BLASTX nr result

ID: Panax21_contig00020627 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00020627
         (558 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303149.1| predicted protein [Populus trichocarpa] gi|2...   100   2e-19
emb|CBI29756.3| unnamed protein product [Vitis vinifera]               96   5e-18
ref|XP_002265586.1| PREDICTED: ATP-dependent DNA helicase Q-like...    96   5e-18
ref|XP_002530679.1| DNA helicase hus2, putative [Ricinus communi...    93   2e-17
ref|XP_004146283.1| PREDICTED: ATP-dependent DNA helicase Q-like...    74   1e-11

>ref|XP_002303149.1| predicted protein [Populus trichocarpa] gi|222840581|gb|EEE78128.1|
           predicted protein [Populus trichocarpa]
          Length = 1194

 Score =  100 bits (249), Expect = 2e-19
 Identities = 53/97 (54%), Positives = 66/97 (68%), Gaps = 9/97 (9%)
 Frame = +2

Query: 293 RLQLDKQIQELEKYLRTTSADEERQKSHFSTSTAAPRTFNYETPPTVAYRIDPVRLDSQF 472
           RLQL+KQIQ+LEKYLR    DEERQKSHFS ST   R   YETP + A +IDP+R D+Q 
Sbjct: 326 RLQLNKQIQQLEKYLR----DEERQKSHFSASTLV-RNLQYETPQSAACKIDPMRFDAQV 380

Query: 473 HMRNKPDGFDRWNS---------SFSVPPTPVEREPY 556
           H+RN  +G+++WN+         SF V   P+EREPY
Sbjct: 381 HLRNDLNGYEKWNAPSVSFSSIDSFGVSSVPLEREPY 417


>emb|CBI29756.3| unnamed protein product [Vitis vinifera]
          Length = 1235

 Score = 95.5 bits (236), Expect = 5e-18
 Identities = 47/97 (48%), Positives = 64/97 (65%), Gaps = 9/97 (9%)
 Frame = +2

Query: 293 RLQLDKQIQELEKYLRTTSADEERQKSHFSTSTAAPRTFNYETPPTVAYRIDPVRLDSQF 472
           RL L+KQIQ+LE +L + S DEER+ S+FS ST  P    ++TPP  A  IDP+R D+Q 
Sbjct: 302 RLYLNKQIQQLEIHLHSVSVDEERKNSNFSASTTTPWA-QFQTPPATAVGIDPMRFDAQV 360

Query: 473 HMRNKPDGFDRWNSS---------FSVPPTPVEREPY 556
           H+RN+P  +++WN+S         F V P P+EREPY
Sbjct: 361 HLRNEPGNYEKWNTSSVSFSSIDRFGVTPYPLEREPY 397


>ref|XP_002265586.1| PREDICTED: ATP-dependent DNA helicase Q-like 4A-like [Vitis
           vinifera]
          Length = 1224

 Score = 95.5 bits (236), Expect = 5e-18
 Identities = 47/97 (48%), Positives = 64/97 (65%), Gaps = 9/97 (9%)
 Frame = +2

Query: 293 RLQLDKQIQELEKYLRTTSADEERQKSHFSTSTAAPRTFNYETPPTVAYRIDPVRLDSQF 472
           RL L+KQIQ+LE +L + S DEER+ S+FS ST  P    ++TPP  A  IDP+R D+Q 
Sbjct: 291 RLYLNKQIQQLEIHLHSVSVDEERKNSNFSASTTTPWA-QFQTPPATAVGIDPMRFDAQV 349

Query: 473 HMRNKPDGFDRWNSS---------FSVPPTPVEREPY 556
           H+RN+P  +++WN+S         F V P P+EREPY
Sbjct: 350 HLRNEPGNYEKWNTSSVSFSSIDRFGVTPYPLEREPY 386


>ref|XP_002530679.1| DNA helicase hus2, putative [Ricinus communis]
           gi|223529772|gb|EEF31710.1| DNA helicase hus2, putative
           [Ricinus communis]
          Length = 1233

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 49/97 (50%), Positives = 64/97 (65%), Gaps = 9/97 (9%)
 Frame = +2

Query: 293 RLQLDKQIQELEKYLRTTSADEERQKSHFSTSTAAPRTFNYETPPTVAYRIDPVRLDSQF 472
           RLQL+KQIQ+LE YLR    D+ERQKSHFS STA  + F YETP   A +IDP+R D+Q 
Sbjct: 327 RLQLNKQIQQLESYLR----DKERQKSHFSASTAN-QNFQYETPQCAANKIDPMRFDAQV 381

Query: 473 HMRNKPDGFDRWNS---------SFSVPPTPVEREPY 556
           ++RN+  G++ WN+          F +   P+EREPY
Sbjct: 382 YLRNESGGYESWNTPSISFSSVDRFGISSGPIEREPY 418


>ref|XP_004146283.1| PREDICTED: ATP-dependent DNA helicase Q-like 4A-like, partial
           [Cucumis sativus] gi|449511185|ref|XP_004163888.1|
           PREDICTED: ATP-dependent DNA helicase Q-like 4A-like,
           partial [Cucumis sativus]
          Length = 1269

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 38/96 (39%), Positives = 55/96 (57%), Gaps = 8/96 (8%)
 Frame = +2

Query: 293 RLQLDKQIQELEKYLRTTSADEERQKSHFSTSTAAPRTFNYETPPTVAYRIDPVRLDSQF 472
           R+ L+KQIQ LE+++   + +EER++SH   +T  P+TF++ETPP V +R D     S  
Sbjct: 381 RVHLNKQIQLLERHISLDAVNEERRRSHLFATTVTPKTFHFETPPGVEFRTDAKLNTSYV 440

Query: 473 HMRNKPDGFDRWNS--------SFSVPPTPVEREPY 556
           H   +P   + WNS         F +   PVEREPY
Sbjct: 441 HQDFEPRRIEPWNSMGSSYVDERFGMSSGPVEREPY 476


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