BLASTX nr result
ID: Panax21_contig00020584
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00020584 (1112 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002532829.1| dead box ATP-dependent RNA helicase, putativ... 102 9e-39 gb|EAZ24934.1| hypothetical protein OsJ_08714 [Oryza sativa Japo... 80 1e-27 gb|EAY87855.1| hypothetical protein OsI_09277 [Oryza sativa Indi... 80 1e-27 ref|XP_002279094.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 110 6e-22 ref|XP_004134588.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 109 1e-21 >ref|XP_002532829.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis] gi|223527420|gb|EEF29559.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis] Length = 469 Score = 102 bits (255), Expect(2) = 9e-39 Identities = 57/93 (61%), Positives = 62/93 (66%), Gaps = 3/93 (3%) Frame = +1 Query: 103 VKEVFNTIXXXXXXXXXXXXXXXXIADEISELIKRPKLEAGICYDLED---FSELQSSVD 273 VK+VF + IA EISELIKRPKLEAGICYD +D ELQ+SVD Sbjct: 119 VKQVFAALAPAVGLSVGLAVGQSSIAGEISELIKRPKLEAGICYDRDDVILMQELQTSVD 178 Query: 274 ILVATPGRLMDHIKNTKGFTLEHLRYLWFREGL 372 ILVATPGRLMDHI NTKGFTLEHL YL + L Sbjct: 179 ILVATPGRLMDHITNTKGFTLEHLCYLHLLDSL 211 Score = 85.1 bits (209), Expect(2) = 9e-39 Identities = 42/59 (71%), Positives = 49/59 (83%), Gaps = 3/59 (5%) Frame = +2 Query: 359 LERDF---SYPRLVKMVLSATLTQDPSKHSQLELHHPLFLTTGQMRYQLPNQLQSFNLV 526 +ER F SYPRL KMVLSATLTQDPSK QL+LHHPLFLTTGQ RYQLP +L+S+ ++ Sbjct: 232 VERGFKGKSYPRLAKMVLSATLTQDPSKLVQLDLHHPLFLTTGQSRYQLPEKLESYRVI 290 >gb|EAZ24934.1| hypothetical protein OsJ_08714 [Oryza sativa Japonica Group] Length = 499 Score = 79.7 bits (195), Expect(2) = 1e-27 Identities = 41/66 (62%), Positives = 51/66 (77%), Gaps = 3/66 (4%) Frame = +2 Query: 353 FGLERDF---SYPRLVKMVLSATLTQDPSKHSQLELHHPLFLTTGQMRYQLPNQLQSFNL 523 +G+ER F S+PRL K+VLSATLTQDPSK SQLEL HPL L +G+ RY++P +LQS+ L Sbjct: 239 WGVERGFKGKSFPRLAKIVLSATLTQDPSKLSQLELQHPLLLNSGKKRYRIPTKLQSYKL 298 Query: 524 V*PHNL 541 V NL Sbjct: 299 VCKSNL 304 Score = 70.9 bits (172), Expect(2) = 1e-27 Identities = 43/85 (50%), Positives = 50/85 (58%), Gaps = 1/85 (1%) Frame = +1 Query: 103 VKEVFNTIXXXXXXXXXXXXXXXXIADEISELIKRPKLEAGICYDLEDFS-ELQSSVDIL 279 VKEVF+ I IADE+S LI++ K D E E Q+ VDIL Sbjct: 122 VKEVFDAIAPVVGLSVGSAVGQSSIADEVSNLIEKSKQGLFPSLDEEYIQMEPQTKVDIL 181 Query: 280 VATPGRLMDHIKNTKGFTLEHLRYL 354 VATPGRLMDHI TKGF+LEHL+YL Sbjct: 182 VATPGRLMDHISMTKGFSLEHLQYL 206 >gb|EAY87855.1| hypothetical protein OsI_09277 [Oryza sativa Indica Group] Length = 499 Score = 79.7 bits (195), Expect(2) = 1e-27 Identities = 41/66 (62%), Positives = 51/66 (77%), Gaps = 3/66 (4%) Frame = +2 Query: 353 FGLERDF---SYPRLVKMVLSATLTQDPSKHSQLELHHPLFLTTGQMRYQLPNQLQSFNL 523 +G+ER F S+PRL K+VLSATLTQDPSK SQLEL HPL L +G+ RY++P +LQS+ L Sbjct: 239 WGVERGFKGKSFPRLAKIVLSATLTQDPSKLSQLELQHPLLLNSGKKRYRIPTKLQSYKL 298 Query: 524 V*PHNL 541 V NL Sbjct: 299 VCKSNL 304 Score = 70.9 bits (172), Expect(2) = 1e-27 Identities = 43/85 (50%), Positives = 50/85 (58%), Gaps = 1/85 (1%) Frame = +1 Query: 103 VKEVFNTIXXXXXXXXXXXXXXXXIADEISELIKRPKLEAGICYDLEDFS-ELQSSVDIL 279 VKEVF+ I IADE+S LI++ K D E E Q+ VDIL Sbjct: 122 VKEVFDAIAPVVGLSVGSAVGQSSIADEVSNLIEKSKQGLFPSLDEEYIQMEPQTKVDIL 181 Query: 280 VATPGRLMDHIKNTKGFTLEHLRYL 354 VATPGRLMDHI TKGF+LEHL+YL Sbjct: 182 VATPGRLMDHISMTKGFSLEHLQYL 206 >ref|XP_002279094.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 1 [Vitis vinifera] gi|297740757|emb|CBI30939.3| unnamed protein product [Vitis vinifera] Length = 516 Score = 110 bits (275), Expect = 6e-22 Identities = 61/85 (71%), Positives = 62/85 (72%), Gaps = 1/85 (1%) Frame = +1 Query: 103 VKEVFNTIXXXXXXXXXXXXXXXXIADEISELIKRPKLEAGICYDLEDFS-ELQSSVDIL 279 VKEVF I IADEISELIKRPKLEAGICYD ED S ELQSSVDIL Sbjct: 118 VKEVFAAIAPAVGLSVGLAVGQTSIADEISELIKRPKLEAGICYDPEDISLELQSSVDIL 177 Query: 280 VATPGRLMDHIKNTKGFTLEHLRYL 354 VATPGRLMDHI TKGFTL+HLRYL Sbjct: 178 VATPGRLMDHINTTKGFTLKHLRYL 202 Score = 83.6 bits (205), Expect = 8e-14 Identities = 42/60 (70%), Positives = 49/60 (81%), Gaps = 3/60 (5%) Frame = +2 Query: 356 GLERDF---SYPRLVKMVLSATLTQDPSKHSQLELHHPLFLTTGQMRYQLPNQLQSFNLV 526 G+ER F SYPRLVK+VLSATLTQDPSK + L+LHHPL LT GQ RYQLP +L+SF L+ Sbjct: 255 GVERGFKGRSYPRLVKIVLSATLTQDPSKLALLDLHHPLLLTAGQRRYQLPEKLKSFKLI 314 >ref|XP_004134588.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 1-like [Cucumis sativus] gi|449490565|ref|XP_004158642.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 1-like [Cucumis sativus] Length = 517 Score = 109 bits (273), Expect = 1e-21 Identities = 60/85 (70%), Positives = 63/85 (74%), Gaps = 1/85 (1%) Frame = +1 Query: 103 VKEVFNTIXXXXXXXXXXXXXXXXIADEISELIKRPKLEAGICYDLEDFS-ELQSSVDIL 279 VKEVF+ I IADEISELIKRPKLEAGICYD +DF ELQSSVDIL Sbjct: 118 VKEVFSAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPDDFLVELQSSVDIL 177 Query: 280 VATPGRLMDHIKNTKGFTLEHLRYL 354 VATPGRLMDHI TKGFTL+HLRYL Sbjct: 178 VATPGRLMDHINFTKGFTLQHLRYL 202 Score = 84.3 bits (207), Expect = 5e-14 Identities = 40/61 (65%), Positives = 50/61 (81%), Gaps = 3/61 (4%) Frame = +2 Query: 353 FGLERDFS---YPRLVKMVLSATLTQDPSKHSQLELHHPLFLTTGQMRYQLPNQLQSFNL 523 FG+ER F YPRL KMVLSATLTQDP K +QL+LHHPLFLTTG+ RY+LP +L+S+ + Sbjct: 254 FGVERGFKGKPYPRLAKMVLSATLTQDPGKLAQLDLHHPLFLTTGKRRYKLPEKLESYMM 313 Query: 524 V 526 + Sbjct: 314 I 314