BLASTX nr result
ID: Panax21_contig00020628
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00020628 (439 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI29756.3| unnamed protein product [Vitis vinifera] 121 4e-31 ref|XP_002265586.1| PREDICTED: ATP-dependent DNA helicase Q-like... 121 4e-31 ref|XP_002303149.1| predicted protein [Populus trichocarpa] gi|2... 124 5e-31 ref|XP_002530679.1| DNA helicase hus2, putative [Ricinus communi... 129 7e-31 ref|XP_004146283.1| PREDICTED: ATP-dependent DNA helicase Q-like... 130 1e-28 >emb|CBI29756.3| unnamed protein product [Vitis vinifera] Length = 1235 Score = 121 bits (304), Expect(2) = 4e-31 Identities = 65/110 (59%), Positives = 71/110 (64%) Frame = +1 Query: 106 REPYIPKYVDVNYIKGSNDKMWSSREFHCTTKLEVYTYTNLKVFNLP*MLSLLLFIFFTP 285 REPYIPK ++VNYI+GS+DK WSS F T KLE Sbjct: 394 REPYIPKLIEVNYIEGSSDKKWSSGNFPWTKKLEA------------------------- 428 Query: 286 KDNNKRVFGNHSFRPNQKEVINVTMS*RDVFVLMPTGGGKSLTYQLPAYI 435 NNK+VFGNHSFRPNQ+EVIN TMS DVFVLMPTGGGKSLTYQLPA I Sbjct: 429 --NNKKVFGNHSFRPNQREVINATMSGYDVFVLMPTGGGKSLTYQLPALI 476 Score = 38.1 bits (87), Expect(2) = 4e-31 Identities = 17/43 (39%), Positives = 26/43 (60%), Gaps = 9/43 (20%) Frame = +3 Query: 6 IDPVRLESQFHIHNEPDGFDRLNSS---------FGVPPTPIE 107 IDP+R ++Q H+ NEP +++ N+S FGV P P+E Sbjct: 351 IDPMRFDAQVHLRNEPGNYEKWNTSSVSFSSIDRFGVTPYPLE 393 >ref|XP_002265586.1| PREDICTED: ATP-dependent DNA helicase Q-like 4A-like [Vitis vinifera] Length = 1224 Score = 121 bits (304), Expect(2) = 4e-31 Identities = 65/110 (59%), Positives = 71/110 (64%) Frame = +1 Query: 106 REPYIPKYVDVNYIKGSNDKMWSSREFHCTTKLEVYTYTNLKVFNLP*MLSLLLFIFFTP 285 REPYIPK ++VNYI+GS+DK WSS F T KLE Sbjct: 383 REPYIPKLIEVNYIEGSSDKKWSSGNFPWTKKLEA------------------------- 417 Query: 286 KDNNKRVFGNHSFRPNQKEVINVTMS*RDVFVLMPTGGGKSLTYQLPAYI 435 NNK+VFGNHSFRPNQ+EVIN TMS DVFVLMPTGGGKSLTYQLPA I Sbjct: 418 --NNKKVFGNHSFRPNQREVINATMSGYDVFVLMPTGGGKSLTYQLPALI 465 Score = 38.1 bits (87), Expect(2) = 4e-31 Identities = 17/43 (39%), Positives = 26/43 (60%), Gaps = 9/43 (20%) Frame = +3 Query: 6 IDPVRLESQFHIHNEPDGFDRLNSS---------FGVPPTPIE 107 IDP+R ++Q H+ NEP +++ N+S FGV P P+E Sbjct: 340 IDPMRFDAQVHLRNEPGNYEKWNTSSVSFSSIDRFGVTPYPLE 382 >ref|XP_002303149.1| predicted protein [Populus trichocarpa] gi|222840581|gb|EEE78128.1| predicted protein [Populus trichocarpa] Length = 1194 Score = 124 bits (312), Expect(2) = 5e-31 Identities = 65/111 (58%), Positives = 71/111 (63%) Frame = +1 Query: 106 REPYIPKYVDVNYIKGSNDKMWSSREFHCTTKLEVYTYTNLKVFNLP*MLSLLLFIFFTP 285 REPYIP +V+VNYI+GSND WSS F T KLE Sbjct: 414 REPYIPSFVEVNYIEGSNDPKWSSTNFPWTKKLEA------------------------- 448 Query: 286 KDNNKRVFGNHSFRPNQKEVINVTMS*RDVFVLMPTGGGKSLTYQLPAYIC 438 NNK+VFGNHSFRPNQ+EVIN TMS DVFVLMPTGGGKSLTYQLPA +C Sbjct: 449 --NNKKVFGNHSFRPNQREVINATMSGYDVFVLMPTGGGKSLTYQLPALVC 497 Score = 34.7 bits (78), Expect(2) = 5e-31 Identities = 15/44 (34%), Positives = 27/44 (61%), Gaps = 9/44 (20%) Frame = +3 Query: 3 RIDPVRLESQFHIHNEPDGFDRLNS---------SFGVPPTPIE 107 +IDP+R ++Q H+ N+ +G+++ N+ SFGV P+E Sbjct: 370 KIDPMRFDAQVHLRNDLNGYEKWNAPSVSFSSIDSFGVSSVPLE 413 >ref|XP_002530679.1| DNA helicase hus2, putative [Ricinus communis] gi|223529772|gb|EEF31710.1| DNA helicase hus2, putative [Ricinus communis] Length = 1233 Score = 129 bits (323), Expect(2) = 7e-31 Identities = 67/111 (60%), Positives = 73/111 (65%) Frame = +1 Query: 106 REPYIPKYVDVNYIKGSNDKMWSSREFHCTTKLEVYTYTNLKVFNLP*MLSLLLFIFFTP 285 REPYIPK+V+VNYI+GSND WSS F TTKLE Y Sbjct: 415 REPYIPKFVEVNYIEGSNDPKWSSTNFPWTTKLEAY------------------------ 450 Query: 286 KDNNKRVFGNHSFRPNQKEVINVTMS*RDVFVLMPTGGGKSLTYQLPAYIC 438 NK+VFGNHSFRPNQ+EVIN TMS DVFVLMPTGGGKSLTYQLPA +C Sbjct: 451 ---NKKVFGNHSFRPNQREVINATMSGFDVFVLMPTGGGKSLTYQLPALVC 498 Score = 30.0 bits (66), Expect(2) = 7e-31 Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 9/44 (20%) Frame = +3 Query: 3 RIDPVRLESQFHIHNEPDGFDRLNS---------SFGVPPTPIE 107 +IDP+R ++Q ++ NE G++ N+ FG+ PIE Sbjct: 371 KIDPMRFDAQVYLRNESGGYESWNTPSISFSSVDRFGISSGPIE 414 >ref|XP_004146283.1| PREDICTED: ATP-dependent DNA helicase Q-like 4A-like, partial [Cucumis sativus] gi|449511185|ref|XP_004163888.1| PREDICTED: ATP-dependent DNA helicase Q-like 4A-like, partial [Cucumis sativus] Length = 1269 Score = 130 bits (326), Expect = 1e-28 Identities = 68/111 (61%), Positives = 73/111 (65%) Frame = +1 Query: 106 REPYIPKYVDVNYIKGSNDKMWSSREFHCTTKLEVYTYTNLKVFNLP*MLSLLLFIFFTP 285 REPYIPK +DVNYI+GSNDK WSSR F T +LE Sbjct: 473 REPYIPKVIDVNYIEGSNDKKWSSRNFSWTKELEA------------------------- 507 Query: 286 KDNNKRVFGNHSFRPNQKEVINVTMS*RDVFVLMPTGGGKSLTYQLPAYIC 438 NNK+VFGNHSFRPNQ+EVIN TMS DVFVLMPTGGGKSLTYQLPA IC Sbjct: 508 --NNKKVFGNHSFRPNQREVINATMSGYDVFVLMPTGGGKSLTYQLPALIC 556