BLASTX nr result

ID: Panax21_contig00020468 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00020468
         (353 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002327738.1| predicted protein [Populus trichocarpa] gi|2...   143   1e-32
ref|XP_002272810.2| PREDICTED: protein MID1-COMPLEMENTING ACTIVI...   142   2e-32
emb|CBI22120.3| unnamed protein product [Vitis vinifera]              142   2e-32
ref|XP_002531154.1| conserved hypothetical protein [Ricinus comm...   140   8e-32
dbj|BAK32933.1| mid1-complementing activity 2 [Nicotiana tabacum]     130   1e-28

>ref|XP_002327738.1| predicted protein [Populus trichocarpa] gi|222836823|gb|EEE75216.1|
           predicted protein [Populus trichocarpa]
          Length = 419

 Score =  143 bits (361), Expect = 1e-32
 Identities = 74/117 (63%), Positives = 87/117 (74%)
 Frame = -3

Query: 351 KKTLSCSYPNLPFKEAIRKENEKLQLELQRSQAHLDVSQCEVIQHLIDVTEAVSVNSLPE 172
           KKTLSCSYPN+ F EA+RKENEKLQLELQRSQAHLDV+QCEVIQHLI+VTE  + +SLPE
Sbjct: 176 KKTLSCSYPNMCFNEALRKENEKLQLELQRSQAHLDVNQCEVIQHLIEVTEVAAASSLPE 235

Query: 171 KSSPVRNSKKLEPNYSDVSRAKDHYGDTYTKKNGXXXXXXXXXXXXSGHDLLSTRGS 1
           KSS  ++SKKLEP YSD S  K  + D+Y+ K+             S  DLLS+RGS
Sbjct: 236 KSSSTKSSKKLEPAYSDASENKHSFDDSYSTKSDSHKTSRNTSSVSSRDDLLSSRGS 292


>ref|XP_002272810.2| PREDICTED: protein MID1-COMPLEMENTING ACTIVITY 1-like [Vitis
           vinifera]
          Length = 420

 Score =  142 bits (359), Expect = 2e-32
 Identities = 75/118 (63%), Positives = 89/118 (75%), Gaps = 1/118 (0%)
 Frame = -3

Query: 351 KKTLSCSYPNLPFKEAIRKENEKLQLELQRSQAHLDVSQCEVIQHLIDVTEAVSVNSLPE 172
           KKTLSCSYPNLPF  A++KENEKLQLELQRSQA+ DV QCEVIQHLI VTEAV+ NS+PE
Sbjct: 176 KKTLSCSYPNLPFNAALKKENEKLQLELQRSQANYDVDQCEVIQHLIGVTEAVAANSVPE 235

Query: 171 KSSPVRNSKKLEPNYSDVSRAKDHYGD-TYTKKNGXXXXXXXXXXXXSGHDLLSTRGS 1
           K+ PVR+SKK E +YSD +  K++  D +Y K++             SGHDLLSTRGS
Sbjct: 236 KNLPVRSSKKAESDYSDANSDKEYSVDESYPKRSDTRTASRNISSVSSGHDLLSTRGS 293


>emb|CBI22120.3| unnamed protein product [Vitis vinifera]
          Length = 319

 Score =  142 bits (359), Expect = 2e-32
 Identities = 75/118 (63%), Positives = 89/118 (75%), Gaps = 1/118 (0%)
 Frame = -3

Query: 351 KKTLSCSYPNLPFKEAIRKENEKLQLELQRSQAHLDVSQCEVIQHLIDVTEAVSVNSLPE 172
           KKTLSCSYPNLPF  A++KENEKLQLELQRSQA+ DV QCEVIQHLI VTEAV+ NS+PE
Sbjct: 75  KKTLSCSYPNLPFNAALKKENEKLQLELQRSQANYDVDQCEVIQHLIGVTEAVAANSVPE 134

Query: 171 KSSPVRNSKKLEPNYSDVSRAKDHYGD-TYTKKNGXXXXXXXXXXXXSGHDLLSTRGS 1
           K+ PVR+SKK E +YSD +  K++  D +Y K++             SGHDLLSTRGS
Sbjct: 135 KNLPVRSSKKAESDYSDANSDKEYSVDESYPKRSDTRTASRNISSVSSGHDLLSTRGS 192


>ref|XP_002531154.1| conserved hypothetical protein [Ricinus communis]
           gi|223529267|gb|EEF31239.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 283

 Score =  140 bits (354), Expect = 8e-32
 Identities = 68/93 (73%), Positives = 80/93 (86%)
 Frame = -3

Query: 351 KKTLSCSYPNLPFKEAIRKENEKLQLELQRSQAHLDVSQCEVIQHLIDVTEAVSVNSLPE 172
           KKTLSCSYPN+ F EA+RKE++KLQLELQRSQA+LDV+QCEVIQHLIDVTEA + NSLPE
Sbjct: 176 KKTLSCSYPNMGFNEALRKESQKLQLELQRSQANLDVNQCEVIQHLIDVTEAAAANSLPE 235

Query: 171 KSSPVRNSKKLEPNYSDVSRAKDHYGDTYTKKN 73
           KSSPV+ S+KLEPNYSDVS     +  +Y KK+
Sbjct: 236 KSSPVKTSQKLEPNYSDVSEKNHSFDGSYHKKS 268


>dbj|BAK32933.1| mid1-complementing activity 2 [Nicotiana tabacum]
          Length = 419

 Score =  130 bits (327), Expect = 1e-28
 Identities = 66/116 (56%), Positives = 82/116 (70%)
 Frame = -3

Query: 348 KTLSCSYPNLPFKEAIRKENEKLQLELQRSQAHLDVSQCEVIQHLIDVTEAVSVNSLPEK 169
           K LSCSYP +P  EAI+KENEKLQLELQRSQA+LDV QCE IQHL+DVTE V+ NSL  K
Sbjct: 177 KNLSCSYPRVPINEAIKKENEKLQLELQRSQANLDVGQCEFIQHLLDVTEVVATNSLSLK 236

Query: 168 SSPVRNSKKLEPNYSDVSRAKDHYGDTYTKKNGXXXXXXXXXXXXSGHDLLSTRGS 1
           SSP++  KKL+ +YS+V    DHY ++Y K +             S H+LLS++GS
Sbjct: 237 SSPIKPPKKLDESYSNVDSYTDHYVESYAKNDEKQATSRNASSVSSKHELLSSKGS 292


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