BLASTX nr result

ID: Panax21_contig00020680 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00020680
         (560 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276439.2| PREDICTED: signal recognition particle 54 kD...   337   1e-90
ref|XP_002530328.1| signal recognition particle protein, putativ...   334   5e-90
ref|XP_003554443.1| PREDICTED: signal recognition particle 54 kD...   332   3e-89
ref|XP_003521470.1| PREDICTED: signal recognition particle 54 kD...   332   3e-89
gb|AAC64139.1| signal recognition particle 54 kDa subunit precur...   329   2e-88

>ref|XP_002276439.2| PREDICTED: signal recognition particle 54 kDa protein,
           chloroplastic-like [Vitis vinifera]
           gi|297740127|emb|CBI30309.3| unnamed protein product
           [Vitis vinifera]
          Length = 567

 Score =  337 bits (863), Expect = 1e-90
 Identities = 173/186 (93%), Positives = 183/186 (98%)
 Frame = -1

Query: 560 PAAIDQLVILGEQVDVPVYTMGTEVKPAEIARQGLIEAKKKNVDVVIMDTAGRLQIDKAM 381
           PAAIDQLVILGEQVDVPVYT GTEVKP++IA+QGL EA+KKN+DVVI+DTAGRLQIDKAM
Sbjct: 220 PAAIDQLVILGEQVDVPVYTAGTEVKPSQIAKQGLEEARKKNIDVVIVDTAGRLQIDKAM 279

Query: 380 MDELKEVKRELNPTEVLLVVDAMTGQEAAALVTTFNLEIGITGAILTKLDGDSRGGAALS 201
           MDELK+VKR +NPTEVLLVVDAMTGQEAAALVTTFN+EIGITGAILTKLDGDSRGGAALS
Sbjct: 280 MDELKDVKRAINPTEVLLVVDAMTGQEAAALVTTFNVEIGITGAILTKLDGDSRGGAALS 339

Query: 200 VKEVSGKPIKLVGRGERVEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMRQEDAEELQK 21
           VKEVSGKPIKLVGRGER+EDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMRQEDAEELQK
Sbjct: 340 VKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMRQEDAEELQK 399

Query: 20  KIMSAK 3
           KIMSAK
Sbjct: 400 KIMSAK 405


>ref|XP_002530328.1| signal recognition particle protein, putative [Ricinus communis]
           gi|223530132|gb|EEF32044.1| signal recognition particle
           protein, putative [Ricinus communis]
          Length = 572

 Score =  334 bits (857), Expect = 5e-90
 Identities = 174/186 (93%), Positives = 181/186 (97%)
 Frame = -1

Query: 560 PAAIDQLVILGEQVDVPVYTMGTEVKPAEIARQGLIEAKKKNVDVVIMDTAGRLQIDKAM 381
           PAAIDQLVILGEQV VPVYT GTEVKP+EIA++GL EAKKKN+DVVI+DTAGRLQIDK M
Sbjct: 225 PAAIDQLVILGEQVGVPVYTEGTEVKPSEIAKRGLEEAKKKNIDVVIVDTAGRLQIDKGM 284

Query: 380 MDELKEVKRELNPTEVLLVVDAMTGQEAAALVTTFNLEIGITGAILTKLDGDSRGGAALS 201
           MDELKEVKR LNPTEVLLVVDAMTGQEAAALVTTFNLEIGITGAILTKLDGDSRGGAALS
Sbjct: 285 MDELKEVKRVLNPTEVLLVVDAMTGQEAAALVTTFNLEIGITGAILTKLDGDSRGGAALS 344

Query: 200 VKEVSGKPIKLVGRGERVEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMRQEDAEELQK 21
           VKEVSGKPIKLVGRGER+EDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMRQEDAE+LQK
Sbjct: 345 VKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMRQEDAEDLQK 404

Query: 20  KIMSAK 3
           KIMSAK
Sbjct: 405 KIMSAK 410


>ref|XP_003554443.1| PREDICTED: signal recognition particle 54 kDa protein,
           chloroplastic-like [Glycine max]
          Length = 565

 Score =  332 bits (850), Expect = 3e-89
 Identities = 171/186 (91%), Positives = 180/186 (96%)
 Frame = -1

Query: 560 PAAIDQLVILGEQVDVPVYTMGTEVKPAEIARQGLIEAKKKNVDVVIMDTAGRLQIDKAM 381
           PAAIDQL ILG+QVDVPVYT GT+VKP+EIA+QGL EAKKK +DVVI+DTAGRLQIDK M
Sbjct: 218 PAAIDQLAILGKQVDVPVYTAGTDVKPSEIAKQGLEEAKKKKIDVVIVDTAGRLQIDKTM 277

Query: 380 MDELKEVKRELNPTEVLLVVDAMTGQEAAALVTTFNLEIGITGAILTKLDGDSRGGAALS 201
           MDELKEVK+ LNPTEVLLVVDAMTGQEAAALVTTFNLEIGITGAILTKLDGDSRGGAALS
Sbjct: 278 MDELKEVKKALNPTEVLLVVDAMTGQEAAALVTTFNLEIGITGAILTKLDGDSRGGAALS 337

Query: 200 VKEVSGKPIKLVGRGERVEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMRQEDAEELQK 21
           VKEVSGKPIKLVGRGER+EDLEPFYPDRMAGRILGMGDVLSFVEKAQ+VMRQEDAEELQK
Sbjct: 338 VKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQQVMRQEDAEELQK 397

Query: 20  KIMSAK 3
           KIMSAK
Sbjct: 398 KIMSAK 403


>ref|XP_003521470.1| PREDICTED: signal recognition particle 54 kDa protein,
           chloroplastic-like [Glycine max]
          Length = 565

 Score =  332 bits (850), Expect = 3e-89
 Identities = 171/186 (91%), Positives = 180/186 (96%)
 Frame = -1

Query: 560 PAAIDQLVILGEQVDVPVYTMGTEVKPAEIARQGLIEAKKKNVDVVIMDTAGRLQIDKAM 381
           PAAIDQL ILG+QVDVPVYT GT+VKP+EIA+QGL EAKKK +DVVI+DTAGRLQIDK M
Sbjct: 218 PAAIDQLAILGKQVDVPVYTAGTDVKPSEIAKQGLEEAKKKKIDVVIVDTAGRLQIDKTM 277

Query: 380 MDELKEVKRELNPTEVLLVVDAMTGQEAAALVTTFNLEIGITGAILTKLDGDSRGGAALS 201
           MDELKEVK+ LNPTEVLLVVDAMTGQEAAALVTTFNLEIGITGAILTKLDGDSRGGAALS
Sbjct: 278 MDELKEVKKALNPTEVLLVVDAMTGQEAAALVTTFNLEIGITGAILTKLDGDSRGGAALS 337

Query: 200 VKEVSGKPIKLVGRGERVEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMRQEDAEELQK 21
           VKEVSGKPIKLVGRGER+EDLEPFYPDRMAGRILGMGDVLSFVEKAQ+VMRQEDAEELQK
Sbjct: 338 VKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQQVMRQEDAEELQK 397

Query: 20  KIMSAK 3
           KIMSAK
Sbjct: 398 KIMSAK 403


>gb|AAC64139.1| signal recognition particle 54 kDa subunit precursor [Arabidopsis
           thaliana]
          Length = 564

 Score =  329 bits (843), Expect = 2e-88
 Identities = 171/186 (91%), Positives = 179/186 (96%)
 Frame = -1

Query: 560 PAAIDQLVILGEQVDVPVYTMGTEVKPAEIARQGLIEAKKKNVDVVIMDTAGRLQIDKAM 381
           PAAIDQLVILGEQV VPVYT GT+VKPA+IA+QGL EAKK NVDVVIMDTAGRLQIDK M
Sbjct: 217 PAAIDQLVILGEQVGVPVYTAGTDVKPADIAKQGLKEAKKNNVDVVIMDTAGRLQIDKGM 276

Query: 380 MDELKEVKRELNPTEVLLVVDAMTGQEAAALVTTFNLEIGITGAILTKLDGDSRGGAALS 201
           MDELK+VK+ LNPTEVLLVVDAMTGQEAAALVTTFN+EIGITGAILTKLDGDSRGGAALS
Sbjct: 277 MDELKDVKKFLNPTEVLLVVDAMTGQEAAALVTTFNVEIGITGAILTKLDGDSRGGAALS 336

Query: 200 VKEVSGKPIKLVGRGERVEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMRQEDAEELQK 21
           VKEVSGKPIKLVGRGER+EDLEPFYPDRMAGRILGMGDVLSFVEKA EVMRQEDAE+LQK
Sbjct: 337 VKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKATEVMRQEDAEDLQK 396

Query: 20  KIMSAK 3
           KIMSAK
Sbjct: 397 KIMSAK 402


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