BLASTX nr result

ID: Panax21_contig00020518 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00020518
         (604 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_567283.1| NAD(P)H dehydrogenase B2 [Arabidopsis thaliana]...   136   2e-30
gb|AAD48975.1|AF162444_7 contains similarity to Pfam family PF00...   136   2e-30
ref|NP_001190678.1| NAD(P)H dehydrogenase B2 [Arabidopsis thalia...   136   2e-30
ref|XP_002872730.1| hypothetical protein ARALYDRAFT_911770 [Arab...   136   3e-30
ref|XP_002305652.1| predicted protein [Populus trichocarpa] gi|2...   125   6e-27

>ref|NP_567283.1| NAD(P)H dehydrogenase B2 [Arabidopsis thaliana]
           gi|75332084|sp|Q94BV7.1|NDB2_ARATH RecName: Full=NAD(P)H
           dehydrogenase B2, mitochondrial; Flags: Precursor
           gi|14532464|gb|AAK63960.1| AT4g05020/T32N4_4
           [Arabidopsis thaliana] gi|25090208|gb|AAN72252.1|
           At4g05020/T32N4_4 [Arabidopsis thaliana]
           gi|332657060|gb|AEE82460.1| NAD(P)H dehydrogenase B2
           [Arabidopsis thaliana]
          Length = 582

 Score =  136 bits (343), Expect = 2e-30
 Identities = 67/111 (60%), Positives = 82/111 (73%)
 Frame = +3

Query: 270 MRSLTIYERFFKTFRDNPXXXXXXXXXXXXXXXXXAYSEASSSNGANIVASSEAGDRKKR 449
           MR+ +++ERF K F+D+P                 AYSEA++S GAN  A  E G +KK+
Sbjct: 1   MRNFSVFERFSKAFKDHPSLTRILVVSTISGGGLIAYSEANASYGANGGAVVETGTKKKK 60

Query: 450 VVVLGTGWAGTSFMKNLKDSSYDVQVISPRNYFAFTPLLPSVTCGTVEARS 602
           VV+LGTGWAGTSF+KNL +S Y+VQ+ISPRNYFAFTPLLPSVTCGTVEARS
Sbjct: 61  VVLLGTGWAGTSFLKNLNNSQYEVQIISPRNYFAFTPLLPSVTCGTVEARS 111


>gb|AAD48975.1|AF162444_7 contains similarity to Pfam family PF00070 - Pyridine
           nucleotide-disulphide oxidoreductase class-I;
           score=26.1, E=0.0008, N=1 [Arabidopsis thaliana]
           gi|7267261|emb|CAB81044.1| AT4g05020 [Arabidopsis
           thaliana]
          Length = 583

 Score =  136 bits (343), Expect = 2e-30
 Identities = 67/111 (60%), Positives = 82/111 (73%)
 Frame = +3

Query: 270 MRSLTIYERFFKTFRDNPXXXXXXXXXXXXXXXXXAYSEASSSNGANIVASSEAGDRKKR 449
           MR+ +++ERF K F+D+P                 AYSEA++S GAN  A  E G +KK+
Sbjct: 1   MRNFSVFERFSKAFKDHPSLTRILVVSTISGGGLIAYSEANASYGANGGAVVETGTKKKK 60

Query: 450 VVVLGTGWAGTSFMKNLKDSSYDVQVISPRNYFAFTPLLPSVTCGTVEARS 602
           VV+LGTGWAGTSF+KNL +S Y+VQ+ISPRNYFAFTPLLPSVTCGTVEARS
Sbjct: 61  VVLLGTGWAGTSFLKNLNNSQYEVQIISPRNYFAFTPLLPSVTCGTVEARS 111


>ref|NP_001190678.1| NAD(P)H dehydrogenase B2 [Arabidopsis thaliana]
           gi|332657061|gb|AEE82461.1| NAD(P)H dehydrogenase B2
           [Arabidopsis thaliana]
          Length = 619

 Score =  136 bits (343), Expect = 2e-30
 Identities = 67/111 (60%), Positives = 82/111 (73%)
 Frame = +3

Query: 270 MRSLTIYERFFKTFRDNPXXXXXXXXXXXXXXXXXAYSEASSSNGANIVASSEAGDRKKR 449
           MR+ +++ERF K F+D+P                 AYSEA++S GAN  A  E G +KK+
Sbjct: 1   MRNFSVFERFSKAFKDHPSLTRILVVSTISGGGLIAYSEANASYGANGGAVVETGTKKKK 60

Query: 450 VVVLGTGWAGTSFMKNLKDSSYDVQVISPRNYFAFTPLLPSVTCGTVEARS 602
           VV+LGTGWAGTSF+KNL +S Y+VQ+ISPRNYFAFTPLLPSVTCGTVEARS
Sbjct: 61  VVLLGTGWAGTSFLKNLNNSQYEVQIISPRNYFAFTPLLPSVTCGTVEARS 111


>ref|XP_002872730.1| hypothetical protein ARALYDRAFT_911770 [Arabidopsis lyrata subsp.
           lyrata] gi|297318567|gb|EFH48989.1| hypothetical protein
           ARALYDRAFT_911770 [Arabidopsis lyrata subsp. lyrata]
          Length = 583

 Score =  136 bits (342), Expect = 3e-30
 Identities = 67/111 (60%), Positives = 81/111 (72%)
 Frame = +3

Query: 270 MRSLTIYERFFKTFRDNPXXXXXXXXXXXXXXXXXAYSEASSSNGANIVASSEAGDRKKR 449
           MR+ +I+ERF K F+D+P                 AYSEA++S GAN     E G +KK+
Sbjct: 1   MRNFSIFERFSKAFQDHPSLTRILVVSTISGGGLIAYSEANASYGANGAGIVETGTKKKK 60

Query: 450 VVVLGTGWAGTSFMKNLKDSSYDVQVISPRNYFAFTPLLPSVTCGTVEARS 602
           VV+LGTGWAGTSF+KNL +S Y+VQ+ISPRNYFAFTPLLPSVTCGTVEARS
Sbjct: 61  VVLLGTGWAGTSFLKNLNNSQYEVQIISPRNYFAFTPLLPSVTCGTVEARS 111


>ref|XP_002305652.1| predicted protein [Populus trichocarpa] gi|222848616|gb|EEE86163.1|
           predicted protein [Populus trichocarpa]
          Length = 584

 Score =  125 bits (314), Expect = 6e-27
 Identities = 64/111 (57%), Positives = 77/111 (69%)
 Frame = +3

Query: 270 MRSLTIYERFFKTFRDNPXXXXXXXXXXXXXXXXXAYSEASSSNGANIVASSEAGDRKKR 449
           M  L++++R  + F D P                 AY++A+SSNGA+ VA      RKK+
Sbjct: 1   MNGLSLFKRASRAFDDYPSLAKLIVVCTVSGGGYVAYADANSSNGAHAVAPPVPEIRKKK 60

Query: 450 VVVLGTGWAGTSFMKNLKDSSYDVQVISPRNYFAFTPLLPSVTCGTVEARS 602
           VVV+GTGWAGTSF+K L + SYDVQVISPRNYFAFTPLLPSVTCGTVEARS
Sbjct: 61  VVVIGTGWAGTSFLKKLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARS 111


Top