BLASTX nr result

ID: Panax21_contig00020583 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00020583
         (578 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633401.1| PREDICTED: uncharacterized protein LOC100852...   180   1e-43
emb|CBI29694.3| unnamed protein product [Vitis vinifera]              180   1e-43
ref|XP_002328787.1| predicted protein [Populus trichocarpa] gi|2...   178   7e-43
ref|XP_002526435.1| conserved hypothetical protein [Ricinus comm...   172   3e-41
emb|CAN60293.1| hypothetical protein VITISV_023400 [Vitis vinifera]   131   9e-29

>ref|XP_003633401.1| PREDICTED: uncharacterized protein LOC100852735 [Vitis vinifera]
          Length = 322

 Score =  180 bits (457), Expect = 1e-43
 Identities = 104/196 (53%), Positives = 128/196 (65%), Gaps = 4/196 (2%)
 Frame = -2

Query: 577 YVVRDIAKSTIGKDKSTYIMVPKPDDKQFSEKSVSVAASG-TDVLEAENGVSGTTDNXXX 401
           YV+RD AKST  KDKST+I+VPK DD+  S+KSV++AA G  + LE E+GVSG  D    
Sbjct: 2   YVLRDTAKSTSAKDKSTFILVPKRDDQLLSDKSVNLAAGGGAEALEEESGVSGAVDAGKK 61

Query: 400 XXXXXXXXXXXISVPGGLSLKQTTTSRVTNSGGVAVPRQNHRREASGKIIRSILLNKNSR 221
                      IS      L+Q  TS V N  G   P+QN RRE SG+IIRSILLNK++R
Sbjct: 62  KVLLLKGKEREISHH---LLQQNVTSPVKNILGANAPKQNQRREGSGRIIRSILLNKDAR 118

Query: 220 QSLS-VLHSEAQIQTSN--PDKRPSRPSKVQLFLGDANGVSEDRVVANDLHGFCTEKQEK 50
           QS S +  +E Q Q SN   +KRP RP  +QL   + NG  +D+VV ND+H F +EKQ+K
Sbjct: 119 QSQSSMFQTEQQSQASNLEKEKRPPRPPHIQLASKETNGAQDDKVVGNDVHSFVSEKQDK 178

Query: 49  RTRNNDRPDRGVWTPL 2
           RTRN DRPDRGVWTPL
Sbjct: 179 RTRNKDRPDRGVWTPL 194


>emb|CBI29694.3| unnamed protein product [Vitis vinifera]
          Length = 519

 Score =  180 bits (457), Expect = 1e-43
 Identities = 104/196 (53%), Positives = 128/196 (65%), Gaps = 4/196 (2%)
 Frame = -2

Query: 577 YVVRDIAKSTIGKDKSTYIMVPKPDDKQFSEKSVSVAASG-TDVLEAENGVSGTTDNXXX 401
           YV+RD AKST  KDKST+I+VPK DD+  S+KSV++AA G  + LE E+GVSG  D    
Sbjct: 213 YVLRDTAKSTSAKDKSTFILVPKRDDQLLSDKSVNLAAGGGAEALEEESGVSGAVDAGKK 272

Query: 400 XXXXXXXXXXXISVPGGLSLKQTTTSRVTNSGGVAVPRQNHRREASGKIIRSILLNKNSR 221
                      IS      L+Q  TS V N  G   P+QN RRE SG+IIRSILLNK++R
Sbjct: 273 KVLLLKGKEREISHH---LLQQNVTSPVKNILGANAPKQNQRREGSGRIIRSILLNKDAR 329

Query: 220 QSLS-VLHSEAQIQTSN--PDKRPSRPSKVQLFLGDANGVSEDRVVANDLHGFCTEKQEK 50
           QS S +  +E Q Q SN   +KRP RP  +QL   + NG  +D+VV ND+H F +EKQ+K
Sbjct: 330 QSQSSMFQTEQQSQASNLEKEKRPPRPPHIQLASKETNGAQDDKVVGNDVHSFVSEKQDK 389

Query: 49  RTRNNDRPDRGVWTPL 2
           RTRN DRPDRGVWTPL
Sbjct: 390 RTRNKDRPDRGVWTPL 405


>ref|XP_002328787.1| predicted protein [Populus trichocarpa] gi|222839085|gb|EEE77436.1|
           predicted protein [Populus trichocarpa]
          Length = 527

 Score =  178 bits (451), Expect = 7e-43
 Identities = 104/195 (53%), Positives = 125/195 (64%), Gaps = 3/195 (1%)
 Frame = -2

Query: 577 YVVRDIAKSTIGKDKSTYIMVPKPDDKQFSEKSVSVAASGTDVLEAENGVSGTTDNXXXX 398
           YV+RD AKST GKDKSTY+ VPK DD+Q S      + SGT VLE E+ VSG TD+    
Sbjct: 213 YVLRDTAKSTSGKDKSTYVHVPKRDDQQLSNAVTLGSGSGTAVLEDESVVSGITDSGKKK 272

Query: 397 XXXXXXXXXXISVPGGLSLKQTTTSRVTNSGGVAVPRQNHRREASGKIIRSILLNKNSRQ 218
                     IS+  G   +Q + S    +   +   ++ RRE SG++IRSILLNK+SR 
Sbjct: 273 ILLLKGKEKEISLVTGTMSQQQSISSSDRNIISSTALKSQRRETSGRMIRSILLNKDSRH 332

Query: 217 SLSV-LHSEAQIQTSN--PDKRPSRPSKVQLFLGDANGVSEDRVVANDLHGFCTEKQEKR 47
             S  +HSE Q+QTSN   +KRP RP   QL L DANG  +D+VV NDLHGF  EKQEKR
Sbjct: 333 IRSSGVHSEPQMQTSNLEKEKRPPRPPHAQLGLKDANGTPDDKVVGNDLHGFPNEKQEKR 392

Query: 46  TRNNDRPDRGVWTPL 2
           TRN DRPDRGVWTPL
Sbjct: 393 TRNKDRPDRGVWTPL 407


>ref|XP_002526435.1| conserved hypothetical protein [Ricinus communis]
           gi|223534215|gb|EEF35930.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 472

 Score =  172 bits (437), Expect = 3e-41
 Identities = 107/196 (54%), Positives = 130/196 (66%), Gaps = 4/196 (2%)
 Frame = -2

Query: 577 YVVRDIAKSTIGKDKSTYIMVPKPDDKQFSEKSVSVA-ASGTDVLEAENGVSGTTDNXXX 401
           YV+RD AKST GKDKSTY++VPK DD+QFS+KS   A ASGT+VLE E+ +         
Sbjct: 177 YVLRDSAKSTSGKDKSTYLLVPKRDDQQFSDKSTPFASASGTEVLEDESEL--------- 227

Query: 400 XXXXXXXXXXXISVPGGLSLKQTTTSRVTNSGGVAVPRQNHRREASGKIIRSILLNKNSR 221
                      + + GG+S KQ   S   N    A+ +Q+ RRE+SG+IIRSILLNK+SR
Sbjct: 228 ----YHLCLLIVQLSGGMS-KQNAASFDKNVTSSAI-KQSQRRESSGRIIRSILLNKDSR 281

Query: 220 QSLSV-LHSEAQIQTSN--PDKRPSRPSKVQLFLGDANGVSEDRVVANDLHGFCTEKQEK 50
           Q+ S    SE QIQ+SN   +KR  RP+ VQL L D NG S+D+ V NDLHGF  EKQEK
Sbjct: 282 QNQSSGFQSEQQIQSSNLEKEKRLPRPAHVQLVLKDVNGSSDDKFVGNDLHGFSGEKQEK 341

Query: 49  RTRNNDRPDRGVWTPL 2
           RTRN DRPDR VWTPL
Sbjct: 342 RTRNKDRPDRVVWTPL 357


>emb|CAN60293.1| hypothetical protein VITISV_023400 [Vitis vinifera]
          Length = 304

 Score =  131 bits (329), Expect = 9e-29
 Identities = 68/117 (58%), Positives = 83/117 (70%), Gaps = 3/117 (2%)
 Frame = -2

Query: 343 LKQTTTSRVTNSGGVAVPRQNHRREASGKIIRSILLNKNSRQSLS-VLHSEAQIQTSN-- 173
           L+Q  TS V N  G   P+QN RRE SG+IIRSILLNK++RQS S +  +E Q Q SN  
Sbjct: 34  LQQNVTSPVKNILGANAPKQNQRREGSGRIIRSILLNKDARQSQSSMFQTEQQSQASNLE 93

Query: 172 PDKRPSRPSKVQLFLGDANGVSEDRVVANDLHGFCTEKQEKRTRNNDRPDRGVWTPL 2
            +KRP RP  +QL   + NG  +D+VV ND+H F +EKQ+KRTRN DRPDRGVWTPL
Sbjct: 94  KEKRPPRPPHIQLASKETNGAQDDKVVGNDVHSFVSEKQDKRTRNKDRPDRGVWTPL 150


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