BLASTX nr result

ID: Panax21_contig00020603 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00020603
         (546 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29903.3| unnamed protein product [Vitis vinifera]              124   9e-27
ref|XP_002277253.1| PREDICTED: uncharacterized protein LOC100245...   124   9e-27
ref|XP_002532403.1| conserved hypothetical protein [Ricinus comm...   119   3e-25
ref|NP_181755.1| uv-b-insensitive 4 [Arabidopsis thaliana] gi|26...   114   1e-23
ref|XP_002323297.1| predicted protein [Populus trichocarpa] gi|2...   112   3e-23

>emb|CBI29903.3| unnamed protein product [Vitis vinifera]
          Length = 244

 Score =  124 bits (311), Expect = 9e-27
 Identities = 62/85 (72%), Positives = 74/85 (87%)
 Frame = -3

Query: 544 SMISPSPTIGIRQFPPSVGKVPKILLDIANQNAGESDFLTPEKKLLNSIDTVEKVVMEEL 365
           SMISPSPT G++  P +VGKVPKILLDI +Q  G SDFLTP+KKLLNSIDTVEK VM+EL
Sbjct: 160 SMISPSPTSGMKLVPKAVGKVPKILLDITDQTGGGSDFLTPQKKLLNSIDTVEKAVMDEL 219

Query: 364 RRLKRTPTAKKAERERKVCTLMSMR 290
            +LKRTP+AK+AE+E++V TLMSMR
Sbjct: 220 GKLKRTPSAKRAEQEKRVRTLMSMR 244


>ref|XP_002277253.1| PREDICTED: uncharacterized protein LOC100245175 [Vitis vinifera]
          Length = 266

 Score =  124 bits (311), Expect = 9e-27
 Identities = 62/85 (72%), Positives = 74/85 (87%)
 Frame = -3

Query: 544 SMISPSPTIGIRQFPPSVGKVPKILLDIANQNAGESDFLTPEKKLLNSIDTVEKVVMEEL 365
           SMISPSPT G++  P +VGKVPKILLDI +Q  G SDFLTP+KKLLNSIDTVEK VM+EL
Sbjct: 182 SMISPSPTSGMKLVPKAVGKVPKILLDITDQTGGGSDFLTPQKKLLNSIDTVEKAVMDEL 241

Query: 364 RRLKRTPTAKKAERERKVCTLMSMR 290
            +LKRTP+AK+AE+E++V TLMSMR
Sbjct: 242 GKLKRTPSAKRAEQEKRVRTLMSMR 266


>ref|XP_002532403.1| conserved hypothetical protein [Ricinus communis]
           gi|223527899|gb|EEF29988.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 250

 Score =  119 bits (298), Expect = 3e-25
 Identities = 59/85 (69%), Positives = 75/85 (88%)
 Frame = -3

Query: 544 SMISPSPTIGIRQFPPSVGKVPKILLDIANQNAGESDFLTPEKKLLNSIDTVEKVVMEEL 365
           SM+SP P++ +++ PP+VGKV KILLDI N+ + +S+FLTP+KKLLNSIDTVEK VMEEL
Sbjct: 166 SMMSPIPSLQVKRCPPTVGKVSKILLDITNKASDDSEFLTPQKKLLNSIDTVEKEVMEEL 225

Query: 364 RRLKRTPTAKKAERERKVCTLMSMR 290
           R+LKRT +AKKAERE+KV TLMS+R
Sbjct: 226 RKLKRTASAKKAEREKKVRTLMSLR 250


>ref|NP_181755.1| uv-b-insensitive 4 [Arabidopsis thaliana] gi|2673916|gb|AAB88650.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|28950705|gb|AAO63276.1| At2g42260 [Arabidopsis
           thaliana] gi|110735686|dbj|BAE99823.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|330255003|gb|AEC10097.1| uv-b-insensitive 4
           [Arabidopsis thaliana]
          Length = 259

 Score =  114 bits (284), Expect = 1e-23
 Identities = 57/86 (66%), Positives = 71/86 (82%), Gaps = 1/86 (1%)
 Frame = -3

Query: 544 SMISPSPTIGI-RQFPPSVGKVPKILLDIANQNAGESDFLTPEKKLLNSIDTVEKVVMEE 368
           SM++P P+IG  R +PPS  KV +ILLDI  +N GE D LTPEKKLLNSID VEKVVMEE
Sbjct: 174 SMVTPGPSIGFKRPWPPSTAKVHQILLDITRENTGEEDALTPEKKLLNSIDKVEKVVMEE 233

Query: 367 LRRLKRTPTAKKAERERKVCTLMSMR 290
           ++++K TP+AK+AERE++V TLMSMR
Sbjct: 234 IQKMKSTPSAKRAEREKRVRTLMSMR 259


>ref|XP_002323297.1| predicted protein [Populus trichocarpa] gi|222867927|gb|EEF05058.1|
           predicted protein [Populus trichocarpa]
          Length = 247

 Score =  112 bits (281), Expect = 3e-23
 Identities = 56/84 (66%), Positives = 70/84 (83%)
 Frame = -3

Query: 541 MISPSPTIGIRQFPPSVGKVPKILLDIANQNAGESDFLTPEKKLLNSIDTVEKVVMEELR 362
           ++SP PT   +  P ++GKVPKIL  I NQ +G+ + LTP+KKLLNSIDTVEKVVMEEL+
Sbjct: 164 IMSPKPTPAFKGCPSTIGKVPKILQHITNQASGDPECLTPQKKLLNSIDTVEKVVMEELQ 223

Query: 361 RLKRTPTAKKAERERKVCTLMSMR 290
           +LKRTP+AKKAERE++V TLMSMR
Sbjct: 224 KLKRTPSAKKAEREKRVRTLMSMR 247


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