BLASTX nr result

ID: Panax21_contig00020559 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00020559
         (890 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26997.3| unnamed protein product [Vitis vinifera]              278   2e-72
ref|XP_002283623.1| PREDICTED: zinc finger protein 6 [Vitis vini...   278   2e-72
ref|XP_002527000.1| zinc finger protein, putative [Ricinus commu...   224   3e-56
ref|XP_002312409.1| predicted protein [Populus trichocarpa] gi|2...   216   4e-54
ref|XP_004169000.1| PREDICTED: zinc finger protein 6-like [Cucum...   208   1e-51

>emb|CBI26997.3| unnamed protein product [Vitis vinifera]
          Length = 260

 Score =  278 bits (710), Expect = 2e-72
 Identities = 142/214 (66%), Positives = 160/214 (74%), Gaps = 3/214 (1%)
 Frame = -2

Query: 856 MEELQFHTQPNHNTATNGRLKLFGFNVTEKVIEEVXXXXXXXXXXXXXXGVPNSDGRKYE 677
           M E+ +  +   +  TNGRLK+FGFNV+E   +E               G P +  RKYE
Sbjct: 40  MAEIDYQAKAT-SAPTNGRLKIFGFNVSE---DEDVESSKTPSGSPESGGFPATGDRKYE 95

Query: 676 CQYCCREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAVSYIRNPMVSAFSPPPHLLS 497
           CQYCCREFANSQALGGHQNAHKKERQQLKRAQ+QA+RNAA SYIRNPM+SAF+PPPHLL+
Sbjct: 96  CQYCCREFANSQALGGHQNAHKKERQQLKRAQMQATRNAATSYIRNPMISAFAPPPHLLA 155

Query: 496 PAGPMILPSAAGAASPSWVYVPRTAPPFQVSHGCVFPSSSVGRGVGTLSYAGGVAESTLT 317
           PAGP+++P+ A   S SWVYVPR  PPF VSHGCVFPSSS GRG  TLSYAGGV ESTLT
Sbjct: 156 PAGPVVVPAGAAPQSASWVYVPRGPPPFHVSHGCVFPSSS-GRGAATLSYAGGVGESTLT 214

Query: 316 SVGPQ---QGRVDGPSLSRFSRADSGPCFDDAFG 224
           +  PQ    GRVD PSLSRFSR D GP FDDAFG
Sbjct: 215 TSAPQSRAHGRVDAPSLSRFSRGDGGPTFDDAFG 248


>ref|XP_002283623.1| PREDICTED: zinc finger protein 6 [Vitis vinifera]
           gi|147769067|emb|CAN72502.1| hypothetical protein
           VITISV_027276 [Vitis vinifera]
          Length = 221

 Score =  278 bits (710), Expect = 2e-72
 Identities = 142/214 (66%), Positives = 160/214 (74%), Gaps = 3/214 (1%)
 Frame = -2

Query: 856 MEELQFHTQPNHNTATNGRLKLFGFNVTEKVIEEVXXXXXXXXXXXXXXGVPNSDGRKYE 677
           M E+ +  +   +  TNGRLK+FGFNV+E   +E               G P +  RKYE
Sbjct: 1   MAEIDYQAKAT-SAPTNGRLKIFGFNVSE---DEDVESSKTPSGSPESGGFPATGDRKYE 56

Query: 676 CQYCCREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAVSYIRNPMVSAFSPPPHLLS 497
           CQYCCREFANSQALGGHQNAHKKERQQLKRAQ+QA+RNAA SYIRNPM+SAF+PPPHLL+
Sbjct: 57  CQYCCREFANSQALGGHQNAHKKERQQLKRAQMQATRNAATSYIRNPMISAFAPPPHLLA 116

Query: 496 PAGPMILPSAAGAASPSWVYVPRTAPPFQVSHGCVFPSSSVGRGVGTLSYAGGVAESTLT 317
           PAGP+++P+ A   S SWVYVPR  PPF VSHGCVFPSSS GRG  TLSYAGGV ESTLT
Sbjct: 117 PAGPVVVPAGAAPQSASWVYVPRGPPPFHVSHGCVFPSSS-GRGAATLSYAGGVGESTLT 175

Query: 316 SVGPQ---QGRVDGPSLSRFSRADSGPCFDDAFG 224
           +  PQ    GRVD PSLSRFSR D GP FDDAFG
Sbjct: 176 TSAPQSRAHGRVDAPSLSRFSRGDGGPTFDDAFG 209


>ref|XP_002527000.1| zinc finger protein, putative [Ricinus communis]
           gi|223533635|gb|EEF35372.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 247

 Score =  224 bits (570), Expect = 3e-56
 Identities = 127/242 (52%), Positives = 150/242 (61%), Gaps = 31/242 (12%)
 Frame = -2

Query: 856 MEELQFHTQPNHNTATNGRLKLFGFNVTEKVIEEVXXXXXXXXXXXXXXG---VPNSDGR 686
           MEEL + T+PN  T    RLKLFGF+V++   +++                        R
Sbjct: 1   MEELDYQTKPNSTTT---RLKLFGFSVSDDDQDQLLTPIDSSIKSSSSTSPEAASTDSNR 57

Query: 685 KYECQYCCREFANSQALGGHQNAHKKERQQLKRAQLQASRN-----AAVSYIRNPMVSAF 521
           KYECQYCCREFANSQALGGHQNAHKKERQQLKRAQ+QA+RN     AAVS+ RNPM+SAF
Sbjct: 58  KYECQYCCREFANSQALGGHQNAHKKERQQLKRAQMQATRNAAAAAAAVSFGRNPMISAF 117

Query: 520 SPPPHLLSPAGPMILPSAAGAASPSWVYVPRTAPPFQVSHGCVFPSSSVGRG-------- 365
           +PPPHLL+P GP++LP+AA     SWVY+PR APPF V+HGCVFP+   G G        
Sbjct: 118 APPPHLLAPPGPVVLPAAAS----SWVYLPRPAPPFHVTHGCVFPTGPAGGGASGVAGGF 173

Query: 364 ----VGTLSYAGGVAESTLTSVGPQQ-------GRVDG----PSLSRFSRADSGPCFDDA 230
               VG L Y+GG       S GPQQ       GR DG     SLSRFS+ D GP FD+A
Sbjct: 174 GGKSVGGLPYSGGAVGDMGFSNGPQQAQSRVHNGRPDGLHGPTSLSRFSKGDGGPSFDEA 233

Query: 229 FG 224
            G
Sbjct: 234 LG 235


>ref|XP_002312409.1| predicted protein [Populus trichocarpa] gi|222852229|gb|EEE89776.1|
           predicted protein [Populus trichocarpa]
          Length = 245

 Score =  216 bits (551), Expect = 4e-54
 Identities = 129/237 (54%), Positives = 153/237 (64%), Gaps = 29/237 (12%)
 Frame = -2

Query: 856 MEELQFHTQPNHNTATNGRLKLFGFNVTEKVIEEVXXXXXXXXXXXXXXGVPNS------ 695
           M EL + T+ N +T T+ RLKLFGFNV+E   EE+                P+S      
Sbjct: 1   MAELDYETKHN-STTTSTRLKLFGFNVSED--EELIATTYSSSLKSSSCNTPDSSSFGTA 57

Query: 694 ----DGRKYECQYCCREFANSQALGGHQNAHKKERQQLKRAQLQASRN---AAVSYIRNP 536
               D RKYECQYC REFANSQALGGHQNAHKKERQQLKRAQ+QA+RN   AAVS+ RNP
Sbjct: 58  TATGDSRKYECQYCSREFANSQALGGHQNAHKKERQQLKRAQMQATRNAAAAAVSFGRNP 117

Query: 535 MVSAFSPPPHLLS-PAGPMILPSAAGAASPSWVYVPRTAPPFQVSHGCVFPSSSVGRGVG 359
           M+SAF+PPPHLL+  AG +++P     AS SWVY+PR APPF VSHG VFP    GRGVG
Sbjct: 118 MISAFAPPPHLLAQAAGQVVVPE----ASQSWVYLPRAAPPFHVSHGSVFPRGVGGRGVG 173

Query: 358 TLSYAGGVAESTLTS--VGPQQ------------GRVDGP-SLSRFSRADSGPCFDD 233
           +L+Y G V +  L S   GP Q            G ++GP SLSRFS++D GP FDD
Sbjct: 174 SLTYGGSVGDFGLASSASGPYQQVQSRAHISRVIGDLNGPTSLSRFSKSDGGPSFDD 230


>ref|XP_004169000.1| PREDICTED: zinc finger protein 6-like [Cucumis sativus]
          Length = 229

 Score =  208 bits (530), Expect = 1e-51
 Identities = 115/215 (53%), Positives = 139/215 (64%), Gaps = 12/215 (5%)
 Frame = -2

Query: 832 QPNHNTATNGRLKLFGFNVTEKVIEEVXXXXXXXXXXXXXXGVPNSDGRKYECQYCCREF 653
           Q   N+ T  +LKLFGF+V E  +E+                   S  RKYECQYCCREF
Sbjct: 6   QTKSNSTTPFKLKLFGFDVREDQLEDDDSAAKTPTGSSESGVFTPSTDRKYECQYCCREF 65

Query: 652 ANSQALGGHQNAHKKERQQLKRAQLQASRNAAVSYIRNPMVSAFSPPPHLLS-------- 497
           ANSQALGGHQNAHKKERQQLKRAQLQA+RNAAV+Y+RNP++SAF+PPPHLL+        
Sbjct: 66  ANSQALGGHQNAHKKERQQLKRAQLQATRNAAVAYVRNPIISAFAPPPHLLATTAAAAAP 125

Query: 496 PAGPMILPSAAGA-ASPSWVYVPRTAPP--FQVSHGCVFPSSSVGRGVGTLS-YAGGVAE 329
           P G  +LP+ A A  S SWVY+PRT PP     SHGCVFP++  G     LS Y GGV  
Sbjct: 126 PGGQFLLPNPATAGTSSSWVYMPRTQPPTIHVSSHGCVFPTAGGGGTSAMLSAYGGGVGN 185

Query: 328 STLTSVGPQQGRVDGPSLSRFSRADSGPCFDDAFG 224
           S   ++GPQ   V+G SL RFS+ ++G  FD+  G
Sbjct: 186 SMAFTMGPQ---VEGVSLKRFSKGENGSGFDEGIG 217


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