BLASTX nr result

ID: Panax21_contig00020649 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00020649
         (387 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002528672.1| protein binding protein, putative [Ricinus c...    80   1e-13
ref|XP_003523263.1| PREDICTED: E3 ubiquitin-protein ligase RKP-l...    80   2e-13
ref|XP_003602474.1| RING finger and SPRY domain-containing prote...    80   2e-13
gb|AEL98841.1| zinc finger family protein, partial [Silene latif...    77   1e-12
ref|NP_850020.1| ubiquitination-promoting complex protein 1 [Ara...    77   1e-12

>ref|XP_002528672.1| protein binding protein, putative [Ricinus communis]
            gi|223531895|gb|EEF33711.1| protein binding protein,
            putative [Ricinus communis]
          Length = 1348

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 38/48 (79%), Positives = 42/48 (87%)
 Frame = -3

Query: 145  VIFQKLLREACIQDEELLSVFLDRLFNTLSWAMTEFSVSIREIQEKYK 2
            V+FQ LLREACI D EL S FL+RLFNTLSW MTEFSVSIRE+QEKY+
Sbjct: 996  VVFQNLLREACINDGELFSAFLNRLFNTLSWTMTEFSVSIREMQEKYQ 1043


>ref|XP_003523263.1| PREDICTED: E3 ubiquitin-protein ligase RKP-like [Glycine max]
          Length = 1269

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 37/48 (77%), Positives = 43/48 (89%)
 Frame = -3

Query: 145  VIFQKLLREACIQDEELLSVFLDRLFNTLSWAMTEFSVSIREIQEKYK 2
            V+FQ+LLREACI DE L S FL+RLFNTLSW MTEFSVS+RE+QEKY+
Sbjct: 992  VLFQRLLREACISDEGLFSSFLNRLFNTLSWTMTEFSVSVREMQEKYQ 1039


>ref|XP_003602474.1| RING finger and SPRY domain-containing protein [Medicago truncatula]
            gi|355491522|gb|AES72725.1| RING finger and SPRY
            domain-containing protein [Medicago truncatula]
          Length = 1301

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 36/48 (75%), Positives = 44/48 (91%)
 Frame = -3

Query: 145  VIFQKLLREACIQDEELLSVFLDRLFNTLSWAMTEFSVSIREIQEKYK 2
            ++FQ+LL+EACI DE L S FL+RLFNTLSWAMTEFSVS+RE+QEKY+
Sbjct: 1020 ILFQRLLKEACINDEGLFSSFLNRLFNTLSWAMTEFSVSVREMQEKYQ 1067


>gb|AEL98841.1| zinc finger family protein, partial [Silene latifolia]
           gi|343172276|gb|AEL98842.1| zinc finger family protein,
           partial [Silene latifolia]
          Length = 290

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 36/46 (78%), Positives = 40/46 (86%)
 Frame = -3

Query: 145 VIFQKLLREACIQDEELLSVFLDRLFNTLSWAMTEFSVSIREIQEK 8
           V+FQKLLR+AC  DEEL   FL+RLFNTLSW MTEFSVSIRE+QEK
Sbjct: 59  VVFQKLLRDACADDEELFGAFLNRLFNTLSWTMTEFSVSIREMQEK 104


>ref|NP_850020.1| ubiquitination-promoting complex protein 1 [Arabidopsis thaliana]
            gi|300681232|sp|Q9SIZ8.2|RKP_ARATH RecName: Full=E3
            ubiquitin-protein ligase RKP; Short=AtKPC1; AltName:
            Full=Protein RELATED TO KPC1 gi|330252157|gb|AEC07251.1|
            ubiquitination-promoting complex protein 1 [Arabidopsis
            thaliana]
          Length = 1280

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 35/47 (74%), Positives = 42/47 (89%)
 Frame = -3

Query: 142  IFQKLLREACIQDEELLSVFLDRLFNTLSWAMTEFSVSIREIQEKYK 2
            +FQ LLR+ACI D ELLS FL+RLFNTLSW +TEFSVS+RE+QEKY+
Sbjct: 984  VFQALLRDACINDGELLSTFLNRLFNTLSWTITEFSVSVREMQEKYQ 1030


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