BLASTX nr result

ID: Panax21_contig00020584 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00020584
         (1112 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532829.1| dead box ATP-dependent RNA helicase, putativ...   102   9e-39
gb|EAZ24934.1| hypothetical protein OsJ_08714 [Oryza sativa Japo...    80   1e-27
gb|EAY87855.1| hypothetical protein OsI_09277 [Oryza sativa Indi...    80   1e-27
ref|XP_002279094.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   110   6e-22
ref|XP_004134588.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   109   1e-21

>ref|XP_002532829.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223527420|gb|EEF29559.1| dead box ATP-dependent RNA
           helicase, putative [Ricinus communis]
          Length = 469

 Score =  102 bits (255), Expect(2) = 9e-39
 Identities = 57/93 (61%), Positives = 62/93 (66%), Gaps = 3/93 (3%)
 Frame = +1

Query: 103 VKEVFNTIXXXXXXXXXXXXXXXXIADEISELIKRPKLEAGICYDLED---FSELQSSVD 273
           VK+VF  +                IA EISELIKRPKLEAGICYD +D     ELQ+SVD
Sbjct: 119 VKQVFAALAPAVGLSVGLAVGQSSIAGEISELIKRPKLEAGICYDRDDVILMQELQTSVD 178

Query: 274 ILVATPGRLMDHIKNTKGFTLEHLRYLWFREGL 372
           ILVATPGRLMDHI NTKGFTLEHL YL   + L
Sbjct: 179 ILVATPGRLMDHITNTKGFTLEHLCYLHLLDSL 211



 Score = 85.1 bits (209), Expect(2) = 9e-39
 Identities = 42/59 (71%), Positives = 49/59 (83%), Gaps = 3/59 (5%)
 Frame = +2

Query: 359 LERDF---SYPRLVKMVLSATLTQDPSKHSQLELHHPLFLTTGQMRYQLPNQLQSFNLV 526
           +ER F   SYPRL KMVLSATLTQDPSK  QL+LHHPLFLTTGQ RYQLP +L+S+ ++
Sbjct: 232 VERGFKGKSYPRLAKMVLSATLTQDPSKLVQLDLHHPLFLTTGQSRYQLPEKLESYRVI 290


>gb|EAZ24934.1| hypothetical protein OsJ_08714 [Oryza sativa Japonica Group]
          Length = 499

 Score = 79.7 bits (195), Expect(2) = 1e-27
 Identities = 41/66 (62%), Positives = 51/66 (77%), Gaps = 3/66 (4%)
 Frame = +2

Query: 353 FGLERDF---SYPRLVKMVLSATLTQDPSKHSQLELHHPLFLTTGQMRYQLPNQLQSFNL 523
           +G+ER F   S+PRL K+VLSATLTQDPSK SQLEL HPL L +G+ RY++P +LQS+ L
Sbjct: 239 WGVERGFKGKSFPRLAKIVLSATLTQDPSKLSQLELQHPLLLNSGKKRYRIPTKLQSYKL 298

Query: 524 V*PHNL 541
           V   NL
Sbjct: 299 VCKSNL 304



 Score = 70.9 bits (172), Expect(2) = 1e-27
 Identities = 43/85 (50%), Positives = 50/85 (58%), Gaps = 1/85 (1%)
 Frame = +1

Query: 103 VKEVFNTIXXXXXXXXXXXXXXXXIADEISELIKRPKLEAGICYDLEDFS-ELQSSVDIL 279
           VKEVF+ I                IADE+S LI++ K       D E    E Q+ VDIL
Sbjct: 122 VKEVFDAIAPVVGLSVGSAVGQSSIADEVSNLIEKSKQGLFPSLDEEYIQMEPQTKVDIL 181

Query: 280 VATPGRLMDHIKNTKGFTLEHLRYL 354
           VATPGRLMDHI  TKGF+LEHL+YL
Sbjct: 182 VATPGRLMDHISMTKGFSLEHLQYL 206


>gb|EAY87855.1| hypothetical protein OsI_09277 [Oryza sativa Indica Group]
          Length = 499

 Score = 79.7 bits (195), Expect(2) = 1e-27
 Identities = 41/66 (62%), Positives = 51/66 (77%), Gaps = 3/66 (4%)
 Frame = +2

Query: 353 FGLERDF---SYPRLVKMVLSATLTQDPSKHSQLELHHPLFLTTGQMRYQLPNQLQSFNL 523
           +G+ER F   S+PRL K+VLSATLTQDPSK SQLEL HPL L +G+ RY++P +LQS+ L
Sbjct: 239 WGVERGFKGKSFPRLAKIVLSATLTQDPSKLSQLELQHPLLLNSGKKRYRIPTKLQSYKL 298

Query: 524 V*PHNL 541
           V   NL
Sbjct: 299 VCKSNL 304



 Score = 70.9 bits (172), Expect(2) = 1e-27
 Identities = 43/85 (50%), Positives = 50/85 (58%), Gaps = 1/85 (1%)
 Frame = +1

Query: 103 VKEVFNTIXXXXXXXXXXXXXXXXIADEISELIKRPKLEAGICYDLEDFS-ELQSSVDIL 279
           VKEVF+ I                IADE+S LI++ K       D E    E Q+ VDIL
Sbjct: 122 VKEVFDAIAPVVGLSVGSAVGQSSIADEVSNLIEKSKQGLFPSLDEEYIQMEPQTKVDIL 181

Query: 280 VATPGRLMDHIKNTKGFTLEHLRYL 354
           VATPGRLMDHI  TKGF+LEHL+YL
Sbjct: 182 VATPGRLMDHISMTKGFSLEHLQYL 206


>ref|XP_002279094.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 1 [Vitis vinifera]
           gi|297740757|emb|CBI30939.3| unnamed protein product
           [Vitis vinifera]
          Length = 516

 Score =  110 bits (275), Expect = 6e-22
 Identities = 61/85 (71%), Positives = 62/85 (72%), Gaps = 1/85 (1%)
 Frame = +1

Query: 103 VKEVFNTIXXXXXXXXXXXXXXXXIADEISELIKRPKLEAGICYDLEDFS-ELQSSVDIL 279
           VKEVF  I                IADEISELIKRPKLEAGICYD ED S ELQSSVDIL
Sbjct: 118 VKEVFAAIAPAVGLSVGLAVGQTSIADEISELIKRPKLEAGICYDPEDISLELQSSVDIL 177

Query: 280 VATPGRLMDHIKNTKGFTLEHLRYL 354
           VATPGRLMDHI  TKGFTL+HLRYL
Sbjct: 178 VATPGRLMDHINTTKGFTLKHLRYL 202



 Score = 83.6 bits (205), Expect = 8e-14
 Identities = 42/60 (70%), Positives = 49/60 (81%), Gaps = 3/60 (5%)
 Frame = +2

Query: 356 GLERDF---SYPRLVKMVLSATLTQDPSKHSQLELHHPLFLTTGQMRYQLPNQLQSFNLV 526
           G+ER F   SYPRLVK+VLSATLTQDPSK + L+LHHPL LT GQ RYQLP +L+SF L+
Sbjct: 255 GVERGFKGRSYPRLVKIVLSATLTQDPSKLALLDLHHPLLLTAGQRRYQLPEKLKSFKLI 314


>ref|XP_004134588.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 1-like [Cucumis
           sativus] gi|449490565|ref|XP_004158642.1| PREDICTED:
           DEAD-box ATP-dependent RNA helicase 1-like [Cucumis
           sativus]
          Length = 517

 Score =  109 bits (273), Expect = 1e-21
 Identities = 60/85 (70%), Positives = 63/85 (74%), Gaps = 1/85 (1%)
 Frame = +1

Query: 103 VKEVFNTIXXXXXXXXXXXXXXXXIADEISELIKRPKLEAGICYDLEDFS-ELQSSVDIL 279
           VKEVF+ I                IADEISELIKRPKLEAGICYD +DF  ELQSSVDIL
Sbjct: 118 VKEVFSAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPDDFLVELQSSVDIL 177

Query: 280 VATPGRLMDHIKNTKGFTLEHLRYL 354
           VATPGRLMDHI  TKGFTL+HLRYL
Sbjct: 178 VATPGRLMDHINFTKGFTLQHLRYL 202



 Score = 84.3 bits (207), Expect = 5e-14
 Identities = 40/61 (65%), Positives = 50/61 (81%), Gaps = 3/61 (4%)
 Frame = +2

Query: 353 FGLERDFS---YPRLVKMVLSATLTQDPSKHSQLELHHPLFLTTGQMRYQLPNQLQSFNL 523
           FG+ER F    YPRL KMVLSATLTQDP K +QL+LHHPLFLTTG+ RY+LP +L+S+ +
Sbjct: 254 FGVERGFKGKPYPRLAKMVLSATLTQDPGKLAQLDLHHPLFLTTGKRRYKLPEKLESYMM 313

Query: 524 V 526
           +
Sbjct: 314 I 314


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