BLASTX nr result

ID: Panax21_contig00020517 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00020517
         (1004 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACY30433.1| hypothetical protein [Nicotiana tabacum]               225   1e-56
ref|XP_002272445.1| PREDICTED: uncharacterized protein LOC100246...   210   4e-52
emb|CAN75887.1| hypothetical protein VITISV_024463 [Vitis vinifera]   210   5e-52
ref|XP_004151085.1| PREDICTED: uncharacterized protein LOC101212...   188   2e-45
ref|XP_002330855.1| predicted protein [Populus trichocarpa] gi|2...   178   2e-42

>gb|ACY30433.1| hypothetical protein [Nicotiana tabacum]
          Length = 376

 Score =  225 bits (574), Expect = 1e-56
 Identities = 115/195 (58%), Positives = 132/195 (67%)
 Frame = +3

Query: 420  IEDRIRQLEAVTXXXXXXXXXXXXXNPQEMGNIIAFEPRGFVGIENGVLNGEDSAVHLER 599
            IE+RIR LEAVT                        +  G V  E  V N +      ER
Sbjct: 1    IEERIRHLEAVTARALQRHRRRQART--------TIDTSGNVDSEMQVQNSDSVLDVAER 52

Query: 600  MVERGKSCKRDNSHLVARALEIDLDVKKEVGDGGNFYDCNICLDMTKEPILTCCGHLFCW 779
             VERG  CKRD+SHLVA+ALE+DL V K   DGG+F+DCNICLDM KEPILTCCGHL+CW
Sbjct: 53   TVERG--CKRDSSHLVAKALEMDLVVNKVDDDGGSFFDCNICLDMAKEPILTCCGHLYCW 110

Query: 780  ACFYQLPYVYSTAKECPVCKGEVIDANITPIYGNANDTHLSETESGLKIPPRPPAHRIES 959
             CFYQLPYV ST KECPVCKGEV D N+TP+YGN +   ++E ESGLKIPPRP A R+ES
Sbjct: 111  PCFYQLPYVDSTTKECPVCKGEVADGNVTPVYGNGDGESITELESGLKIPPRPKARRVES 170

Query: 960  VRQQRVNQRISHIPV 1004
            VRQQRV + +SHIPV
Sbjct: 171  VRQQRVTRGLSHIPV 185


>ref|XP_002272445.1| PREDICTED: uncharacterized protein LOC100246046 [Vitis vinifera]
          Length = 436

 Score =  210 bits (535), Expect = 4e-52
 Identities = 117/235 (49%), Positives = 149/235 (63%), Gaps = 13/235 (5%)
 Frame = +3

Query: 336  VVDLDLNLEPAS----SGVGFGPFLSQ--TAGGQIEDRIRQLEAVTXXXXXXXXXXXXXN 497
            ++DLDLNLEP      S +G G  L++  TA G+IE+RIRQLEAV               
Sbjct: 9    IMDLDLNLEPLDPPHDSMLGLGSLLTEIETAHGRIEERIRQLEAVNSRARQRQRWRQGRI 68

Query: 498  PQEMGNIIAFEPRGFVGIENGVLNGEDSAVHLERMVERGKSCKRDNSHLVARALEIDLDV 677
            P +    I+ EP     IE  V NGE S    ER VE  + CKR+ ++LVA+AL +  + 
Sbjct: 69   PPQT-TTISTEPMQVNSIEGRVQNGECSVAGQERTVENREGCKRNGAYLVAKALGMGTNA 127

Query: 678  KK---EVG---DGGNFYDCNICLDMTKEPILTCCGHLFCWACFYQLPYVYSTAKECPVCK 839
                 E+G   +GG+F+DCNICLDM ++PILTCCGHLFCW CFYQLP V+S  KECP C 
Sbjct: 128  NGGALEMGTNANGGSFFDCNICLDMARDPILTCCGHLFCWPCFYQLPNVHSNVKECPECN 187

Query: 840  GEVIDANITPIYGNANDTHLSET-ESGLKIPPRPPAHRIESVRQQRVNQRISHIP 1001
            GEVI+ +ITPIYG+ ++ H   T + G+K PPRP AHRIES+RQQRV + I   P
Sbjct: 188  GEVIETHITPIYGHGSNNHKVATGDLGVKAPPRPHAHRIESMRQQRVARGIPSFP 242


>emb|CAN75887.1| hypothetical protein VITISV_024463 [Vitis vinifera]
          Length = 427

 Score =  210 bits (534), Expect = 5e-52
 Identities = 117/234 (50%), Positives = 149/234 (63%), Gaps = 13/234 (5%)
 Frame = +3

Query: 339  VDLDLNLEPAS----SGVGFGPFLSQ--TAGGQIEDRIRQLEAVTXXXXXXXXXXXXXNP 500
            +DLDLNLEP      S +G G  L++  TA G+IE+RIRQLEAV               P
Sbjct: 1    MDLDLNLEPLDPPHDSMLGLGSLLTEIETAHGRIEERIRQLEAVNSRARQRQRWRQGRIP 60

Query: 501  QEMGNIIAFEPRGFVGIENGVLNGEDSAVHLERMVERGKSCKRDNSHLVARALEIDLDVK 680
             +    I+ EP     IE  V NGE S    ER VE  + CKR+ ++LVA+AL +  +  
Sbjct: 61   PQT-TTISTEPMQVNSIEGRVQNGECSVAGQERTVENREGCKRNGAYLVAKALGMGTNAN 119

Query: 681  K---EVG---DGGNFYDCNICLDMTKEPILTCCGHLFCWACFYQLPYVYSTAKECPVCKG 842
                E+G   +GG+F+DCNICLD+ ++PILTCCGHLFCW CFYQLP V+S  KECPVC G
Sbjct: 120  GGALEMGTNANGGSFFDCNICLDVARDPILTCCGHLFCWPCFYQLPNVHSNVKECPVCNG 179

Query: 843  EVIDANITPIYGNANDTHLSET-ESGLKIPPRPPAHRIESVRQQRVNQRISHIP 1001
            EVI+ +ITPIYG+ ++ H   T + G+K PPRP AHRIES+RQQRV + I   P
Sbjct: 180  EVIETHITPIYGHGSNNHKVATGDLGVKAPPRPHAHRIESMRQQRVARGIPSFP 233


>ref|XP_004151085.1| PREDICTED: uncharacterized protein LOC101212429 [Cucumis sativus]
           gi|449501587|ref|XP_004161409.1| PREDICTED:
           uncharacterized protein LOC101226819 [Cucumis sativus]
          Length = 451

 Score =  188 bits (477), Expect = 2e-45
 Identities = 106/225 (47%), Positives = 139/225 (61%), Gaps = 9/225 (4%)
 Frame = +3

Query: 324 REDMVVDLDLNLEPAS----SGVGFGPFLS--QTAGGQIEDRIRQLEAVTXXXXXXXXXX 485
           RED ++DLDLN EP      S +G    L+  +TA G+IE+RIRQLEAVT          
Sbjct: 8   RED-IMDLDLNQEPLDQSYDSVLGLDTILNDLETAHGRIEERIRQLEAVTTRATRRQRWR 66

Query: 486 XXXNPQEMGNIIAFEPRGFVGIENGVLNGEDSAVHLERMVERGKSCKRDNSHLVARALEI 665
                 E     A  P  +  +E      +DSA   +R++   K+ K++  HLVA+AL +
Sbjct: 67  HAPTVTEP----AETPAAYAHLERHE-TVDDSAAAQQRILHSEKTSKKNGPHLVAKALGM 121

Query: 666 DLDVKKEVGDGGNFYDCNICLDMTKEPILTCCGHLFCWACFYQLPYVYSTAKECPVCKGE 845
           D + K      G+ +DCNICLD+ K+PILTCCGHLFCW+CFYQL YV+S AKECP C+GE
Sbjct: 122 DSEPKATGNKMGSLFDCNICLDVAKDPILTCCGHLFCWSCFYQLSYVHSNAKECPECQGE 181

Query: 846 VIDANITPIYGNANDTHLSET---ESGLKIPPRPPAHRIESVRQQ 971
           V D +I PIYG+ N     ++   +SGLK+PPRP A RIES+RQQ
Sbjct: 182 VTDTSIIPIYGHGNGNRAQKSKPNDSGLKVPPRPRAQRIESMRQQ 226


>ref|XP_002330855.1| predicted protein [Populus trichocarpa] gi|222872677|gb|EEF09808.1|
           predicted protein [Populus trichocarpa]
          Length = 466

 Score =  178 bits (452), Expect = 2e-42
 Identities = 103/223 (46%), Positives = 128/223 (57%), Gaps = 9/223 (4%)
 Frame = +3

Query: 339 VDLDLNLEPA----SSGVGFGPFLSQTAG--GQIEDRIRQLEAVTXXXXXXXXXXXXXNP 500
           +DLDLN EP      S +G      +     G IE+R+RQLEAVT               
Sbjct: 1   MDLDLNQEPLYPSNDSLLGLASIRDELENTHGHIEERLRQLEAVTFRARQRQRWRQSHFT 60

Query: 501 QEMGNIIAFEPRGFVGIENGVLNGEDSAVHLERMVERGKSCKRDNSHLVARALEIDLDVK 680
            +  N+        V  + G+L GE S    ER  E  K  KR +++L+A+AL  + + K
Sbjct: 61  PQTVNVSVEPATVNVRSDGGLLIGEASVATEERRDEMNKFGKRKSTYLIAKALGRNGNGK 120

Query: 681 KEVGDGGNFYDCNICLDMTKEPILTCCGHLFCWACFYQLPYVYSTAKECPVCKGEVIDAN 860
           K   D  + +DCNICLDM ++PILT CGHLFCW CFYQL YVYS  KECPVC  EV D +
Sbjct: 121 KARTDRRSVFDCNICLDMAQDPILTSCGHLFCWPCFYQLSYVYSNVKECPVCVEEVTDTS 180

Query: 861 ITPIYGNAN---DTHLSETESGLKIPPRPPAHRIESVRQQRVN 980
           I PIYGN N   +  L   ESGLK+PPRP A R+ESVRQQ +N
Sbjct: 181 IIPIYGNGNSYDNKKLKLKESGLKVPPRPSAQRVESVRQQLIN 223


Top