BLASTX nr result

ID: Panax21_contig00020675 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00020675
         (884 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34379.3| unnamed protein product [Vitis vinifera]              390   e-106
ref|XP_002278930.1| PREDICTED: probable polygalacturonase [Vitis...   390   e-106
emb|CBI40426.3| unnamed protein product [Vitis vinifera]              381   e-103
ref|XP_003633958.1| PREDICTED: probable polygalacturonase-like [...   381   e-103
sp|A7PZL3.1|PGLR_VITVI RecName: Full=Probable polygalacturonase;...   379   e-103

>emb|CBI34379.3| unnamed protein product [Vitis vinifera]
          Length = 433

 Score =  390 bits (1003), Expect = e-106
 Identities = 185/239 (77%), Positives = 211/239 (88%)
 Frame = +2

Query: 167 GIWALILVLVVLNPRGVECRHGKRRRIQDTFEYSAISCRAHSASITDFGGVGDGKTLNTK 346
           G+ ++++VLV+L+  G E R   +  + D FEYSAI+CRAHSAS+TDFGGVGDG T NTK
Sbjct: 14  GVVSVVVVLVLLSTNGAESR---KHWVFDYFEYSAINCRAHSASLTDFGGVGDGTTSNTK 70

Query: 347 AFGDAISQLSQYGSDGGAQLFVPPGQWLTGSFNLTSHFTLYLHKDAVLLASQEISEWGVI 526
           AF  AI  LSQ+ SDGG+QLFVPPG+WLTGSFNLTSHFTLYLHKDAVLLASQ+  EW VI
Sbjct: 71  AFQAAIDHLSQFASDGGSQLFVPPGRWLTGSFNLTSHFTLYLHKDAVLLASQDEHEWPVI 130

Query: 527 EPLPSYGHGRDTAGGRYISLIFGTNLTDVVVTGENGTIDGQGALWWQQFHKKKLKYTRPY 706
           +PLPSYG GRDT GGRYISLIFGTNLTDVV+TGENGTIDGQGALWW +FHK +LKYTRPY
Sbjct: 131 DPLPSYGRGRDTQGGRYISLIFGTNLTDVVITGENGTIDGQGALWWAKFHKGELKYTRPY 190

Query: 707 LIEIMHSDNIQISNLTFLNSPSWNVHPVYSSNILIQGITILAPITSPNTDGINPDSCTN 883
           LIEIMHSDN+QIS+LT +NSPSWNVHPVYSSN++IQG+TI AP+TSPNTDGINPDSCTN
Sbjct: 191 LIEIMHSDNVQISSLTLVNSPSWNVHPVYSSNVIIQGLTITAPVTSPNTDGINPDSCTN 249


>ref|XP_002278930.1| PREDICTED: probable polygalacturonase [Vitis vinifera]
          Length = 480

 Score =  390 bits (1003), Expect = e-106
 Identities = 185/239 (77%), Positives = 211/239 (88%)
 Frame = +2

Query: 167 GIWALILVLVVLNPRGVECRHGKRRRIQDTFEYSAISCRAHSASITDFGGVGDGKTLNTK 346
           G+ ++++VLV+L+  G E R   +  + D FEYSAI+CRAHSAS+TDFGGVGDG T NTK
Sbjct: 14  GVVSVVVVLVLLSTNGAESR---KHWVFDYFEYSAINCRAHSASLTDFGGVGDGTTSNTK 70

Query: 347 AFGDAISQLSQYGSDGGAQLFVPPGQWLTGSFNLTSHFTLYLHKDAVLLASQEISEWGVI 526
           AF  AI  LSQ+ SDGG+QLFVPPG+WLTGSFNLTSHFTLYLHKDAVLLASQ+  EW VI
Sbjct: 71  AFQAAIDHLSQFASDGGSQLFVPPGRWLTGSFNLTSHFTLYLHKDAVLLASQDEHEWPVI 130

Query: 527 EPLPSYGHGRDTAGGRYISLIFGTNLTDVVVTGENGTIDGQGALWWQQFHKKKLKYTRPY 706
           +PLPSYG GRDT GGRYISLIFGTNLTDVV+TGENGTIDGQGALWW +FHK +LKYTRPY
Sbjct: 131 DPLPSYGRGRDTQGGRYISLIFGTNLTDVVITGENGTIDGQGALWWAKFHKGELKYTRPY 190

Query: 707 LIEIMHSDNIQISNLTFLNSPSWNVHPVYSSNILIQGITILAPITSPNTDGINPDSCTN 883
           LIEIMHSDN+QIS+LT +NSPSWNVHPVYSSN++IQG+TI AP+TSPNTDGINPDSCTN
Sbjct: 191 LIEIMHSDNVQISSLTLVNSPSWNVHPVYSSNVIIQGLTITAPVTSPNTDGINPDSCTN 249


>emb|CBI40426.3| unnamed protein product [Vitis vinifera]
          Length = 379

 Score =  381 bits (979), Expect = e-103
 Identities = 187/247 (75%), Positives = 214/247 (86%)
 Frame = +2

Query: 143 PSTLQVKKGIWALILVLVVLNPRGVECRHGKRRRIQDTFEYSAISCRAHSASITDFGGVG 322
           P T QV   + A++L+L V   RG ECR G   RI +  EYSAISCRAHSAS+ DFGGVG
Sbjct: 5   PLTTQVVSVLVAVVLLLSV--SRG-ECRKG---RILEALEYSAISCRAHSASLVDFGGVG 58

Query: 323 DGKTLNTKAFGDAISQLSQYGSDGGAQLFVPPGQWLTGSFNLTSHFTLYLHKDAVLLASQ 502
           DG+TLNTKAF DA+S+LS+YGS+GGAQL+VP G+WLTGSF+LTSHFTL+LH+DAVLLASQ
Sbjct: 59  DGQTLNTKAFQDAVSELSKYGSEGGAQLYVPAGKWLTGSFSLTSHFTLFLHRDAVLLASQ 118

Query: 503 EISEWGVIEPLPSYGHGRDTAGGRYISLIFGTNLTDVVVTGENGTIDGQGALWWQQFHKK 682
           +IS+W VI+PLPSYG GRD A GRY SLIFGTNLTDV++TG+NGTIDGQG LWWQ+FH  
Sbjct: 119 DISQWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIITGDNGTIDGQGGLWWQRFHGG 178

Query: 683 KLKYTRPYLIEIMHSDNIQISNLTFLNSPSWNVHPVYSSNILIQGITILAPITSPNTDGI 862
           KLKYTRPYLIE+M+S +IQISNLT LNSPSWNVHPVYS NILIQGITILAP+ SPNTDGI
Sbjct: 179 KLKYTRPYLIELMYSADIQISNLTLLNSPSWNVHPVYSRNILIQGITILAPVRSPNTDGI 238

Query: 863 NPDSCTN 883
           NPDSCTN
Sbjct: 239 NPDSCTN 245


>ref|XP_003633958.1| PREDICTED: probable polygalacturonase-like [Vitis vinifera]
          Length = 479

 Score =  381 bits (979), Expect = e-103
 Identities = 187/247 (75%), Positives = 214/247 (86%)
 Frame = +2

Query: 143 PSTLQVKKGIWALILVLVVLNPRGVECRHGKRRRIQDTFEYSAISCRAHSASITDFGGVG 322
           P T QV   + A++L+L V   RG ECR G   RI +  EYSAISCRAHSAS+ DFGGVG
Sbjct: 7   PLTTQVVSVLVAVVLLLSV--SRG-ECRKG---RILEALEYSAISCRAHSASLVDFGGVG 60

Query: 323 DGKTLNTKAFGDAISQLSQYGSDGGAQLFVPPGQWLTGSFNLTSHFTLYLHKDAVLLASQ 502
           DG+TLNTKAF DA+S+LS+YGS+GGAQL+VP G+WLTGSF+LTSHFTL+LH+DAVLLASQ
Sbjct: 61  DGQTLNTKAFQDAVSELSKYGSEGGAQLYVPAGKWLTGSFSLTSHFTLFLHRDAVLLASQ 120

Query: 503 EISEWGVIEPLPSYGHGRDTAGGRYISLIFGTNLTDVVVTGENGTIDGQGALWWQQFHKK 682
           +IS+W VI+PLPSYG GRD A GRY SLIFGTNLTDV++TG+NGTIDGQG LWWQ+FH  
Sbjct: 121 DISQWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIITGDNGTIDGQGGLWWQRFHGG 180

Query: 683 KLKYTRPYLIEIMHSDNIQISNLTFLNSPSWNVHPVYSSNILIQGITILAPITSPNTDGI 862
           KLKYTRPYLIE+M+S +IQISNLT LNSPSWNVHPVYS NILIQGITILAP+ SPNTDGI
Sbjct: 181 KLKYTRPYLIELMYSADIQISNLTLLNSPSWNVHPVYSRNILIQGITILAPVRSPNTDGI 240

Query: 863 NPDSCTN 883
           NPDSCTN
Sbjct: 241 NPDSCTN 247


>sp|A7PZL3.1|PGLR_VITVI RecName: Full=Probable polygalacturonase; Short=PG; AltName:
           Full=Pectinase
          Length = 491

 Score =  379 bits (973), Expect = e-103
 Identities = 180/235 (76%), Positives = 208/235 (88%)
 Frame = +2

Query: 179 LILVLVVLNPRGVECRHGKRRRIQDTFEYSAISCRAHSASITDFGGVGDGKTLNTKAFGD 358
           L+ V+++L+    ECR G   RI +  EYSAISCRAHSAS+ DFGGVGDG+TLNTKAF D
Sbjct: 28  LVAVVLLLSVSRGECRKG---RILEALEYSAISCRAHSASLVDFGGVGDGQTLNTKAFQD 84

Query: 359 AISQLSQYGSDGGAQLFVPPGQWLTGSFNLTSHFTLYLHKDAVLLASQEISEWGVIEPLP 538
           A+S+LS+YGS+GGAQL+VP G+WLTGSF+LTSHFTL+LH+DAVLLASQ+IS+W VI+PLP
Sbjct: 85  AVSELSKYGSEGGAQLYVPAGKWLTGSFSLTSHFTLFLHRDAVLLASQDISQWPVIKPLP 144

Query: 539 SYGHGRDTAGGRYISLIFGTNLTDVVVTGENGTIDGQGALWWQQFHKKKLKYTRPYLIEI 718
           SYG GRD A GRY SLIFGTNLTDV++TG+NGTIDGQG LWWQ+FH  KLKYTRPYLIE+
Sbjct: 145 SYGRGRDAAAGRYTSLIFGTNLTDVIITGDNGTIDGQGGLWWQRFHGGKLKYTRPYLIEL 204

Query: 719 MHSDNIQISNLTFLNSPSWNVHPVYSSNILIQGITILAPITSPNTDGINPDSCTN 883
           M+S +IQISNLT LNSPSWNVHPVYS NILIQGITILAP+ SPNTDGINPDSCTN
Sbjct: 205 MYSADIQISNLTLLNSPSWNVHPVYSRNILIQGITILAPVRSPNTDGINPDSCTN 259


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