BLASTX nr result

ID: Panax21_contig00020654 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00020654
         (1109 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320566.1| predicted protein [Populus trichocarpa] gi|2...   120   5e-25
ref|XP_002320567.1| predicted protein [Populus trichocarpa] gi|2...   117   5e-24
ref|XP_002884652.1| hypothetical protein ARALYDRAFT_478070 [Arab...   112   1e-22
ref|NP_566310.1| uncharacterized protein [Arabidopsis thaliana] ...   112   1e-22
gb|AAF02155.1|AC009853_15 unknown protein [Arabidopsis thaliana]      112   1e-22

>ref|XP_002320566.1| predicted protein [Populus trichocarpa] gi|222861339|gb|EEE98881.1|
           predicted protein [Populus trichocarpa]
          Length = 183

 Score =  120 bits (302), Expect = 5e-25
 Identities = 76/173 (43%), Positives = 105/173 (60%)
 Frame = -1

Query: 845 EQPKKDNFDVKEVHXXXXXXXXXXXXXLTIAVFVGLSMATPGIRSLDTRDECHAGPGEAK 666
           E P K   D  E++              TIAVFVGLS+A PG RSL+ R EC A P  AK
Sbjct: 7   ETPNK-RLDTTEIYQKALDDLVNVNSLFTIAVFVGLSLAHPGERSLEDRTECDADPDVAK 65

Query: 665 MLIVHEVIAFSCFLLSSIVAKVLKLHLYLDGERYVIVSRDFDLKDFMLILASCASVAGIV 486
            L+V EVI+F+ FLLSS+VAK LK+HL +  ++     +   ++  ML+L++  S+ G V
Sbjct: 66  RLVVFEVISFAFFLLSSLVAKTLKVHLNVYRQKNPRTIKLKIIRGSMLLLSAWGSIFGCV 125

Query: 485 LLALSIVNIIQIRIGLLSCGSKESRLAVMCLGIIVGIALVIYVVSMVIAIFAS 327
            L +S+V++IQI++G LSCGS  +  A   L  IV +AL IYV  M+ AI+ S
Sbjct: 126 FLTMSMVDVIQIKVGKLSCGSVYAFRAAGSLIAIVLLALGIYVPFMMHAIYFS 178


>ref|XP_002320567.1| predicted protein [Populus trichocarpa] gi|222861340|gb|EEE98882.1|
           predicted protein [Populus trichocarpa]
          Length = 157

 Score =  117 bits (293), Expect = 5e-24
 Identities = 71/144 (49%), Positives = 94/144 (65%), Gaps = 1/144 (0%)
 Frame = -1

Query: 761 TIAVFVGLSMATPGIRSLDTRDECHAGPGEAKMLIVHEVIAFSCFLLSSIVAKVLKLHLY 582
           TIAVFVGLS+A+    SL+ R EC AGP  AK L+V EVI+F+CFLLSS++AK LK+ L 
Sbjct: 13  TIAVFVGLSVASRNQYSLENRRECDAGPEVAKRLVVFEVISFACFLLSSLIAKSLKVFLN 72

Query: 581 LDGERYVIVSRDFDLKDFMLILAS-CASVAGIVLLALSIVNIIQIRIGLLSCGSKESRLA 405
           L         R F     +  L+S  AS  GIVLL LS+ +++QI++G LSCGS  S  A
Sbjct: 73  LFRPHKFEGHRFFGWARGVAFLSSVMASTTGIVLLTLSMADVVQIKVGKLSCGSYYSVTA 132

Query: 404 VMCLGIIVGIALVIYVVSMVIAIF 333
           V  L +IV I ++IY+ SM+  I+
Sbjct: 133 VATLSVIVFIGVLIYLPSMLFTIY 156


>ref|XP_002884652.1| hypothetical protein ARALYDRAFT_478070 [Arabidopsis lyrata subsp.
           lyrata] gi|297330492|gb|EFH60911.1| hypothetical protein
           ARALYDRAFT_478070 [Arabidopsis lyrata subsp. lyrata]
          Length = 189

 Score =  112 bits (281), Expect = 1e-22
 Identities = 69/147 (46%), Positives = 95/147 (64%), Gaps = 4/147 (2%)
 Frame = -1

Query: 761 TIAVFVGLSMATPGIRSLDTRDECHAGPGEAKMLIVHEVIAFSCFLLSSIVAKVLKLHLY 582
           TIAVFVGLS+ATPG  SL+ R  C A    AK L+V EV++FS FL SS+VA+ LKL L 
Sbjct: 42  TIAVFVGLSLATPGQHSLEQRSSCDASADVAKKLLVFEVVSFSFFLFSSLVAQGLKLALN 101

Query: 581 LDGERYV--IVSRDFDLK--DFMLILASCASVAGIVLLALSIVNIIQIRIGLLSCGSKES 414
           L   + V  I     ++K   + ++ ++  SV G + L LS+VN+IQIR+GLLSCGSK +
Sbjct: 102 LLNSKDVNEIFRAHINIKVLRWGMMASAVGSVMGCLFLMLSMVNVIQIRLGLLSCGSKSA 161

Query: 413 RLAVMCLGIIVGIALVIYVVSMVIAIF 333
             AV  L  +V  AL+IY+ + + A +
Sbjct: 162 AQAVATLVTLVSSALLIYISTAIYAFW 188


>ref|NP_566310.1| uncharacterized protein [Arabidopsis thaliana]
           gi|145331996|ref|NP_001078120.1| uncharacterized protein
           [Arabidopsis thaliana]
           gi|13877549|gb|AAK43852.1|AF370475_1 Unknown protein
           [Arabidopsis thaliana] gi|20148735|gb|AAM10258.1|
           unknown protein [Arabidopsis thaliana]
           gi|332641030|gb|AEE74551.1| uncharacterized protein
           [Arabidopsis thaliana] gi|332641031|gb|AEE74552.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 189

 Score =  112 bits (281), Expect = 1e-22
 Identities = 69/147 (46%), Positives = 95/147 (64%), Gaps = 4/147 (2%)
 Frame = -1

Query: 761 TIAVFVGLSMATPGIRSLDTRDECHAGPGEAKMLIVHEVIAFSCFLLSSIVAKVLKLHLY 582
           TIAVFVGLS+ATPG  SL+ R  C A    AK L+V EV++FS FL SS+VA+ LKL L 
Sbjct: 42  TIAVFVGLSLATPGQHSLEQRSSCDASADVAKKLLVFEVVSFSFFLFSSLVAQGLKLALN 101

Query: 581 LDGERYV--IVSRDFDLK--DFMLILASCASVAGIVLLALSIVNIIQIRIGLLSCGSKES 414
           L   + V  I     ++K   + ++ ++  SV G + L LS+VN+IQIR+GLLSCGSK +
Sbjct: 102 LLNSKDVNEIFRAHINIKVLRWGMMASAVGSVMGCLFLMLSMVNVIQIRLGLLSCGSKSA 161

Query: 413 RLAVMCLGIIVGIALVIYVVSMVIAIF 333
             AV  L  +V  AL+IY+ + + A +
Sbjct: 162 AQAVATLVTLVSSALLIYISTAIYAFW 188


>gb|AAF02155.1|AC009853_15 unknown protein [Arabidopsis thaliana]
          Length = 180

 Score =  112 bits (281), Expect = 1e-22
 Identities = 69/147 (46%), Positives = 95/147 (64%), Gaps = 4/147 (2%)
 Frame = -1

Query: 761 TIAVFVGLSMATPGIRSLDTRDECHAGPGEAKMLIVHEVIAFSCFLLSSIVAKVLKLHLY 582
           TIAVFVGLS+ATPG  SL+ R  C A    AK L+V EV++FS FL SS+VA+ LKL L 
Sbjct: 33  TIAVFVGLSLATPGQHSLEQRSSCDASADVAKKLLVFEVVSFSFFLFSSLVAQGLKLALN 92

Query: 581 LDGERYV--IVSRDFDLK--DFMLILASCASVAGIVLLALSIVNIIQIRIGLLSCGSKES 414
           L   + V  I     ++K   + ++ ++  SV G + L LS+VN+IQIR+GLLSCGSK +
Sbjct: 93  LLNSKDVNEIFRAHINIKVLRWGMMASAVGSVMGCLFLMLSMVNVIQIRLGLLSCGSKSA 152

Query: 413 RLAVMCLGIIVGIALVIYVVSMVIAIF 333
             AV  L  +V  AL+IY+ + + A +
Sbjct: 153 AQAVATLVTLVSSALLIYISTAIYAFW 179


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