BLASTX nr result

ID: Panax21_contig00020539 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00020539
         (968 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN59788.1| hypothetical protein VITISV_012480 [Vitis vinifera]   193   4e-78
ref|XP_002272351.1| PREDICTED: transmembrane and coiled-coil dom...   193   4e-78
ref|XP_002310840.1| predicted protein [Populus trichocarpa] gi|2...   182   3e-71
ref|XP_002533809.1| conserved hypothetical protein [Ricinus comm...   187   2e-70
ref|XP_003612112.1| Transmembrane and coiled-coil domain-contain...   177   1e-68

>emb|CAN59788.1| hypothetical protein VITISV_012480 [Vitis vinifera]
          Length = 670

 Score =  193 bits (490), Expect(2) = 4e-78
 Identities = 108/183 (59%), Positives = 126/183 (68%), Gaps = 1/183 (0%)
 Frame = +1

Query: 157 MSVMLTPTHRYAAGALFGLAVHQAQIHQTNPLGSFPDEDSNHEERIXXXXXXXXXXXXPQ 336
           MS  LTPT RYAAGAL GLA+ QAQIHQT PLGS  +ED    ERI            PQ
Sbjct: 1   MSSFLTPTQRYAAGALLGLALQQAQIHQTRPLGSSIEED----ERISSGSSSDSVSEDPQ 56

Query: 337 LWVHESSDLLRPIFRFLDIEENAWHGLVETAGTSSANHHVGAFLRLLAEESGDTSTDMKD 516
           LWVHE+S LLRP+F+ L IE  AW GL ETAG+S A HHVGAFLRL++EES ++S DMKD
Sbjct: 57  LWVHENSGLLRPVFKSLKIENKAWTGLEETAGSSPAKHHVGAFLRLISEESAESSADMKD 116

Query: 517 QELALSKAVDAMASSIGNSVDFE-SKKEKHREYVHECREKFSTAQIQSQSEVELNGLEDQ 693
            ELALSKAVD M  S+  + +   SKKEKHREY ++CREK S A +Q  SEV    L+ Q
Sbjct: 117 AELALSKAVDVMELSMETTSETSMSKKEKHREYENKCREKCSPADMQPNSEVVDVPLQAQ 176

Query: 694 QDK 702
           + K
Sbjct: 177 ELK 179



 Score =  125 bits (315), Expect(2) = 4e-78
 Identities = 59/81 (72%), Positives = 69/81 (85%)
 Frame = +2

Query: 722 EAPIGSGSKFDEKPFEEVSMLGYQRKVTVLYELLSACLAITPEHNKKTTRRKKGYDAQHR 901
           + P GS SKFDEKP EEV+ML Y RKVTVLYELLSACL  TPE NKK+TR++KGYDA+HR
Sbjct: 188 QTPYGSSSKFDEKPVEEVAMLNYPRKVTVLYELLSACLTDTPEDNKKSTRKRKGYDARHR 247

Query: 902 VALRLLATWFNFKWIKMEAIE 964
           VALRLLATW + +W K+EA+E
Sbjct: 248 VALRLLATWLDIQWKKVEAME 268


>ref|XP_002272351.1| PREDICTED: transmembrane and coiled-coil domain-containing protein
           4 [Vitis vinifera] gi|297735050|emb|CBI17412.3| unnamed
           protein product [Vitis vinifera]
          Length = 662

 Score =  193 bits (490), Expect(2) = 4e-78
 Identities = 108/183 (59%), Positives = 126/183 (68%), Gaps = 1/183 (0%)
 Frame = +1

Query: 157 MSVMLTPTHRYAAGALFGLAVHQAQIHQTNPLGSFPDEDSNHEERIXXXXXXXXXXXXPQ 336
           MS  LTPT RYAAGAL GLA+ QAQIHQT PLGS  +ED    ERI            PQ
Sbjct: 1   MSSFLTPTQRYAAGALLGLALQQAQIHQTRPLGSSIEED----ERISSGSSSDSVSEDPQ 56

Query: 337 LWVHESSDLLRPIFRFLDIEENAWHGLVETAGTSSANHHVGAFLRLLAEESGDTSTDMKD 516
           LWVHE+S LLRP+F+ L IE  AW GL ETAG+S A HHVGAFLRL++EES ++S DMKD
Sbjct: 57  LWVHENSGLLRPVFKSLKIENKAWTGLEETAGSSPAKHHVGAFLRLISEESAESSADMKD 116

Query: 517 QELALSKAVDAMASSIGNSVDFE-SKKEKHREYVHECREKFSTAQIQSQSEVELNGLEDQ 693
            ELALSKAVD M  S+  + +   SKKEKHREY ++CREK S A +Q  SEV    L+ Q
Sbjct: 117 AELALSKAVDVMELSMETTSETSMSKKEKHREYENKCREKCSPADMQPNSEVVDVPLQAQ 176

Query: 694 QDK 702
           + K
Sbjct: 177 ELK 179



 Score =  125 bits (315), Expect(2) = 4e-78
 Identities = 59/81 (72%), Positives = 69/81 (85%)
 Frame = +2

Query: 722 EAPIGSGSKFDEKPFEEVSMLGYQRKVTVLYELLSACLAITPEHNKKTTRRKKGYDAQHR 901
           + P GS SKFDEKP EEV+ML Y RKVTVLYELLSACL  TPE NKK+TR++KGYDA+HR
Sbjct: 188 QTPYGSSSKFDEKPVEEVAMLNYPRKVTVLYELLSACLTDTPEDNKKSTRKRKGYDARHR 247

Query: 902 VALRLLATWFNFKWIKMEAIE 964
           VALRLLATW + +W K+EA+E
Sbjct: 248 VALRLLATWLDIQWKKVEAME 268


>ref|XP_002310840.1| predicted protein [Populus trichocarpa] gi|222853743|gb|EEE91290.1|
           predicted protein [Populus trichocarpa]
          Length = 681

 Score =  182 bits (462), Expect(2) = 3e-71
 Identities = 103/188 (54%), Positives = 126/188 (67%), Gaps = 11/188 (5%)
 Frame = +1

Query: 169 LTPTHRYAAGALFGLAVHQAQIHQTNPLGSFPDEDSNHEERIXXXXXXXXXXXX------ 330
           L+ T RYAAGALF +A+HQAQIHQT PLG F D DS  EER                   
Sbjct: 13  LSRTQRYAAGALFAIALHQAQIHQTRPLGLFHD-DSEQEERTSCSSSHSNGSSSDSVSED 71

Query: 331 PQLWVHESSDLLRPIFRFLDIEENAWHGLVETAGTSSANHHVGAFLRLLAEESGD---TS 501
           P LW+HE+S LLRP+FRFL++E  AW GL ETAG S A HHVGAFLRLL+EESGD   +S
Sbjct: 72  PDLWIHENSGLLRPVFRFLEVESVAWTGLEETAGGSPAKHHVGAFLRLLSEESGDASSSS 131

Query: 502 TDMKDQELALSKAVDAMASSIG-NSVDFESKKEKHREYVHECREKFST-AQIQSQSEVEL 675
           +   DQE ALSKAVD M  ++G N V  +SKKEKH+EY  +CREK S  ++++S SEVE 
Sbjct: 132 SQSSDQEFALSKAVDVMEETMGANPVSSQSKKEKHKEYETQCREKLSAGSEVKSTSEVEN 191

Query: 676 NGLEDQQD 699
           +  +  +D
Sbjct: 192 DSPKTAKD 199



 Score =  113 bits (283), Expect(2) = 3e-71
 Identities = 57/93 (61%), Positives = 66/93 (70%)
 Frame = +2

Query: 686 KISRTKKDAPSREAPIGSGSKFDEKPFEEVSMLGYQRKVTVLYELLSACLAITPEHNKKT 865
           K ++    A   +AP  SG   DE+P EE  ML  QRKVTVLYE+LSACLA   E NKK 
Sbjct: 195 KTAKDDHSADVSDAPRDSGHNVDEEPVEEEKMLSNQRKVTVLYEILSACLADRREENKKC 254

Query: 866 TRRKKGYDAQHRVALRLLATWFNFKWIKMEAIE 964
           TR++ GYDA+HRVALRLLATW + KW KMEAIE
Sbjct: 255 TRKRNGYDARHRVALRLLATWLDIKWTKMEAIE 287


>ref|XP_002533809.1| conserved hypothetical protein [Ricinus communis]
           gi|223526263|gb|EEF28578.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 713

 Score =  187 bits (474), Expect(2) = 2e-70
 Identities = 99/192 (51%), Positives = 125/192 (65%), Gaps = 11/192 (5%)
 Frame = +1

Query: 169 LTPTHRYAAGALFGLAVHQAQIHQTNPLGSFPDEDSNHEER------IXXXXXXXXXXXX 330
           L+PT RYAAGALF +A+HQAQ HQT PLG  PD D    ++                   
Sbjct: 25  LSPTQRYAAGALFAIALHQAQTHQTRPLGFSPDVDPTEPQQQGDRTSCSSSNSSDSVSED 84

Query: 331 PQLWVHESSDLLRPIFRFLDIEENAWHGLVETAGTSSANHHVGAFLRLLAEESGD----T 498
           P LWVHE+  LLRP+FRFL+I+ NAWHGL ETAG+S A +HVGAFLRLLAE + D    +
Sbjct: 85  PDLWVHETLGLLRPVFRFLEIDSNAWHGLEETAGSSPAKYHVGAFLRLLAENNDDDNASS 144

Query: 499 STDMKDQELALSKAVDAMASSIGN-SVDFESKKEKHREYVHECREKFSTAQIQSQSEVEL 675
           S    DQELALSKAVD M+ ++   +V F+SKKEKH+EY +ECREK S  ++QS +E   
Sbjct: 145 SQSSSDQELALSKAVDVMSQNMETATVSFQSKKEKHKEYEYECREKLSNNEVQSDNEAAK 204

Query: 676 NGLEDQQDKKRR 711
             LE  Q+ + +
Sbjct: 205 ELLETAQESREK 216



 Score =  106 bits (264), Expect(2) = 2e-70
 Identities = 54/84 (64%), Positives = 63/84 (75%), Gaps = 1/84 (1%)
 Frame = +2

Query: 719 REAPIGSGSKFDEKPFEEVSMLGYQRKVTVLYELLSACLAITPE-HNKKTTRRKKGYDAQ 895
           R+  +   S  DEKP EE  ML Y RK+ VLYE+LS CLA   E +NKK TRR+KGYDA+
Sbjct: 239 RDGVLVGVSGVDEKPIEEEKMLSYPRKIAVLYEILSGCLADKREDNNKKYTRRRKGYDAR 298

Query: 896 HRVALRLLATWFNFKWIKMEAIET 967
           HRVALRLLATW + KWI+MEAIET
Sbjct: 299 HRVALRLLATWLDIKWIQMEAIET 322


>ref|XP_003612112.1| Transmembrane and coiled-coil domain-containing protein [Medicago
           truncatula] gi|355513447|gb|AES95070.1| Transmembrane
           and coiled-coil domain-containing protein [Medicago
           truncatula]
          Length = 717

 Score =  177 bits (449), Expect(2) = 1e-68
 Identities = 100/183 (54%), Positives = 119/183 (65%), Gaps = 5/183 (2%)
 Frame = +1

Query: 169 LTPTHRYAAGALFGLAVHQAQIHQTNPLG----SFPDEDSNHEERIXXXXXXXXXXXXPQ 336
           LTPT RYAAGALFGLA+HQAQ+HQT+PLG     FP   S+                 P 
Sbjct: 16  LTPTQRYAAGALFGLALHQAQLHQTHPLGLSTDDFPSPSSSTST--------GAVFEDPD 67

Query: 337 LWVHESSDLLRPIFRFLDIEENAWHGLVETAGTSSANHHVGAFLRLLAEESGDTSTDMKD 516
           LWVH +S LLRP+F FLDI+  AW GL ET+G+S A  HVG FLRLL+EE  D +    D
Sbjct: 68  LWVHHTSGLLRPVFIFLDIDSAAWSGLEETSGSSVATRHVGPFLRLLSEEYDDDNAKRLD 127

Query: 517 QELALSKAVDAMASSI-GNSVDFESKKEKHREYVHECREKFSTAQIQSQSEVELNGLEDQ 693
           QELALS+AVDA+  S+  NS    SK++K REY HECREKFSTA +Q  SE     LE Q
Sbjct: 128 QELALSEAVDALVLSLEKNSESSRSKRKKLREYEHECREKFSTADVQPNSEKVDMHLETQ 187

Query: 694 QDK 702
           Q++
Sbjct: 188 QEE 190



 Score =  109 bits (273), Expect(2) = 1e-68
 Identities = 53/76 (69%), Positives = 61/76 (80%)
 Frame = +2

Query: 737 SGSKFDEKPFEEVSMLGYQRKVTVLYELLSACLAITPEHNKKTTRRKKGYDAQHRVALRL 916
           S SK DE P EE+ ML YQRKVTVLY+LL+ACL+   E N K TRR+KGYDA+HRVALRL
Sbjct: 206 SNSKTDEGPVEELMMLSYQRKVTVLYQLLAACLSDIGEKNTKYTRRRKGYDARHRVALRL 265

Query: 917 LATWFNFKWIKMEAIE 964
           LATW + KW KMEA+E
Sbjct: 266 LATWLDIKWTKMEAVE 281