%)
 Frame = -3

Query: 1076 PNLKGSISHQNQYNCKFSMSTSRAPNQPAEQISMKPPF---GDYHRFSPGSHRT-QEPEA 909
            PN  G +  Q  ++ K  +  S          SMKPPF   GDYHRF+P S    QEP+A
Sbjct: 7    PNSSGHLPDQIMHSLKRQLPFS----------SMKPPFASSGDYHRFTPDSRLADQEPDA 56

Query: 908  IVVKTPSLKRKNEGAVFEGENGEQNPNLGFTEVVSSPLQTPVSGKGGKAQKIPRIAKFNR 729
            I+VK+P LKRK+E A +E E+ ++     F EVV+SP QTP S KGGK  K  R+ K +R
Sbjct: 57   ILVKSPQLKRKSEVADYEAESTDRAIGPRFXEVVNSPHQTPASVKGGKGSK-SRLTKCSR 115

Query: 728  TGSPTPASNVGSPSANNLTPAGPCRYDSSLGLLTKKFINLIKHAEDGILDLNKAADTLEV 549
            +G  TP SNVGSPS NNLTPAGPCRYDSSLGLLTKKFINLIK AEDGILDLNKAADTLEV
Sbjct: 116  SGPQTPMSNVGSPSTNNLTPAGPCRYDSSLGLLTKKFINLIKQAEDGILDLNKAADTLEV 175

Query: 548  QKRRIYDITNVLEGIGLIEKKLKNRIQWKGLDAARPGDVDESVGSLQADVESLSIEERRL 369
            QKRRIYDITNVLEGIGLIEKKLKNRIQWKGLD +R GDVD++   LQA+VE+L++EER L
Sbjct: 176  QKRRIYDITNVLEGIGLIEKKLKNRIQWKGLDVSRSGDVDDNYADLQAEVENLTMEERGL 235

Query: 368  DDQIRETQERLRDLSKDENNQRWLFVTEEDIKTLPCFQNETLIAIKAPHGTTLEVPDPDE 189
            D+QIRE QERLRDLS+DENNQRWLFVTEEDIK LPCFQNETLIAIKAPHGTTLEVPDPDE
Sbjct: 236  DEQIREMQERLRDLSEDENNQRWLFVTEEDIKGLPCFQNETLIAIKAPHGTTLEVPDPDE 295

Query: 188  AVDYPQRRYRVVLRSTMGPIDVYLVSQFEEKFEEINGVEAPSSIPSTSALAEYQAAGVAT 9
            AVDYPQRRYR+VLRSTMGPIDVYLVSQFE KFEEIN  E P S+PS+S L E     + T
Sbjct: 296  AVDYPQRRYRIVLRSTMGPIDVYLVSQFEAKFEEINAAEVPPSLPSSSGLNEAPTTTLVT 355

Query: 8    EE 3
            E+
Sbjct: 356  ED 357


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