BLASTX nr result

ID: Panax21_contig00020641 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00020641
         (527 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276824.2| PREDICTED: FACT complex subunit SPT16-like [...   308   2e-82
emb|CAN64799.1| hypothetical protein VITISV_017318 [Vitis vinifera]   308   3e-82
ref|XP_002319467.1| global transcription factor group [Populus t...   298   4e-79
ref|XP_002512565.1| FACT complex subunit SPT16, putative [Ricinu...   291   3e-77
ref|XP_002533325.1| FACT complex subunit SPT16, putative [Ricinu...   280   1e-73

>ref|XP_002276824.2| PREDICTED: FACT complex subunit SPT16-like [Vitis vinifera]
          Length = 1071

 Score =  308 bits (790), Expect = 2e-82
 Identities = 152/175 (86%), Positives = 166/175 (94%)
 Frame = -1

Query: 527 EKVIIEPTKVKVKLKAENCDICYPPIFQSGGEFDLKPSASSNDQNLYYDSASVILCAIGS 348
           EK I+EP +VKVKLKAEN DICYPPIFQSGGEFDL+PSASSND+NLYYDS SVI+CAIGS
Sbjct: 244 EKAILEPARVKVKLKAENVDICYPPIFQSGGEFDLRPSASSNDENLYYDSTSVIICAIGS 303

Query: 347 RYNSYCSNVARTFLIDANSMQSKAYEVLLRAHEAAISALKPGNKVAAAYQAALSMVEKDA 168
           RYNSYCSNVARTFLIDAN+MQSKAYEVLL+AHEAAI ALKPGNKV+AAYQAAL++VEKDA
Sbjct: 304 RYNSYCSNVARTFLIDANAMQSKAYEVLLKAHEAAIGALKPGNKVSAAYQAALAVVEKDA 363

Query: 167 PELVANLTRSAGTGIGLEFRESGLTLNSKNVRMLKAGMVFNVSLGFQNLQTDTKN 3
           PELV+NLT+SAGTGIGLEFRESGL LN+KN R+LK GMVFNVSLGFQNLQTDT N
Sbjct: 364 PELVSNLTKSAGTGIGLEFRESGLNLNAKNDRVLKPGMVFNVSLGFQNLQTDTNN 418


>emb|CAN64799.1| hypothetical protein VITISV_017318 [Vitis vinifera]
          Length = 1019

 Score =  308 bits (789), Expect = 3e-82
 Identities = 152/175 (86%), Positives = 165/175 (94%)
 Frame = -1

Query: 527 EKVIIEPTKVKVKLKAENCDICYPPIFQSGGEFDLKPSASSNDQNLYYDSASVILCAIGS 348
           EK I+EP +VKVKLKAEN DICYPPIFQSGGEFDL+PSASSND+NLYYDS SVI+CAIGS
Sbjct: 244 EKAILEPARVKVKLKAENVDICYPPIFQSGGEFDLRPSASSNDENLYYDSTSVIICAIGS 303

Query: 347 RYNSYCSNVARTFLIDANSMQSKAYEVLLRAHEAAISALKPGNKVAAAYQAALSMVEKDA 168
           RYNSYCSNVARTFLIDAN+MQSKAYEVLL+AHEAAI ALKPGNKV+AAYQAAL++VEKDA
Sbjct: 304 RYNSYCSNVARTFLIDANAMQSKAYEVLLKAHEAAIGALKPGNKVSAAYQAALAVVEKDA 363

Query: 167 PELVANLTRSAGTGIGLEFRESGLTLNSKNVRMLKAGMVFNVSLGFQNLQTDTKN 3
           PELV NLT+SAGTGIGLEFRESGL LN+KN R+LK GMVFNVSLGFQNLQTDT N
Sbjct: 364 PELVTNLTKSAGTGIGLEFRESGLNLNAKNDRVLKPGMVFNVSLGFQNLQTDTNN 418


>ref|XP_002319467.1| global transcription factor group [Populus trichocarpa]
           gi|222857843|gb|EEE95390.1| global transcription factor
           group [Populus trichocarpa]
          Length = 1053

 Score =  298 bits (762), Expect = 4e-79
 Identities = 144/175 (82%), Positives = 164/175 (93%)
 Frame = -1

Query: 527 EKVIIEPTKVKVKLKAENCDICYPPIFQSGGEFDLKPSASSNDQNLYYDSASVILCAIGS 348
           EK I+EP ++KVKLKAEN DICYPP+FQSGGEFDLKPSA+SND+NLYYDS SVI+CAIGS
Sbjct: 246 EKAILEPARIKVKLKAENVDICYPPVFQSGGEFDLKPSAASNDENLYYDSTSVIICAIGS 305

Query: 347 RYNSYCSNVARTFLIDANSMQSKAYEVLLRAHEAAISALKPGNKVAAAYQAALSMVEKDA 168
           RYNSYCSNVART+LIDAN MQSKAYE+LL+AHEAAISALKPGN V+A YQAALS+VEKDA
Sbjct: 306 RYNSYCSNVARTYLIDANPMQSKAYEILLQAHEAAISALKPGNMVSAVYQAALSVVEKDA 365

Query: 167 PELVANLTRSAGTGIGLEFRESGLTLNSKNVRMLKAGMVFNVSLGFQNLQTDTKN 3
           PEL ANLT++AGTGIGLEFRESGL+LNSKN ++L+ GMVFNVSLGFQ+LQ +TKN
Sbjct: 366 PELTANLTKTAGTGIGLEFRESGLSLNSKNDQVLRQGMVFNVSLGFQHLQAETKN 420


>ref|XP_002512565.1| FACT complex subunit SPT16, putative [Ricinus communis]
           gi|223548526|gb|EEF50017.1| FACT complex subunit SPT16,
           putative [Ricinus communis]
          Length = 1098

 Score =  291 bits (746), Expect = 3e-77
 Identities = 145/173 (83%), Positives = 160/173 (92%)
 Frame = -1

Query: 527 EKVIIEPTKVKVKLKAENCDICYPPIFQSGGEFDLKPSASSNDQNLYYDSASVILCAIGS 348
           EK I+EP ++KVKLKAEN DICYPPIFQSGGEFDLKPSA+SND NLYYDS SVI+CAIGS
Sbjct: 242 EKAILEPARIKVKLKAENIDICYPPIFQSGGEFDLKPSAASNDDNLYYDSTSVIICAIGS 301

Query: 347 RYNSYCSNVARTFLIDANSMQSKAYEVLLRAHEAAISALKPGNKVAAAYQAALSMVEKDA 168
           RYNSYCSNVARTFLIDANSMQSKAYEVLLRA EAAISALK GN+V+A Y AALS+VEKDA
Sbjct: 302 RYNSYCSNVARTFLIDANSMQSKAYEVLLRAQEAAISALKSGNQVSAVYLAALSVVEKDA 361

Query: 167 PELVANLTRSAGTGIGLEFRESGLTLNSKNVRMLKAGMVFNVSLGFQNLQTDT 9
           PEL ANLT++AGTGIGLEFRESGL+L+SKN R+L+ GMVFNVSLGFQNL T+T
Sbjct: 362 PELAANLTKTAGTGIGLEFRESGLSLSSKNNRILRPGMVFNVSLGFQNLHTET 414


>ref|XP_002533325.1| FACT complex subunit SPT16, putative [Ricinus communis]
           gi|223526847|gb|EEF29061.1| FACT complex subunit SPT16,
           putative [Ricinus communis]
          Length = 1050

 Score =  280 bits (715), Expect = 1e-73
 Identities = 135/175 (77%), Positives = 159/175 (90%)
 Frame = -1

Query: 527 EKVIIEPTKVKVKLKAENCDICYPPIFQSGGEFDLKPSASSNDQNLYYDSASVILCAIGS 348
           EK I++P+K KVKL+AENCDICYPPIFQSGG+FDL+PSA+SND+ LYYD ASVI+ AIG+
Sbjct: 229 EKAIMDPSKAKVKLRAENCDICYPPIFQSGGDFDLRPSAASNDELLYYDPASVIIVAIGA 288

Query: 347 RYNSYCSNVARTFLIDANSMQSKAYEVLLRAHEAAISALKPGNKVAAAYQAALSMVEKDA 168
           RYN+YCSNVARTFLIDANSMQSKAYEVLL+AHEAAI ALKPGNK +AAYQAA+++V+ +A
Sbjct: 289 RYNNYCSNVARTFLIDANSMQSKAYEVLLKAHEAAIGALKPGNKFSAAYQAAVTVVKNEA 348

Query: 167 PELVANLTRSAGTGIGLEFRESGLTLNSKNVRMLKAGMVFNVSLGFQNLQTDTKN 3
           PELV ++T+SAGTGIGLEFRES L LN+KN R++K  MVFNVSLGFQNLQ  TKN
Sbjct: 349 PELVPHMTKSAGTGIGLEFRESALNLNAKNDRVIKVNMVFNVSLGFQNLQNQTKN 403


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