BLASTX nr result

ID: Panax21_contig00020629 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00020629
         (710 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303149.1| predicted protein [Populus trichocarpa] gi|2...   194   2e-64
ref|XP_004146283.1| PREDICTED: ATP-dependent DNA helicase Q-like...   190   3e-63
emb|CBI29756.3| unnamed protein product [Vitis vinifera]              189   4e-63
ref|XP_002265586.1| PREDICTED: ATP-dependent DNA helicase Q-like...   189   4e-63
ref|XP_002530679.1| DNA helicase hus2, putative [Ricinus communi...   189   7e-63

>ref|XP_002303149.1| predicted protein [Populus trichocarpa] gi|222840581|gb|EEE78128.1|
           predicted protein [Populus trichocarpa]
          Length = 1194

 Score =  194 bits (492), Expect(2) = 2e-64
 Identities = 101/171 (59%), Positives = 123/171 (71%), Gaps = 9/171 (5%)
 Frame = +1

Query: 1   EAANHLQGMKDMLISISNDLLDNVSNLDPDQIEKLHQDRLQLNKQIKELEKHLRTTSADE 180
           EAA HLQ MKDMLI++SNDLLDN + L   QI+KL QDRLQLNKQI++LEK+LR    DE
Sbjct: 288 EAAKHLQEMKDMLIAVSNDLLDNAAELSQAQIDKLRQDRLQLNKQIQQLEKYLR----DE 343

Query: 181 ERQKSYFFASIVAPRTFNYETPPAVAYKIDLVRLDSQFHMCNKPDGFDRWNS-------- 336
           ERQKS+F AS +  R   YETP + A KID +R D+Q H+ N  +G+++WN+        
Sbjct: 344 ERQKSHFSASTLV-RNLQYETPQSAACKIDPMRFDAQVHLRNDLNGYEKWNAPSVSFSSI 402

Query: 337 -SFGVPPTPVEREPYIPKYVDVNYIEGSNDKMWSSREFHWTTKLEDNNKRV 486
            SFGV   P+EREPYIP +V+VNYIEGSND  WSS  F WT KLE NNK+V
Sbjct: 403 DSFGVSSVPLEREPYIPSFVEVNYIEGSNDPKWSSTNFPWTKKLEANNKKV 453



 Score = 78.2 bits (191), Expect(2) = 2e-64
 Identities = 37/42 (88%), Positives = 39/42 (92%)
 Frame = +3

Query: 570 KRVFGNQSFRPNQREVINATMSRRDVFVLMPTGGGKSLTYQI 695
           K+VFGN SFRPNQREVINATMS  DVFVLMPTGGGKSLTYQ+
Sbjct: 451 KKVFGNHSFRPNQREVINATMSGYDVFVLMPTGGGKSLTYQL 492


>ref|XP_004146283.1| PREDICTED: ATP-dependent DNA helicase Q-like 4A-like, partial
           [Cucumis sativus] gi|449511185|ref|XP_004163888.1|
           PREDICTED: ATP-dependent DNA helicase Q-like 4A-like,
           partial [Cucumis sativus]
          Length = 1269

 Score =  190 bits (483), Expect(2) = 3e-63
 Identities = 94/170 (55%), Positives = 121/170 (71%), Gaps = 8/170 (4%)
 Frame = +1

Query: 1   EAANHLQGMKDMLISISNDLLDNVSNLDPDQIEKLHQDRLQLNKQIKELEKHLRTTSADE 180
           EA++HLQ +KD LISISNDLLDNV+NL P QI+KL Q+R+ LNKQI+ LE+H+   + +E
Sbjct: 343 EASSHLQELKDRLISISNDLLDNVNNLSPVQIDKLRQERVHLNKQIQLLERHISLDAVNE 402

Query: 181 ERQKSYFFASIVAPRTFNYETPPAVAYKIDLVRLDSQFHMCNKPDGFDRWNS-------- 336
           ER++S+ FA+ V P+TF++ETPP V ++ D     S  H   +P   + WNS        
Sbjct: 403 ERRRSHLFATTVTPKTFHFETPPGVEFRTDAKLNTSYVHQDFEPRRIEPWNSMGSSYVDE 462

Query: 337 SFGVPPTPVEREPYIPKYVDVNYIEGSNDKMWSSREFHWTTKLEDNNKRV 486
            FG+   PVEREPYIPK +DVNYIEGSNDK WSSR F WT +LE NNK+V
Sbjct: 463 RFGMSSGPVEREPYIPKVIDVNYIEGSNDKKWSSRNFSWTKELEANNKKV 512



 Score = 78.2 bits (191), Expect(2) = 3e-63
 Identities = 37/42 (88%), Positives = 39/42 (92%)
 Frame = +3

Query: 570 KRVFGNQSFRPNQREVINATMSRRDVFVLMPTGGGKSLTYQI 695
           K+VFGN SFRPNQREVINATMS  DVFVLMPTGGGKSLTYQ+
Sbjct: 510 KKVFGNHSFRPNQREVINATMSGYDVFVLMPTGGGKSLTYQL 551


>emb|CBI29756.3| unnamed protein product [Vitis vinifera]
          Length = 1235

 Score =  189 bits (481), Expect(2) = 4e-63
 Identities = 99/171 (57%), Positives = 122/171 (71%), Gaps = 9/171 (5%)
 Frame = +1

Query: 1   EAANHLQGMKDMLISISNDLLDNVSNLDPDQIEKLHQDRLQLNKQIKELEKHLRTTSADE 180
           EAANHLQ +KDMLI ISN+LLDNV +L   Q+EKL QDRL LNKQI++LE HL + S DE
Sbjct: 265 EAANHLQELKDMLIVISNELLDNV-DLTSVQVEKLRQDRLYLNKQIQQLEIHLHSVSVDE 323

Query: 181 ERQKSYFFASIVAPRTFNYETPPAVAYKIDLVRLDSQFHMCNKPDGFDRWNSS------- 339
           ER+ S F AS   P    ++TPPA A  ID +R D+Q H+ N+P  +++WN+S       
Sbjct: 324 ERKNSNFSASTTTPWA-QFQTPPATAVGIDPMRFDAQVHLRNEPGNYEKWNTSSVSFSSI 382

Query: 340 --FGVPPTPVEREPYIPKYVDVNYIEGSNDKMWSSREFHWTTKLEDNNKRV 486
             FGV P P+EREPYIPK ++VNYIEGS+DK WSS  F WT KLE NNK+V
Sbjct: 383 DRFGVTPYPLEREPYIPKLIEVNYIEGSSDKKWSSGNFPWTKKLEANNKKV 433



 Score = 78.2 bits (191), Expect(2) = 4e-63
 Identities = 37/42 (88%), Positives = 39/42 (92%)
 Frame = +3

Query: 570 KRVFGNQSFRPNQREVINATMSRRDVFVLMPTGGGKSLTYQI 695
           K+VFGN SFRPNQREVINATMS  DVFVLMPTGGGKSLTYQ+
Sbjct: 431 KKVFGNHSFRPNQREVINATMSGYDVFVLMPTGGGKSLTYQL 472


>ref|XP_002265586.1| PREDICTED: ATP-dependent DNA helicase Q-like 4A-like [Vitis
           vinifera]
          Length = 1224

 Score =  189 bits (481), Expect(2) = 4e-63
 Identities = 99/171 (57%), Positives = 122/171 (71%), Gaps = 9/171 (5%)
 Frame = +1

Query: 1   EAANHLQGMKDMLISISNDLLDNVSNLDPDQIEKLHQDRLQLNKQIKELEKHLRTTSADE 180
           EAANHLQ +KDMLI ISN+LLDNV +L   Q+EKL QDRL LNKQI++LE HL + S DE
Sbjct: 254 EAANHLQELKDMLIVISNELLDNV-DLTSVQVEKLRQDRLYLNKQIQQLEIHLHSVSVDE 312

Query: 181 ERQKSYFFASIVAPRTFNYETPPAVAYKIDLVRLDSQFHMCNKPDGFDRWNSS------- 339
           ER+ S F AS   P    ++TPPA A  ID +R D+Q H+ N+P  +++WN+S       
Sbjct: 313 ERKNSNFSASTTTPWA-QFQTPPATAVGIDPMRFDAQVHLRNEPGNYEKWNTSSVSFSSI 371

Query: 340 --FGVPPTPVEREPYIPKYVDVNYIEGSNDKMWSSREFHWTTKLEDNNKRV 486
             FGV P P+EREPYIPK ++VNYIEGS+DK WSS  F WT KLE NNK+V
Sbjct: 372 DRFGVTPYPLEREPYIPKLIEVNYIEGSSDKKWSSGNFPWTKKLEANNKKV 422



 Score = 78.2 bits (191), Expect(2) = 4e-63
 Identities = 37/42 (88%), Positives = 39/42 (92%)
 Frame = +3

Query: 570 KRVFGNQSFRPNQREVINATMSRRDVFVLMPTGGGKSLTYQI 695
           K+VFGN SFRPNQREVINATMS  DVFVLMPTGGGKSLTYQ+
Sbjct: 420 KKVFGNHSFRPNQREVINATMSGYDVFVLMPTGGGKSLTYQL 461


>ref|XP_002530679.1| DNA helicase hus2, putative [Ricinus communis]
           gi|223529772|gb|EEF31710.1| DNA helicase hus2, putative
           [Ricinus communis]
          Length = 1233

 Score =  189 bits (480), Expect(2) = 7e-63
 Identities = 99/171 (57%), Positives = 122/171 (71%), Gaps = 9/171 (5%)
 Frame = +1

Query: 1   EAANHLQGMKDMLISISNDLLDNVSNLDPDQIEKLHQDRLQLNKQIKELEKHLRTTSADE 180
           EA NHLQ MKDMLI++SN+LLDN +NL   QIEKL QDRLQLNKQI++LE +LR    D+
Sbjct: 289 EAGNHLQEMKDMLIAVSNELLDNSTNLSSVQIEKLRQDRLQLNKQIQQLESYLR----DK 344

Query: 181 ERQKSYFFASIVAPRTFNYETPPAVAYKIDLVRLDSQFHMCNKPDGFDRWNS-------- 336
           ERQKS+F AS  A + F YETP   A KID +R D+Q ++ N+  G++ WN+        
Sbjct: 345 ERQKSHFSAS-TANQNFQYETPQCAANKIDPMRFDAQVYLRNESGGYESWNTPSISFSSV 403

Query: 337 -SFGVPPTPVEREPYIPKYVDVNYIEGSNDKMWSSREFHWTTKLEDNNKRV 486
             FG+   P+EREPYIPK+V+VNYIEGSND  WSS  F WTTKLE  NK+V
Sbjct: 404 DRFGISSGPIEREPYIPKFVEVNYIEGSNDPKWSSTNFPWTTKLEAYNKKV 454



 Score = 77.8 bits (190), Expect(2) = 7e-63
 Identities = 37/42 (88%), Positives = 39/42 (92%)
 Frame = +3

Query: 570 KRVFGNQSFRPNQREVINATMSRRDVFVLMPTGGGKSLTYQI 695
           K+VFGN SFRPNQREVINATMS  DVFVLMPTGGGKSLTYQ+
Sbjct: 452 KKVFGNHSFRPNQREVINATMSGFDVFVLMPTGGGKSLTYQL 493


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