BLASTX nr result
ID: Panax21_contig00020632
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00020632 (747 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002275546.2| PREDICTED: pentatricopeptide repeat-containi... 355 7e-96 emb|CBI27235.3| unnamed protein product [Vitis vinifera] 355 7e-96 ref|XP_002878152.1| hypothetical protein ARALYDRAFT_486188 [Arab... 333 3e-89 ref|XP_002299387.1| predicted protein [Populus trichocarpa] gi|2... 330 2e-88 ref|NP_191302.2| pentatricopeptide repeat-containing protein [Ar... 325 6e-87 >ref|XP_002275546.2| PREDICTED: pentatricopeptide repeat-containing protein At3g57430, chloroplastic-like [Vitis vinifera] Length = 896 Score = 355 bits (910), Expect = 7e-96 Identities = 168/217 (77%), Positives = 178/217 (82%) Frame = +3 Query: 3 YKLVNAMPPNYDKAGAWSSLLGACRIHQNVELGEIAANNLLELEPDVASHYVLLSNIYSS 182 Y+LVN MP +DK GAWSSLLGACRIHQNVELGE+AA NLL LEP+VASHYVLLSNIYSS Sbjct: 680 YELVNTMPAEFDKVGAWSSLLGACRIHQNVELGEVAAKNLLHLEPNVASHYVLLSNIYSS 739 Query: 183 AGLWEKAMEVRKNMMKMGVRKEPGCSWIEFGDEVHKFTAGDASHPQSEQLHGXXXXXXXX 362 AGLW KAMEVRKNM +MGV+KEPGCSWIEF DEVHKF AGD SHPQSEQLHG Sbjct: 740 AGLWNKAMEVRKNMRQMGVKKEPGCSWIEFRDEVHKFMAGDVSHPQSEQLHGFLETLSEK 799 Query: 363 XXXXGYVPDTSCVLHNVNEDEKENLLCGHSERLAIAFGILNSPPGTTIRVAKNLRVCNDC 542 GYVPDTSCVLHNV+EDEKENLLCGHSE+LAIAFGILN+PPGTTIRVAKNLRVCNDC Sbjct: 800 MRKEGYVPDTSCVLHNVDEDEKENLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDC 859 Query: 543 HAATKIISKXXXXXXXXXXXXXFHHFRNGICSCGDYW 653 HAATK ISK FHHF+ G CSCGDYW Sbjct: 860 HAATKFISKIMEREIIVRDVRRFHHFKEGTCSCGDYW 896 >emb|CBI27235.3| unnamed protein product [Vitis vinifera] Length = 696 Score = 355 bits (910), Expect = 7e-96 Identities = 168/217 (77%), Positives = 178/217 (82%) Frame = +3 Query: 3 YKLVNAMPPNYDKAGAWSSLLGACRIHQNVELGEIAANNLLELEPDVASHYVLLSNIYSS 182 Y+LVN MP +DK GAWSSLLGACRIHQNVELGE+AA NLL LEP+VASHYVLLSNIYSS Sbjct: 480 YELVNTMPAEFDKVGAWSSLLGACRIHQNVELGEVAAKNLLHLEPNVASHYVLLSNIYSS 539 Query: 183 AGLWEKAMEVRKNMMKMGVRKEPGCSWIEFGDEVHKFTAGDASHPQSEQLHGXXXXXXXX 362 AGLW KAMEVRKNM +MGV+KEPGCSWIEF DEVHKF AGD SHPQSEQLHG Sbjct: 540 AGLWNKAMEVRKNMRQMGVKKEPGCSWIEFRDEVHKFMAGDVSHPQSEQLHGFLETLSEK 599 Query: 363 XXXXGYVPDTSCVLHNVNEDEKENLLCGHSERLAIAFGILNSPPGTTIRVAKNLRVCNDC 542 GYVPDTSCVLHNV+EDEKENLLCGHSE+LAIAFGILN+PPGTTIRVAKNLRVCNDC Sbjct: 600 MRKEGYVPDTSCVLHNVDEDEKENLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDC 659 Query: 543 HAATKIISKXXXXXXXXXXXXXFHHFRNGICSCGDYW 653 HAATK ISK FHHF+ G CSCGDYW Sbjct: 660 HAATKFISKIMEREIIVRDVRRFHHFKEGTCSCGDYW 696 >ref|XP_002878152.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp. lyrata] gi|297323990|gb|EFH54411.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp. lyrata] Length = 886 Score = 333 bits (853), Expect = 3e-89 Identities = 156/217 (71%), Positives = 173/217 (79%) Frame = +3 Query: 3 YKLVNAMPPNYDKAGAWSSLLGACRIHQNVELGEIAANNLLELEPDVASHYVLLSNIYSS 182 Y+L+N +P N+DKAGAWSSLLGACRIH N+E+GEIAA NL++LEP+VASHYVLL+NIYSS Sbjct: 670 YQLINLIPRNFDKAGAWSSLLGACRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSS 729 Query: 183 AGLWEKAMEVRKNMMKMGVRKEPGCSWIEFGDEVHKFTAGDASHPQSEQLHGXXXXXXXX 362 AGLW KA EVR+NM GVRKEPGCSWIE GDEVHKF AGD+SHPQSE+L G Sbjct: 730 AGLWYKATEVRRNMKAQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLRGYLETLWER 789 Query: 363 XXXXGYVPDTSCVLHNVNEDEKENLLCGHSERLAIAFGILNSPPGTTIRVAKNLRVCNDC 542 GY+PDTSCVLHNV EDEKE LLCGHSE+LAIAFGILN+ PGT IRVAKNLRVCNDC Sbjct: 790 MRKEGYIPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDC 849 Query: 543 HAATKIISKXXXXXXXXXXXXXFHHFRNGICSCGDYW 653 H ATK ISK FHHF+NG CSCGDYW Sbjct: 850 HLATKFISKVVDREIILRDVRRFHHFKNGTCSCGDYW 886 >ref|XP_002299387.1| predicted protein [Populus trichocarpa] gi|222846645|gb|EEE84192.1| predicted protein [Populus trichocarpa] Length = 814 Score = 330 bits (846), Expect = 2e-88 Identities = 151/217 (69%), Positives = 174/217 (80%) Frame = +3 Query: 3 YKLVNAMPPNYDKAGAWSSLLGACRIHQNVELGEIAANNLLELEPDVASHYVLLSNIYSS 182 Y LVN MP +DK GAWSSLLGACRI+ N+E+GEIAA NLL+L+PDVASHYVLLSNIYSS Sbjct: 598 YGLVNTMPSGFDKVGAWSSLLGACRIYHNIEIGEIAAENLLQLQPDVASHYVLLSNIYSS 657 Query: 183 AGLWEKAMEVRKNMMKMGVRKEPGCSWIEFGDEVHKFTAGDASHPQSEQLHGXXXXXXXX 362 AGLW+KAM +R+ M MGV+KEPGCSWIE+GDEVHKF AGD SHPQSE+LH Sbjct: 658 AGLWDKAMNLRRRMKAMGVKKEPGCSWIEYGDEVHKFLAGDLSHPQSEKLHDFLETLSER 717 Query: 363 XXXXGYVPDTSCVLHNVNEDEKENLLCGHSERLAIAFGILNSPPGTTIRVAKNLRVCNDC 542 GYVPDT+CVLH+++E+EKE +LCGHSE+LAIAFGILN+PPGTTIRVAKNLRVCNDC Sbjct: 718 LKKEGYVPDTACVLHDIDEEEKETILCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDC 777 Query: 543 HAATKIISKXXXXXXXXXXXXXFHHFRNGICSCGDYW 653 H A+K ISK FHHF++G CSCGDYW Sbjct: 778 HTASKFISKIEDREIILRDARRFHHFKDGTCSCGDYW 814 >ref|NP_191302.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] gi|218525905|sp|Q7Y211.2|PP285_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g57430, chloroplastic; Flags: Precursor gi|332646133|gb|AEE79654.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] Length = 890 Score = 325 bits (833), Expect = 6e-87 Identities = 154/217 (70%), Positives = 173/217 (79%) Frame = +3 Query: 3 YKLVNAMPPNYDKAGAWSSLLGACRIHQNVELGEIAANNLLELEPDVASHYVLLSNIYSS 182 Y+L+N MP +++KAGAWSSLLGA RIH N+E+GEIAA NL++LEP+VASHYVLL+NIYSS Sbjct: 674 YQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSS 733 Query: 183 AGLWEKAMEVRKNMMKMGVRKEPGCSWIEFGDEVHKFTAGDASHPQSEQLHGXXXXXXXX 362 AGLW+KA EVR+NM + GVRKEPGCSWIE GDEVHKF AGD+SHPQSE+L G Sbjct: 734 AGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWER 793 Query: 363 XXXXGYVPDTSCVLHNVNEDEKENLLCGHSERLAIAFGILNSPPGTTIRVAKNLRVCNDC 542 GYVPDTSCVLHNV EDEKE LLCGHSE+LAIAFGILN+ PGT IRVAKNLRVCNDC Sbjct: 794 MRKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDC 853 Query: 543 HAATKIISKXXXXXXXXXXXXXFHHFRNGICSCGDYW 653 H ATK ISK FH F+NG CSCGDYW Sbjct: 854 HLATKFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 890