BLASTX nr result

ID: Panax21_contig00020633 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00020633
         (1069 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29257.3| unnamed protein product [Vitis vinifera]              430   e-118
emb|CAN72509.1| hypothetical protein VITISV_040729 [Vitis vinifera]   420   e-115
ref|XP_002267714.2| PREDICTED: protein MEI2-like 4-like [Vitis v...   409   e-112
ref|XP_002304641.1| predicted protein [Populus trichocarpa] gi|2...   409   e-112
ref|XP_002512668.1| RNA-binding protein, putative [Ricinus commu...   392   e-107

>emb|CBI29257.3| unnamed protein product [Vitis vinifera]
          Length = 986

 Score =  430 bits (1105), Expect = e-118
 Identities = 227/361 (62%), Positives = 269/361 (74%), Gaps = 7/361 (1%)
 Frame = +3

Query: 6    KADGML-RTAGSNSIASAALASPLEKRMLVDSYTGKWFDIPNIHLTQGQQVNLSLEKHVM 182
            KA+ M  R AG  SIAS    SP+EK +  +S T   ++    +L + Q+VNLS E+H +
Sbjct: 29   KAETMADRNAGGKSIAS----SPMEKLIPTESQTVNCWEQSEPYLIRDQKVNLSSERHAV 84

Query: 183  GAERATSNYMRI--PLDHDSGKISNLNTKRVSYLTEGHNSNVMGHQNENGXXXXXXXXXX 356
            GAER   N + +   ++HD G  SN N    SY  EG   N+ G Q ENG          
Sbjct: 85   GAERVVRNSLDMWRTVEHDLGTRSNANVHSASYFMEGDKINMTGSQYENGLFSSSLSELF 144

Query: 357  XRKMILSSNDALYGHSVGAAASQYEDEEPFESLEEMEAQTIGNLLPNDDDLLFGVTEGLD 536
             RK+ LSSN+ LYGHSV   A  +E+E+ FESLEE+EAQTIGNLLPN+DDLL GV + LD
Sbjct: 145  NRKLRLSSNNGLYGHSVDTVAPHHEEEDLFESLEEIEAQTIGNLLPNEDDLLSGVADVLD 204

Query: 537  YIAKPSSRDDVEDLDFFSSVGGLDLGEDGYSSGQINFD----LSNGQLGGSNVALAGEHP 704
            Y+ +PS+ DD+ED+D FSSVGG+DLG+DG S+GQ N +    +SNGQLGGSN +  GEHP
Sbjct: 205  YVVQPSNGDDLEDIDLFSSVGGMDLGDDGSSAGQRNSEYPGGMSNGQLGGSNGSAVGEHP 264

Query: 705  HGEHPSRTLFVRNINSNVEDSELRALFEQYGDIRTLYTACKHRGFVMISYYDLRAAQNAM 884
            +GEHPSRTLFVRNINSNVEDSELR LFEQYGDIR LYTACKHRGFVMISYYD+RAA+NAM
Sbjct: 265  YGEHPSRTLFVRNINSNVEDSELRILFEQYGDIRALYTACKHRGFVMISYYDIRAARNAM 324

Query: 885  ETLQNKPLRRRKLDIHFSIPKDNLSEKDVNQGTLVVFNIDSAVSNDELRQIFGVYGEIKE 1064
              LQNKPLRRRKLDIH+SIPKDN  EKDVNQGTLVVFN+D +V+NDEL QIFGVYGEIKE
Sbjct: 325  RALQNKPLRRRKLDIHYSIPKDNPPEKDVNQGTLVVFNLDPSVTNDELLQIFGVYGEIKE 384

Query: 1065 I 1067
            I
Sbjct: 385  I 385


>emb|CAN72509.1| hypothetical protein VITISV_040729 [Vitis vinifera]
          Length = 932

 Score =  420 bits (1079), Expect = e-115
 Identities = 215/338 (63%), Positives = 256/338 (75%), Gaps = 6/338 (1%)
 Frame = +3

Query: 72   LEKRMLVDSYTGKWFDIPNIHLTQGQQVNLSLEKHVMGAERATSNYMRI--PLDHDSGKI 245
            +EK +  +S T   ++    +L + Q+VNLS E+H +GAER   N + +   ++HD G  
Sbjct: 1    MEKLIPTESQTVNCWEQSEXYLIRDQKVNLSSERHAVGAERVVRNSLDMWRTVEHDLGTR 60

Query: 246  SNLNTKRVSYLTEGHNSNVMGHQNENGXXXXXXXXXXXRKMILSSNDALYGHSVGAAASQ 425
            SN N    SY  EG   N+ G Q ENG           RK+ LSSN+ LYGHSV   A  
Sbjct: 61   SNANVHSASYFMEGDKINMTGSQYENGLFSSSLSELFNRKLRLSSNNGLYGHSVDTVAPH 120

Query: 426  YEDEEPFESLEEMEAQTIGNLLPNDDDLLFGVTEGLDYIAKPSSRDDVEDLDFFSSVGGL 605
            +E+E+ FESLEE+EAQTIGNLLPN+DDLL GV + LDY+ +PS+ DD+ED+D FSSVGG+
Sbjct: 121  HEEEDLFESLEEIEAQTIGNLLPNEDDLLSGVADVLDYVVQPSNGDDLEDIDLFSSVGGM 180

Query: 606  DLGEDGYSSGQINFD----LSNGQLGGSNVALAGEHPHGEHPSRTLFVRNINSNVEDSEL 773
            DLG+DG S+GQ N +    +SNGQLGGSN +  GEHP+GEHPSRTLFVRNINSNVEDSEL
Sbjct: 181  DLGDDGSSAGQRNSEYPGGMSNGQLGGSNGSAVGEHPYGEHPSRTLFVRNINSNVEDSEL 240

Query: 774  RALFEQYGDIRTLYTACKHRGFVMISYYDLRAAQNAMETLQNKPLRRRKLDIHFSIPKDN 953
            R LFEQYGDIR LYTACKHRGFVMISYYD+RAA+NAM  LQNKPLRRRKLDIH+SIPKDN
Sbjct: 241  RILFEQYGDIRALYTACKHRGFVMISYYDIRAARNAMRALQNKPLRRRKLDIHYSIPKDN 300

Query: 954  LSEKDVNQGTLVVFNIDSAVSNDELRQIFGVYGEIKEI 1067
              EKDVNQGTLVVFN+D +V+NDEL QIFGVYGEIKEI
Sbjct: 301  PPEKDVNQGTLVVFNLDPSVTNDELLQIFGVYGEIKEI 338


>ref|XP_002267714.2| PREDICTED: protein MEI2-like 4-like [Vitis vinifera]
          Length = 965

 Score =  409 bits (1052), Expect = e-112
 Identities = 220/359 (61%), Positives = 260/359 (72%), Gaps = 5/359 (1%)
 Frame = +3

Query: 6    KADGML-RTAGSNSIASAALASPLEKRMLVDSYTGKWFDIPNIHLTQGQQVNLSLEKHVM 182
            KA+ M  R AG  SIAS    SP+EK +  +S T   ++    +L + Q+VNLS E+H +
Sbjct: 33   KAETMADRNAGGKSIAS----SPMEKLIPTESQTVNCWEQSEPYLIRDQKVNLSSERHAV 88

Query: 183  GAERATSNYMRIPLDHDSGKISNLNTKRVSYLTEGHNSNVMGHQNENGXXXXXXXXXXXR 362
            GAER+ S +M                       EG   N+ G Q ENG           R
Sbjct: 89   GAERSASYFM-----------------------EGDKINMTGSQYENGLFSSSLSELFNR 125

Query: 363  KMILSSNDALYGHSVGAAASQYEDEEPFESLEEMEAQTIGNLLPNDDDLLFGVTEGLDYI 542
            K+ LSSN+ LYGHSV   A  +E+E+ FESLEE+EAQTIGNLLPN+DDLL GV + LDY+
Sbjct: 126  KLRLSSNNGLYGHSVDTVAPHHEEEDLFESLEEIEAQTIGNLLPNEDDLLSGVADVLDYV 185

Query: 543  AKPSSRDDVEDLDFFSSVGGLDLGEDGYSSGQINFD----LSNGQLGGSNVALAGEHPHG 710
             +PS+ DD+ED+D FSSVGG+DLG+DG S+GQ N +    +SNGQLGGSN +  GEHP+G
Sbjct: 186  VQPSNGDDLEDIDLFSSVGGMDLGDDGSSAGQRNSEYPGGMSNGQLGGSNGSAVGEHPYG 245

Query: 711  EHPSRTLFVRNINSNVEDSELRALFEQYGDIRTLYTACKHRGFVMISYYDLRAAQNAMET 890
            EHPSRTLFVRNINSNVEDSELR LFEQYGDIR LYTACKHRGFVMISYYD+RAA+NAM  
Sbjct: 246  EHPSRTLFVRNINSNVEDSELRILFEQYGDIRALYTACKHRGFVMISYYDIRAARNAMRA 305

Query: 891  LQNKPLRRRKLDIHFSIPKDNLSEKDVNQGTLVVFNIDSAVSNDELRQIFGVYGEIKEI 1067
            LQNKPLRRRKLDIH+SIPKDN  EKDVNQGTLVVFN+D +V+NDEL QIFGVYGEIKEI
Sbjct: 306  LQNKPLRRRKLDIHYSIPKDNPPEKDVNQGTLVVFNLDPSVTNDELLQIFGVYGEIKEI 364


>ref|XP_002304641.1| predicted protein [Populus trichocarpa] gi|222842073|gb|EEE79620.1|
            predicted protein [Populus trichocarpa]
          Length = 976

 Score =  409 bits (1050), Expect = e-112
 Identities = 213/349 (61%), Positives = 264/349 (75%), Gaps = 6/349 (1%)
 Frame = +3

Query: 39   NSIASAALASPLEKRMLVDSYTGKWFDIPNIHLTQGQQVNLSLEKHVMGAERATSNYMRI 218
            +++  + + SP EK + V+S      + P   L   Q++N SL+KH +GAERA +    +
Sbjct: 47   DTLGKSYVLSPSEKLVAVESVQS--LEHPQPSLMHDQKMNHSLDKHAVGAERALNRSFTL 104

Query: 219  --PLDHDSGKISNLNTKRVSYLTEGHNSNVMGHQNENGXXXXXXXXXXXRKMILSSNDAL 392
              P+D+D+G  ++LN +  SY  E    N M  Q+EN            RK+ LSS ++L
Sbjct: 105  LRPVDNDTGTGTSLNVQPTSYFAEVGKVNAMATQHENSLFSSSLSELFSRKLRLSSTNSL 164

Query: 393  YGHSVGAAASQYEDEEPFESLEEMEAQTIGNLLPNDDDLLFGVTEGLDYIAKPSSRDDVE 572
            YGHSV   AS +E+EEPF+SLEE+EAQTIGNLLPNDDDL  GVT+ ++ I  PS  DD+E
Sbjct: 165  YGHSVDTIASHFEEEEPFQSLEEIEAQTIGNLLPNDDDLFSGVTDRVENINHPSGGDDME 224

Query: 573  DLDFFSSVGGLDLGEDGYSSGQINFDL----SNGQLGGSNVALAGEHPHGEHPSRTLFVR 740
            DLDFFSSVGG+DLG+DG S  QI+ +     SNGQLG  N+++AGEHP+GEHPSRTLFVR
Sbjct: 225  DLDFFSSVGGMDLGDDG-SVAQIDSEFHGGASNGQLGACNLSVAGEHPYGEHPSRTLFVR 283

Query: 741  NINSNVEDSELRALFEQYGDIRTLYTACKHRGFVMISYYDLRAAQNAMETLQNKPLRRRK 920
            NINSNVE+SELRA+FEQYGDIRTLYTACKHRGFVMISYYD+RAA+NAM+ LQN+PLR RK
Sbjct: 284  NINSNVEESELRAIFEQYGDIRTLYTACKHRGFVMISYYDIRAAKNAMKALQNRPLRCRK 343

Query: 921  LDIHFSIPKDNLSEKDVNQGTLVVFNIDSAVSNDELRQIFGVYGEIKEI 1067
            LDIH+SIPKDN SEKD NQGTL VFN+DS+VSND+LR+IFGVYGEIKEI
Sbjct: 344  LDIHYSIPKDNPSEKDFNQGTLAVFNLDSSVSNDDLRRIFGVYGEIKEI 392


>ref|XP_002512668.1| RNA-binding protein, putative [Ricinus communis]
            gi|223548629|gb|EEF50120.1| RNA-binding protein, putative
            [Ricinus communis]
          Length = 443

 Score =  392 bits (1007), Expect = e-107
 Identities = 207/342 (60%), Positives = 254/342 (74%), Gaps = 8/342 (2%)
 Frame = +3

Query: 66   SPLEKRMLVDSYTGKWFDIPNIHLTQGQQVNLSLEKHVMGAERATSNYMRI--PLDHDSG 239
            S LE    V+  + K F++    L + Q++N SL++H +G+ERA   +  +  P+  D G
Sbjct: 2    SSLENLGAVERQSAKSFELHQSLLMRDQKLNHSLDRHAVGSERAARQFSTLLRPVIQDPG 61

Query: 240  KISNLNTKRVSYLTEGHNSNVMGHQNENGXXXXXXXXXXXRKMILSSNDALYGHSVGAAA 419
              S+LN +  +Y  EG   ++M +Q EN            RK+ LSSN+ LYGHSV   A
Sbjct: 62   TRSSLNVQPSTYYPEGGKVDIMANQYENSLFSSSLSELFSRKLRLSSNNVLYGHSVDTVA 121

Query: 420  SQYEDEEPFESLEEMEAQTIGNLLPNDDDLLFGVTEGLDYIAKPSSRDDVEDLDFFSSVG 599
            S +E++EPFESLEE+EAQTIGNLLP+DDDL  G+T+ LD   + + RDDVE+LDFFSSVG
Sbjct: 122  SHFEEQEPFESLEEVEAQTIGNLLPSDDDLFSGMTDKLDNTIQSNGRDDVEELDFFSSVG 181

Query: 600  GLDLGEDGYSSGQINFD----LSNGQ--LGGSNVALAGEHPHGEHPSRTLFVRNINSNVE 761
            GLDLG+DG S+ Q + D    +SNGQ   G SN ++AGEHP+GE PSRTLFVRNINSNVE
Sbjct: 182  GLDLGDDG-STPQNDTDFAGGISNGQPGTGSSNGSIAGEHPYGEQPSRTLFVRNINSNVE 240

Query: 762  DSELRALFEQYGDIRTLYTACKHRGFVMISYYDLRAAQNAMETLQNKPLRRRKLDIHFSI 941
            DSELRALFEQYGDIR+LYT CKHRGFVMISYYD+RAA NA E LQ+ PLRRRKLDIHFSI
Sbjct: 241  DSELRALFEQYGDIRSLYTTCKHRGFVMISYYDIRAANNAKEALQDTPLRRRKLDIHFSI 300

Query: 942  PKDNLSEKDVNQGTLVVFNIDSAVSNDELRQIFGVYGEIKEI 1067
            PKDN SEKD NQGTLV FN+D+++SNDEL QIFGV+GEIKEI
Sbjct: 301  PKDNPSEKDTNQGTLVAFNLDASISNDELHQIFGVHGEIKEI 342


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