BLASTX nr result

ID: Panax21_contig00020618 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00020618
         (533 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK38297.1| unknown [Lotus japonicus] gi|388514645|gb|AFK4538...   122   4e-26
ref|XP_002318497.1| predicted protein [Populus trichocarpa] gi|1...   122   4e-26
ref|XP_002321357.1| predicted protein [Populus trichocarpa] gi|2...   120   1e-25
ref|XP_003634175.1| PREDICTED: uncharacterized protein LOC100853...   119   2e-25
ref|XP_003522525.1| PREDICTED: uncharacterized protein LOC100799...   117   1e-24

>gb|AFK38297.1| unknown [Lotus japonicus] gi|388514645|gb|AFK45384.1| unknown
           [Lotus japonicus]
          Length = 158

 Score =  122 bits (305), Expect = 4e-26
 Identities = 51/85 (60%), Positives = 68/85 (80%), Gaps = 1/85 (1%)
 Frame = -3

Query: 513 NNADSPDISVVAEKGQVACRDFPHSRHSCAKYPFEKTTHESYCELCYCFVCDIAAPCKNW 334
           N+ D+ +ISVVAEKGQVACRD+PHSRH C K+PF  T H+SYC++CYC+VCD AAPCK W
Sbjct: 67  NDDDAAEISVVAEKGQVACRDYPHSRHLCIKFPFTTTPHQSYCDMCYCYVCDSAAPCKYW 126

Query: 333 TGLS-GHCHAVNNEAWKAQRKVMQQ 262
           T L+  HC A ++ +WK +RK+ ++
Sbjct: 127 TQLAVPHCDADSSASWKERRKMKKE 151


>ref|XP_002318497.1| predicted protein [Populus trichocarpa] gi|118481451|gb|ABK92668.1|
           unknown [Populus trichocarpa]
           gi|222859170|gb|EEE96717.1| predicted protein [Populus
           trichocarpa]
          Length = 172

 Score =  122 bits (305), Expect = 4e-26
 Identities = 57/97 (58%), Positives = 70/97 (72%), Gaps = 4/97 (4%)
 Frame = -3

Query: 525 SEGSNNADSPDISVVAEKGQVACRDFPHSRHSCAKYPFEKTTHESYCELCYCFVCDIAAP 346
           S   ++ D  D+SVVAEKGQVACRD+PHSRH C K+PF+KT HESYCELCYC+VCD AAP
Sbjct: 75  SFSDDDGDGGDLSVVAEKGQVACRDYPHSRHLCIKFPFDKTPHESYCELCYCYVCDCAAP 134

Query: 345 CKNW-TGLSGHCHAVNNEA-WKAQR--KVMQQLQNPN 247
           CK+W    S HC+A      WK QR  K  ++++ PN
Sbjct: 135 CKDWKDSESAHCNASEKIGDWKEQRWLKRKEEIKLPN 171


>ref|XP_002321357.1| predicted protein [Populus trichocarpa] gi|222868353|gb|EEF05484.1|
           predicted protein [Populus trichocarpa]
          Length = 139

 Score =  120 bits (302), Expect = 1e-25
 Identities = 53/80 (66%), Positives = 62/80 (77%), Gaps = 2/80 (2%)
 Frame = -3

Query: 495 DISVVAEKGQVACRDFPHSRHSCAKYPFEKTTHESYCELCYCFVCDIAAPCKNW-TGLSG 319
           D+SVVAEKGQVACRD+PHSRH C KYPF+KT HESYCELCYC+VCD AAPCK+W    S 
Sbjct: 52  DLSVVAEKGQVACRDYPHSRHLCTKYPFDKTPHESYCELCYCYVCDCAAPCKDWKDSKSA 111

Query: 318 HCHAVNNEA-WKAQRKVMQQ 262
           HC A      WK QR++ ++
Sbjct: 112 HCSASEKVGDWKEQRRLKRK 131


>ref|XP_003634175.1| PREDICTED: uncharacterized protein LOC100853301 [Vitis vinifera]
           gi|302143992|emb|CBI23097.3| unnamed protein product
           [Vitis vinifera]
          Length = 169

 Score =  119 bits (299), Expect = 2e-25
 Identities = 52/90 (57%), Positives = 67/90 (74%), Gaps = 4/90 (4%)
 Frame = -3

Query: 531 SVSEGSNNADSPDISVVAEKGQVACRDFPHSRHSCAKYPFEKTTHES--YCELCYCFVCD 358
           S++E   ++D  D+ V+++KGQVACRD+PH+RH C K+PFE+T HE   YC+LCYC+VCD
Sbjct: 74  SITEEHADSDDADLHVISQKGQVACRDYPHARHLCVKFPFEETPHERYYYCQLCYCYVCD 133

Query: 357 IAAPCKNWTG-LSGHCHAVNNEA-WKAQRK 274
            AAPCK WT    GHCHA   +A WK QRK
Sbjct: 134 SAAPCKYWTAPQPGHCHATEQDAHWKLQRK 163


>ref|XP_003522525.1| PREDICTED: uncharacterized protein LOC100799371 [Glycine max]
          Length = 167

 Score =  117 bits (293), Expect = 1e-24
 Identities = 48/80 (60%), Positives = 62/80 (77%)
 Frame = -3

Query: 510 NADSPDISVVAEKGQVACRDFPHSRHSCAKYPFEKTTHESYCELCYCFVCDIAAPCKNWT 331
           ++ + D+SV+AEKGQVACRD+PHSRH C K+PF  T HESYCE+CYC+VCD AAPCK+W 
Sbjct: 66  DSSADDVSVIAEKGQVACRDYPHSRHLCLKFPFTTTPHESYCEMCYCYVCDTAAPCKDWK 125

Query: 330 GLSGHCHAVNNEAWKAQRKV 271
           G   HC+A +   WK +R +
Sbjct: 126 G--WHCNAESGIYWKNKRSL 143


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