BLASTX nr result

ID: Panax21_contig00020556 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00020556
         (649 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFQ94050.1| auxin response factor 1 [Camellia sinensis]            221   9e-56
ref|XP_002266678.2| PREDICTED: auxin response factor 8-like [Vit...   213   2e-53
ref|NP_001234783.1| auxin response factor 8 [Solanum lycopersicu...   194   2e-47
gb|ABN10955.2| auxin response factor 8 [Ipomoea nil]                  183   3e-44
gb|AFF60411.1| auxin response factor 8 [Nicotiana tabacum]            178   7e-43

>gb|AFQ94050.1| auxin response factor 1 [Camellia sinensis]
          Length = 820

 Score =  221 bits (563), Expect = 9e-56
 Identities = 128/218 (58%), Positives = 148/218 (67%), Gaps = 2/218 (0%)
 Frame = -1

Query: 649  QQYQAMLAAGLQNSGSGDSLRXXXXXXXXXXXQYLQHPGIGSHNPLLLQQQQVIHQSAPP 470
            QQYQAMLAAGLQN G GDSL+            Y QH G  S NPLL QQ QVI  S   
Sbjct: 436  QQYQAMLAAGLQNIGGGDSLKQQFLQLQQPFQ-YFQHSG--SQNPLL-QQHQVIQPSISS 491

Query: 469  HILHGQTQLLPENLPRPLQQQLNSHSEEQ-HSHAYPESYMIQSDLLQQRQQPNVSS-PFP 296
            HIL  QTQ+LPENLPR +QQQ+N+ SEEQ   H Y + ++IQSD LQQRQQ NV S  F 
Sbjct: 492  HILQAQTQMLPENLPRHMQQQVNNQSEEQPQQHTYQDPFLIQSDQLQQRQQSNVPSHSFS 551

Query: 295  KTDFIDSNCKISASVSPSSIQNMLGSLSSEGSGNILNFCRTGQIMLGEHPPQHSWISKFT 116
            K DF DSN K S SV+P  IQNMLGSLS++GS N+ NF  TGQ M+ E P Q  W+SKFT
Sbjct: 552  KIDFADSNAKFSTSVTPC-IQNMLGSLSTDGSANLFNFSSTGQSMVSE-PSQQPWVSKFT 609

Query: 115  SPQVHTSSASLSLPSYPGKDSALEQESCSLGAHGQALF 2
              QV+ S+ S+SL  YPGKD+A+EQE+CSL     ALF
Sbjct: 610  HSQVNPSANSVSLTPYPGKDTAVEQENCSLDGQNHALF 647


>ref|XP_002266678.2| PREDICTED: auxin response factor 8-like [Vitis vinifera]
          Length = 846

 Score =  213 bits (543), Expect = 2e-53
 Identities = 126/222 (56%), Positives = 150/222 (67%), Gaps = 6/222 (2%)
 Frame = -1

Query: 649  QQYQAMLAAGLQNSGSGDSLRXXXXXXXXXXXQYLQHPGIGSHNPLLLQQQQ--VIHQSA 476
            QQYQAMLAAGLQN GSGD L+            YLQ  G  S+NPLL Q+QQ  VI Q+ 
Sbjct: 437  QQYQAMLAAGLQNLGSGDPLKQQYMQFQQPFQ-YLQQTG--SNNPLLQQRQQPQVIQQTI 493

Query: 475  PPHILHGQTQLLPENLPRPL-QQQLNSHSEE-QHSHAYPESYMIQSDLLQQRQQPNVSS- 305
            P H+ H QTQ+L +NLPR L QQQLN+  E+ Q  H+Y ES+ IQSD LQQR QPNV S 
Sbjct: 494  PQHMSHAQTQILQDNLPRHLLQQQLNNQQEQPQQQHSYQESFQIQSDQLQQRPQPNVPSL 553

Query: 304  PFPKTDFIDSNCKISASVSPSSIQNMLGSLSSEGSGNILNFCRT-GQIMLGEHPPQHSWI 128
             F K DF DSN K S S++PSS+QNMLGS+  EGSGN+LNF RT GQ ML E PPQ  W 
Sbjct: 554  SFSKADFPDSNTKFS-SITPSSMQNMLGSMCPEGSGNLLNFSRTTGQSMLSEQPPQQPWA 612

Query: 127  SKFTSPQVHTSSASLSLPSYPGKDSALEQESCSLGAHGQALF 2
            +KFT  Q +  + S SLP + GKD+A+E E+C+L A    LF
Sbjct: 613  TKFTHSQFNAFANSTSLPPFTGKDAAVEPENCNLDAQNHTLF 654


>ref|NP_001234783.1| auxin response factor 8 [Solanum lycopersicum]
            gi|154550159|gb|ABS83388.1| auxin response factor 8
            [Solanum lycopersicum]
          Length = 844

 Score =  194 bits (492), Expect = 2e-47
 Identities = 113/221 (51%), Positives = 140/221 (63%), Gaps = 5/221 (2%)
 Frame = -1

Query: 649  QQYQAMLAAGLQNSGSGDSLRXXXXXXXXXXXQYLQHPGIGSHNPLL----LQQQQVIHQ 482
            Q YQAMLA GLQ+ GSGD L+            YLQH    + N +L     QQQQ++ Q
Sbjct: 436  QHYQAMLATGLQSFGSGDLLKQQLMQFQQPVQ-YLQHAS--TENSILHQQQQQQQQIMQQ 492

Query: 481  SAPPHILHGQTQLLPENLPRPLQQQLNSHSEEQ-HSHAYPESYMIQSDLLQQRQQPNVSS 305
            +   H+L  QTQ+L ENL R  Q Q N+ SEEQ H H Y E++ +  D LQQRQ  NV+S
Sbjct: 493  AVHQHMLPAQTQMLSENLQRQSQHQSNNQSEEQAHQHTYQEAFQLPHDQLQQRQPSNVTS 552

Query: 304  PFPKTDFIDSNCKISASVSPSSIQNMLGSLSSEGSGNILNFCRTGQIMLGEHPPQHSWIS 125
            PF K DF D   K SASV+PS +QNMLGSL SEGS N LN  RTGQ ++ E  PQ SW+S
Sbjct: 553  PFLKADFADLTSKFSASVAPSGVQNMLGSLCSEGSNNSLNINRTGQSVIIEQSPQQSWMS 612

Query: 124  KFTSPQVHTSSASLSLPSYPGKDSALEQESCSLGAHGQALF 2
            KFT  Q++T S S SLP+Y GKD+   + +CSL +  Q+LF
Sbjct: 613  KFTESQLNTCSNSSSLPTY-GKDTFNPRGNCSLDSQNQSLF 652


>gb|ABN10955.2| auxin response factor 8 [Ipomoea nil]
          Length = 838

 Score =  183 bits (464), Expect = 3e-44
 Identities = 109/220 (49%), Positives = 136/220 (61%), Gaps = 4/220 (1%)
 Frame = -1

Query: 649  QQYQAMLAAGLQNSGSGDSLRXXXXXXXXXXXQYLQHPGIGSHNPLLLQQQQVIHQSAPP 470
            QQYQAMLAAGLQN G+ D  +            YLQ    GSHNPLL QQQQVI Q    
Sbjct: 440  QQYQAMLAAGLQNFGNADLFKQQLMQFQQPAQ-YLQ--ASGSHNPLLQQQQQVIQQPMSS 496

Query: 469  HILHGQTQLLPENLPRPLQQQLNSHSEEQ-HSHAYPESYMIQSDLLQQRQQPNVSSP-FP 296
            H+L  QTQ+L ++L R  QQQ +  +EE    HAY E++ +  D LQQR   N+ SP F 
Sbjct: 497  HMLPAQTQMLSDSLQRHPQQQTSGQTEEPTQQHAYQEAFPVSHDQLQQRPLSNIPSPSFS 556

Query: 295  KTDFIDSNCKISASVSPSSIQNMLGSLSSEGSGNILNFCRTGQIMLGEHPP--QHSWISK 122
            KT+F       +  VSPSS+Q+MLGSL  EGS N+LNF RTGQ  L EH P  Q SW  K
Sbjct: 557  KTNF-------APPVSPSSMQSMLGSLCPEGSSNLLNFKRTGQSALNEHQPQVQQSWSPK 609

Query: 121  FTSPQVHTSSASLSLPSYPGKDSALEQESCSLGAHGQALF 2
            F +  + T S S+S PSYPGK+++ +QE+C+L A  Q+ F
Sbjct: 610  FANSHISTCSNSVSTPSYPGKEASSQQETCALDAQNQSFF 649


>gb|AFF60411.1| auxin response factor 8 [Nicotiana tabacum]
          Length = 843

 Score =  178 bits (452), Expect = 7e-43
 Identities = 112/227 (49%), Positives = 138/227 (60%), Gaps = 11/227 (4%)
 Frame = -1

Query: 649  QQYQAMLAAGLQNSGSGDSLRXXXXXXXXXXXQYLQHPGIGSHNPLL--------LQQQQ 494
            QQYQAMLA GLQN GSGD L+            YLQH G  SHNPLL        +QQQQ
Sbjct: 436  QQYQAMLATGLQNFGSGDMLKQQLMQFQQPVQ-YLQHAG--SHNPLLQQQQQQQAMQQQQ 492

Query: 493  VIHQSAPPHILHGQTQLLPENLPRPLQQQLNSHSEEQ-HSHAYPESYMIQSDLLQQRQQP 317
             IHQ    H+L  QTQ+  +N+ R  QQQ+ +  ++Q H H+Y E+Y I    LQQ+Q  
Sbjct: 493  AIHQ----HMLPAQTQM--DNVQRQPQQQVGNQMDDQAHQHSYQEAYQISHSQLQQKQPS 546

Query: 316  NV-SSPFPKTDFIDSNCKISASVSPSSIQNMLGSLSSEGSGNILNFCRTG-QIMLGEHPP 143
            N+ S  F K DF D N K +AS++PS I   LGSL SEGS N LNF R G Q ++ E PP
Sbjct: 547  NIPSQSFSKPDFADPNSKFAASIAPSVIPMGLGSLCSEGSSNFLNFNRIGQQSVIMEQPP 606

Query: 142  QHSWISKFTSPQVHTSSASLSLPSYPGKDSALEQESCSLGAHGQALF 2
            Q SW+SKF   +++  S S SLP+Y GKD+   QE+CSL A  Q LF
Sbjct: 607  QKSWMSKFGHSELNAGSNSSSLPAY-GKDTPTSQETCSLNAQNQTLF 652


Top