BLASTX nr result

ID: Panax21_contig00020632 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00020632
         (747 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275546.2| PREDICTED: pentatricopeptide repeat-containi...   355   7e-96
emb|CBI27235.3| unnamed protein product [Vitis vinifera]              355   7e-96
ref|XP_002878152.1| hypothetical protein ARALYDRAFT_486188 [Arab...   333   3e-89
ref|XP_002299387.1| predicted protein [Populus trichocarpa] gi|2...   330   2e-88
ref|NP_191302.2| pentatricopeptide repeat-containing protein [Ar...   325   6e-87

>ref|XP_002275546.2| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
            chloroplastic-like [Vitis vinifera]
          Length = 896

 Score =  355 bits (910), Expect = 7e-96
 Identities = 168/217 (77%), Positives = 178/217 (82%)
 Frame = +3

Query: 3    YKLVNAMPPNYDKAGAWSSLLGACRIHQNVELGEIAANNLLELEPDVASHYVLLSNIYSS 182
            Y+LVN MP  +DK GAWSSLLGACRIHQNVELGE+AA NLL LEP+VASHYVLLSNIYSS
Sbjct: 680  YELVNTMPAEFDKVGAWSSLLGACRIHQNVELGEVAAKNLLHLEPNVASHYVLLSNIYSS 739

Query: 183  AGLWEKAMEVRKNMMKMGVRKEPGCSWIEFGDEVHKFTAGDASHPQSEQLHGXXXXXXXX 362
            AGLW KAMEVRKNM +MGV+KEPGCSWIEF DEVHKF AGD SHPQSEQLHG        
Sbjct: 740  AGLWNKAMEVRKNMRQMGVKKEPGCSWIEFRDEVHKFMAGDVSHPQSEQLHGFLETLSEK 799

Query: 363  XXXXGYVPDTSCVLHNVNEDEKENLLCGHSERLAIAFGILNSPPGTTIRVAKNLRVCNDC 542
                GYVPDTSCVLHNV+EDEKENLLCGHSE+LAIAFGILN+PPGTTIRVAKNLRVCNDC
Sbjct: 800  MRKEGYVPDTSCVLHNVDEDEKENLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDC 859

Query: 543  HAATKIISKXXXXXXXXXXXXXFHHFRNGICSCGDYW 653
            HAATK ISK             FHHF+ G CSCGDYW
Sbjct: 860  HAATKFISKIMEREIIVRDVRRFHHFKEGTCSCGDYW 896


>emb|CBI27235.3| unnamed protein product [Vitis vinifera]
          Length = 696

 Score =  355 bits (910), Expect = 7e-96
 Identities = 168/217 (77%), Positives = 178/217 (82%)
 Frame = +3

Query: 3    YKLVNAMPPNYDKAGAWSSLLGACRIHQNVELGEIAANNLLELEPDVASHYVLLSNIYSS 182
            Y+LVN MP  +DK GAWSSLLGACRIHQNVELGE+AA NLL LEP+VASHYVLLSNIYSS
Sbjct: 480  YELVNTMPAEFDKVGAWSSLLGACRIHQNVELGEVAAKNLLHLEPNVASHYVLLSNIYSS 539

Query: 183  AGLWEKAMEVRKNMMKMGVRKEPGCSWIEFGDEVHKFTAGDASHPQSEQLHGXXXXXXXX 362
            AGLW KAMEVRKNM +MGV+KEPGCSWIEF DEVHKF AGD SHPQSEQLHG        
Sbjct: 540  AGLWNKAMEVRKNMRQMGVKKEPGCSWIEFRDEVHKFMAGDVSHPQSEQLHGFLETLSEK 599

Query: 363  XXXXGYVPDTSCVLHNVNEDEKENLLCGHSERLAIAFGILNSPPGTTIRVAKNLRVCNDC 542
                GYVPDTSCVLHNV+EDEKENLLCGHSE+LAIAFGILN+PPGTTIRVAKNLRVCNDC
Sbjct: 600  MRKEGYVPDTSCVLHNVDEDEKENLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDC 659

Query: 543  HAATKIISKXXXXXXXXXXXXXFHHFRNGICSCGDYW 653
            HAATK ISK             FHHF+ G CSCGDYW
Sbjct: 660  HAATKFISKIMEREIIVRDVRRFHHFKEGTCSCGDYW 696


>ref|XP_002878152.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
            lyrata] gi|297323990|gb|EFH54411.1| hypothetical protein
            ARALYDRAFT_486188 [Arabidopsis lyrata subsp. lyrata]
          Length = 886

 Score =  333 bits (853), Expect = 3e-89
 Identities = 156/217 (71%), Positives = 173/217 (79%)
 Frame = +3

Query: 3    YKLVNAMPPNYDKAGAWSSLLGACRIHQNVELGEIAANNLLELEPDVASHYVLLSNIYSS 182
            Y+L+N +P N+DKAGAWSSLLGACRIH N+E+GEIAA NL++LEP+VASHYVLL+NIYSS
Sbjct: 670  YQLINLIPRNFDKAGAWSSLLGACRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSS 729

Query: 183  AGLWEKAMEVRKNMMKMGVRKEPGCSWIEFGDEVHKFTAGDASHPQSEQLHGXXXXXXXX 362
            AGLW KA EVR+NM   GVRKEPGCSWIE GDEVHKF AGD+SHPQSE+L G        
Sbjct: 730  AGLWYKATEVRRNMKAQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLRGYLETLWER 789

Query: 363  XXXXGYVPDTSCVLHNVNEDEKENLLCGHSERLAIAFGILNSPPGTTIRVAKNLRVCNDC 542
                GY+PDTSCVLHNV EDEKE LLCGHSE+LAIAFGILN+ PGT IRVAKNLRVCNDC
Sbjct: 790  MRKEGYIPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDC 849

Query: 543  HAATKIISKXXXXXXXXXXXXXFHHFRNGICSCGDYW 653
            H ATK ISK             FHHF+NG CSCGDYW
Sbjct: 850  HLATKFISKVVDREIILRDVRRFHHFKNGTCSCGDYW 886


>ref|XP_002299387.1| predicted protein [Populus trichocarpa] gi|222846645|gb|EEE84192.1|
            predicted protein [Populus trichocarpa]
          Length = 814

 Score =  330 bits (846), Expect = 2e-88
 Identities = 151/217 (69%), Positives = 174/217 (80%)
 Frame = +3

Query: 3    YKLVNAMPPNYDKAGAWSSLLGACRIHQNVELGEIAANNLLELEPDVASHYVLLSNIYSS 182
            Y LVN MP  +DK GAWSSLLGACRI+ N+E+GEIAA NLL+L+PDVASHYVLLSNIYSS
Sbjct: 598  YGLVNTMPSGFDKVGAWSSLLGACRIYHNIEIGEIAAENLLQLQPDVASHYVLLSNIYSS 657

Query: 183  AGLWEKAMEVRKNMMKMGVRKEPGCSWIEFGDEVHKFTAGDASHPQSEQLHGXXXXXXXX 362
            AGLW+KAM +R+ M  MGV+KEPGCSWIE+GDEVHKF AGD SHPQSE+LH         
Sbjct: 658  AGLWDKAMNLRRRMKAMGVKKEPGCSWIEYGDEVHKFLAGDLSHPQSEKLHDFLETLSER 717

Query: 363  XXXXGYVPDTSCVLHNVNEDEKENLLCGHSERLAIAFGILNSPPGTTIRVAKNLRVCNDC 542
                GYVPDT+CVLH+++E+EKE +LCGHSE+LAIAFGILN+PPGTTIRVAKNLRVCNDC
Sbjct: 718  LKKEGYVPDTACVLHDIDEEEKETILCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDC 777

Query: 543  HAATKIISKXXXXXXXXXXXXXFHHFRNGICSCGDYW 653
            H A+K ISK             FHHF++G CSCGDYW
Sbjct: 778  HTASKFISKIEDREIILRDARRFHHFKDGTCSCGDYW 814


>ref|NP_191302.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|218525905|sp|Q7Y211.2|PP285_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At3g57430, chloroplastic; Flags: Precursor
            gi|332646133|gb|AEE79654.1| pentatricopeptide
            repeat-containing protein [Arabidopsis thaliana]
          Length = 890

 Score =  325 bits (833), Expect = 6e-87
 Identities = 154/217 (70%), Positives = 173/217 (79%)
 Frame = +3

Query: 3    YKLVNAMPPNYDKAGAWSSLLGACRIHQNVELGEIAANNLLELEPDVASHYVLLSNIYSS 182
            Y+L+N MP +++KAGAWSSLLGA RIH N+E+GEIAA NL++LEP+VASHYVLL+NIYSS
Sbjct: 674  YQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSS 733

Query: 183  AGLWEKAMEVRKNMMKMGVRKEPGCSWIEFGDEVHKFTAGDASHPQSEQLHGXXXXXXXX 362
            AGLW+KA EVR+NM + GVRKEPGCSWIE GDEVHKF AGD+SHPQSE+L G        
Sbjct: 734  AGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWER 793

Query: 363  XXXXGYVPDTSCVLHNVNEDEKENLLCGHSERLAIAFGILNSPPGTTIRVAKNLRVCNDC 542
                GYVPDTSCVLHNV EDEKE LLCGHSE+LAIAFGILN+ PGT IRVAKNLRVCNDC
Sbjct: 794  MRKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDC 853

Query: 543  HAATKIISKXXXXXXXXXXXXXFHHFRNGICSCGDYW 653
            H ATK ISK             FH F+NG CSCGDYW
Sbjct: 854  HLATKFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 890


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