BLASTX nr result

ID: Panax21_contig00020514 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00020514
         (599 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285023.2| PREDICTED: uncharacterized protein LOC100267...   225   4e-57
emb|CBI28156.3| unnamed protein product [Vitis vinifera]              225   4e-57
ref|XP_003550833.1| PREDICTED: uncharacterized protein LOC100795...   176   3e-42
ref|XP_003525657.1| PREDICTED: uncharacterized protein LOC100809...   176   4e-42
ref|XP_002524440.1| RNA binding protein, putative [Ricinus commu...   162   3e-38

>ref|XP_002285023.2| PREDICTED: uncharacterized protein LOC100267997 [Vitis vinifera]
          Length = 415

 Score =  225 bits (574), Expect = 4e-57
 Identities = 115/203 (56%), Positives = 140/203 (68%), Gaps = 5/203 (2%)
 Frame = -3

Query: 597 IFGNGHNYTVRYDA-----DESIVKQVSRKLTRPCPPSVEITDDWVPGELLEVFHNLSWK 433
           I GNGHNYTVRYD      DE+IV++V     RPCPP VE  + W+PG+++EVF N SWK
Sbjct: 28  ICGNGHNYTVRYDGHQSNIDEAIVERVPGSAIRPCPPPVEGPEGWIPGDIVEVFDNFSWK 87

Query: 432 MATVSKVLGRNFFVVRLVGTSQELKVRKFDLRVRQCWQDDEWIVIGKGSGNYEDWKQNDR 253
           MATVSKVLG+ +F+VR +G+S E KVRK+DLRVRQ WQDD+WIVIGK SG +ED K +  
Sbjct: 88  MATVSKVLGKKYFLVRHLGSSLEFKVRKYDLRVRQSWQDDKWIVIGKSSGTFEDRKPSGP 147

Query: 252 LNLKYIPDSGCRVKQTTARMNLHFKDHCFDSWDNVYFLEPSNVSSRTLKSGSPCQYSQVE 73
               YI +S  +V++   RM L  KD+CF   +N  F E    SSRTLK GSP  YSQVE
Sbjct: 148 PTHNYIQNSSFQVQEMDTRMKLSRKDNCFTVKNNADFPESRIASSRTLKRGSPFGYSQVE 207

Query: 72  AHEGNPQKFLAAEKEGRSHRVAA 4
           A+ G+ QKF   EKEGR HR  A
Sbjct: 208 AYAGSAQKFRLTEKEGRLHRAVA 230


>emb|CBI28156.3| unnamed protein product [Vitis vinifera]
          Length = 265

 Score =  225 bits (574), Expect = 4e-57
 Identities = 115/203 (56%), Positives = 140/203 (68%), Gaps = 5/203 (2%)
 Frame = -3

Query: 597 IFGNGHNYTVRYDA-----DESIVKQVSRKLTRPCPPSVEITDDWVPGELLEVFHNLSWK 433
           I GNGHNYTVRYD      DE+IV++V     RPCPP VE  + W+PG+++EVF N SWK
Sbjct: 28  ICGNGHNYTVRYDGHQSNIDEAIVERVPGSAIRPCPPPVEGPEGWIPGDIVEVFDNFSWK 87

Query: 432 MATVSKVLGRNFFVVRLVGTSQELKVRKFDLRVRQCWQDDEWIVIGKGSGNYEDWKQNDR 253
           MATVSKVLG+ +F+VR +G+S E KVRK+DLRVRQ WQDD+WIVIGK SG +ED K +  
Sbjct: 88  MATVSKVLGKKYFLVRHLGSSLEFKVRKYDLRVRQSWQDDKWIVIGKSSGTFEDRKPSGP 147

Query: 252 LNLKYIPDSGCRVKQTTARMNLHFKDHCFDSWDNVYFLEPSNVSSRTLKSGSPCQYSQVE 73
               YI +S  +V++   RM L  KD+CF   +N  F E    SSRTLK GSP  YSQVE
Sbjct: 148 PTHNYIQNSSFQVQEMDTRMKLSRKDNCFTVKNNADFPESRIASSRTLKRGSPFGYSQVE 207

Query: 72  AHEGNPQKFLAAEKEGRSHRVAA 4
           A+ G+ QKF   EKEGR HR  A
Sbjct: 208 AYAGSAQKFRLTEKEGRLHRAVA 230


>ref|XP_003550833.1| PREDICTED: uncharacterized protein LOC100795963 [Glycine max]
          Length = 404

 Score =  176 bits (446), Expect = 3e-42
 Identities = 93/200 (46%), Positives = 130/200 (65%), Gaps = 5/200 (2%)
 Frame = -3

Query: 597 IFGNGHNYTVRYD-----ADESIVKQVSRKLTRPCPPSVEITDDWVPGELLEVFHNLSWK 433
           I  NGH+YTV+YD     A E+IV++VSRK  RPCPP++E+TD+W PG+++E+F N SWK
Sbjct: 28  ICSNGHHYTVKYDGYESDAGEAIVERVSRKDLRPCPPALELTDNWSPGDVVEIFQNFSWK 87

Query: 432 MATVSKVLGRNFFVVRLVGTSQELKVRKFDLRVRQCWQDDEWIVIGKGSGNYEDWKQNDR 253
           MATV K+LG+N  +VRL+G+S E +V KFD+RVRQ WQDD+WI++GKGS + E+ K+   
Sbjct: 88  MATVLKILGKNHILVRLLGSSLEFQVSKFDIRVRQSWQDDKWIIVGKGSSSCENRKR--- 144

Query: 252 LNLKYIPDSGCRVKQTTARMNLHFKDHCFDSWDNVYFLEPSNVSSRTLKSGSPCQYSQVE 73
                   S  ++++T+ +  L    +       +  LE   +  +TLK GS    SQVE
Sbjct: 145 --------SSTQLQKTSTKTKLSGSAYYRPEKKKLSILESELIYFKTLKRGS---NSQVE 193

Query: 72  AHEGNPQKFLAAEKEGRSHR 13
           A+   P KF A E EGR HR
Sbjct: 194 AYAEPPPKFRALENEGRCHR 213


>ref|XP_003525657.1| PREDICTED: uncharacterized protein LOC100809539 [Glycine max]
          Length = 397

 Score =  176 bits (445), Expect = 4e-42
 Identities = 95/200 (47%), Positives = 129/200 (64%), Gaps = 5/200 (2%)
 Frame = -3

Query: 597 IFGNGHNYTVRYD-----ADESIVKQVSRKLTRPCPPSVEITDDWVPGELLEVFHNLSWK 433
           I GNGH+YTV+YD     A E+IV+QVSRK  RPCPP++E+TD+W  G+++EVF N SWK
Sbjct: 28  ICGNGHHYTVKYDGYESDAGEAIVEQVSRKDIRPCPPALELTDNWNSGDVVEVFQNFSWK 87

Query: 432 MATVSKVLGRNFFVVRLVGTSQELKVRKFDLRVRQCWQDDEWIVIGKGSGNYEDWKQNDR 253
           MATV KV G+N  +VRL+G+S E +V KFD+RVRQ WQDD+WI++GKGS ++E+ K+   
Sbjct: 88  MATVLKVFGKNHILVRLLGSSLEFQVSKFDIRVRQSWQDDKWIIVGKGSSSHENRKR--- 144

Query: 252 LNLKYIPDSGCRVKQTTARMNLHFKDHCFDSWDNVYFLEPSNVSSRTLKSGSPCQYSQVE 73
                   S  ++++   +  L    +       +  LE   VS +TLK GS    SQV+
Sbjct: 145 --------SSAQLQKMYTKTKLSGSAYYRPEKKKLSILESKLVSFKTLKRGS---NSQVD 193

Query: 72  AHEGNPQKFLAAEKEGRSHR 13
           A+   P KF A E EGR HR
Sbjct: 194 AYAKPPPKFRARENEGRCHR 213


>ref|XP_002524440.1| RNA binding protein, putative [Ricinus communis]
           gi|223536228|gb|EEF37880.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 383

 Score =  162 bits (411), Expect = 3e-38
 Identities = 93/200 (46%), Positives = 121/200 (60%), Gaps = 2/200 (1%)
 Frame = -3

Query: 597 IFGNGHNYTVRYDADESIVKQVSRKLTRPCPPSVEITDDWVPGELLEVFHNLSWKMATVS 418
           I GNGH YTVRY+A                       ++W PG+++EVF + SWKMAT+S
Sbjct: 28  ICGNGHTYTVRYEAH---------------------AENWAPGDVVEVFDDFSWKMATIS 66

Query: 417 KVLGRNFFVVRLVGTSQELKVRKFDLRVRQCWQDDEWIVIGKGSGNYEDWKQNDRLNLKY 238
           KVLG+ +F+ R+VG+S E KV K  +R RQ WQD +WIVIGKGSG+YED K ++ + LK 
Sbjct: 67  KVLGKKYFLARIVGSSLEFKVSKSGIRTRQSWQDGKWIVIGKGSGSYEDTKHDENVTLKC 126

Query: 237 IPDSGCRVKQTTARMNL-HFKDHCFDSWDNVYFLEPSN-VSSRTLKSGSPCQYSQVEAHE 64
             +S   V+  + R+ +  F+        N   L+ SN VS RTLK G PC Y QVE ++
Sbjct: 127 KQNSQNNVQMRSTRLKVGSFR------MRNKETLKGSNIVSCRTLKRG-PCGYKQVETYD 179

Query: 63  GNPQKFLAAEKEGRSHRVAA 4
           G  QKF A EKEGR HRV A
Sbjct: 180 GAAQKFRAVEKEGRLHRVLA 199


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