BLASTX nr result

ID: Panax21_contig00020524 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00020524
         (1029 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAL16409.1| pathogenesis-related protein PR10a [Nicotiana tab...    55   7e-15
ref|XP_002516990.1| Major allergen Pru av, putative [Ricinus com...    53   7e-14
ref|XP_003631944.1| PREDICTED: LOW QUALITY PROTEIN: major allerg...    53   8e-13
emb|CAN67367.1| hypothetical protein VITISV_007417 [Vitis vinifera]    53   3e-12
ref|XP_002273982.1| PREDICTED: major allergen Pru ar 1 [Vitis vi...    54   4e-12

>gb|AAL16409.1| pathogenesis-related protein PR10a [Nicotiana tabacum]
          Length = 102

 Score = 54.7 bits (130), Expect(2) = 7e-15
 Identities = 27/38 (71%), Positives = 30/38 (78%)
 Frame = -3

Query: 346 SISKVTSKYYTDGDFMLKEEDIKAGKERALGMYKDVEA 233
           SISKVTS YYT GDF L EE+IKAGKE+   M+K VEA
Sbjct: 55  SISKVTSTYYTVGDFKLNEEEIKAGKEKVSAMFKVVEA 92



 Score = 52.8 bits (125), Expect(2) = 7e-15
 Identities = 25/48 (52%), Positives = 35/48 (72%), Gaps = 2/48 (4%)
 Frame = -2

Query: 485 IGSNFYTVKYHIDMLSEEKYTY--TLMEGDALIEKLEIITYEVKFKPS 348
           IG  F ++KY +D L+EE YTY  TL+ GD L++ LE I+Y+VKF+ S
Sbjct: 3   IGGKFKSIKYRVDELNEETYTYKYTLVGGDGLVDNLEKISYDVKFEQS 50


>ref|XP_002516990.1| Major allergen Pru av, putative [Ricinus communis]
           gi|223544078|gb|EEF45604.1| Major allergen Pru av,
           putative [Ricinus communis]
          Length = 158

 Score = 53.1 bits (126), Expect(2) = 7e-14
 Identities = 25/37 (67%), Positives = 29/37 (78%)
 Frame = -3

Query: 343 ISKVTSKYYTDGDFMLKEEDIKAGKERALGMYKDVEA 233
           I K TSKYYT GD  LKEE+I AGKE+A GM+K +EA
Sbjct: 114 ICKGTSKYYTKGDIELKEEEINAGKEKARGMFKGIEA 150



 Score = 50.8 bits (120), Expect(2) = 7e-14
 Identities = 25/47 (53%), Positives = 35/47 (74%), Gaps = 2/47 (4%)
 Frame = -2

Query: 482 GSNFYTVKYHIDMLSEEKYTY--TLMEGDALIEKLEIITYEVKFKPS 348
           GS F  VK+ ID+L +E +TY  T++EGDAL++ LE I+YE KF P+
Sbjct: 62  GSQFKYVKHKIDVLDKESFTYGYTIIEGDALMDTLEKISYETKFVPA 108


>ref|XP_003631944.1| PREDICTED: LOW QUALITY PROTEIN: major allergen Pru ar 1-like [Vitis
           vinifera]
          Length = 159

 Score = 52.8 bits (125), Expect(2) = 8e-13
 Identities = 24/38 (63%), Positives = 31/38 (81%)
 Frame = -3

Query: 346 SISKVTSKYYTDGDFMLKEEDIKAGKERALGMYKDVEA 233
           SI K TSKY+T GDF + E+ IKAGKE+A+G++K VEA
Sbjct: 113 SICKSTSKYHTKGDFEITEDQIKAGKEKAMGLFKAVEA 150



 Score = 47.8 bits (112), Expect(2) = 8e-13
 Identities = 29/68 (42%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
 Frame = -2

Query: 545 CVSTISGSYGELQS*RF*MLIGSNFYTVKYHIDMLSEEKYTYT--LMEGDALIEKLEIIT 372
           CV  I G  G     +     GS F  VK+ +D + +E +TYT  ++EGDAL+  LE I+
Sbjct: 41  CVEIIEGDGGAGIIKKVTFGEGSQFNYVKHRVDGIDKENFTYTYSVIEGDALMGTLESIS 100

Query: 371 YEVKFKPS 348
           YEVK  PS
Sbjct: 101 YEVKLVPS 108


>emb|CAN67367.1| hypothetical protein VITISV_007417 [Vitis vinifera]
          Length = 159

 Score = 52.8 bits (125), Expect(2) = 3e-12
 Identities = 24/38 (63%), Positives = 31/38 (81%)
 Frame = -3

Query: 346 SISKVTSKYYTDGDFMLKEEDIKAGKERALGMYKDVEA 233
           SI K TSKY+T GDF + E+ IKAGKE+A+G++K VEA
Sbjct: 113 SICKSTSKYHTKGDFEITEDQIKAGKEKAMGLFKAVEA 150



 Score = 45.8 bits (107), Expect(2) = 3e-12
 Identities = 28/68 (41%), Positives = 38/68 (55%), Gaps = 2/68 (2%)
 Frame = -2

Query: 545 CVSTISGSYGELQS*RF*MLIGSNFYTVKYHIDMLSEEKYTYT--LMEGDALIEKLEIIT 372
           CV  I G  G     +     GS F  VK+ +D + +E +TY+  L+EGDAL+  LE I+
Sbjct: 41  CVEIIEGDGGPGSIKKITFGEGSQFNYVKHRVDGIDKENFTYSYSLIEGDALMGTLESIS 100

Query: 371 YEVKFKPS 348
           YEVK   S
Sbjct: 101 YEVKLVAS 108


>ref|XP_002273982.1| PREDICTED: major allergen Pru ar 1 [Vitis vinifera]
           gi|296083303|emb|CBI22939.3| unnamed protein product
           [Vitis vinifera]
          Length = 159

 Score = 53.5 bits (127), Expect(2) = 4e-12
 Identities = 25/38 (65%), Positives = 31/38 (81%)
 Frame = -3

Query: 346 SISKVTSKYYTDGDFMLKEEDIKAGKERALGMYKDVEA 233
           SI K TSKY+T GDF + E+ IKAGKE+ALG++K VEA
Sbjct: 113 SICKSTSKYHTKGDFEITEDQIKAGKEKALGLFKAVEA 150



 Score = 44.7 bits (104), Expect(2) = 4e-12
 Identities = 27/68 (39%), Positives = 38/68 (55%), Gaps = 2/68 (2%)
 Frame = -2

Query: 545 CVSTISGSYGELQS*RF*MLIGSNFYTVKYHIDMLSEEKYTYT--LMEGDALIEKLEIIT 372
           CV  I G  G     +     GS F  VK+ +D + +E +TY+  ++EGDAL+  LE I+
Sbjct: 41  CVEIIEGDGGPGSIKKITFGEGSQFNYVKHRVDGIDKENFTYSYSVIEGDALMGTLESIS 100

Query: 371 YEVKFKPS 348
           YEVK   S
Sbjct: 101 YEVKLVAS 108


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