BLASTX nr result

ID: Panax21_contig00020450 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00020450
         (945 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269494.1| PREDICTED: uncharacterized protein LOC100250...   164   2e-53
gb|ABK96719.1| unknown [Populus trichocarpa x Populus deltoides]      137   1e-41
gb|ADB08056.1| microtubule-associated protein [Nicotiana bentham...   154   3e-35
ref|XP_002527807.1| conserved hypothetical protein [Ricinus comm...   147   3e-33
ref|XP_002309012.1| predicted protein [Populus trichocarpa] gi|2...   133   5e-29

>ref|XP_002269494.1| PREDICTED: uncharacterized protein LOC100250355 [Vitis vinifera]
          Length = 830

 Score =  164 bits (414), Expect(2) = 2e-53
 Identities = 102/225 (45%), Positives = 120/225 (53%), Gaps = 5/225 (2%)
 Frame = +3

Query: 3    ACNSTSLPSLPMYTGAYNPSKSVIMRGHSLSSDYVSPITATSFVPESYWEEKWRVLHXXX 182
            A  + S    P + GA+  SK   +R HSLS D  SP T  S VPESYWEEKWRVLH   
Sbjct: 440  ALEANSSNPYPSFRGAHERSKLSAVRSHSLSFDCSSPTTPLSLVPESYWEEKWRVLHKEE 499

Query: 183  XXXXXXXXXXIPNRIKGWSEKVKLRLSRTESDTSIXXXXXXXXXXXXXXXXXXXXXXARQ 362
                      +P R KGWSEKV+L LSRT SD S                        RQ
Sbjct: 500  ELKRGSSQKQVPTRKKGWSEKVRLHLSRTGSDPSHMKVEKGKKDPKSSVRRSLLEDLCRQ 559

Query: 363  LGSEEDAENVVCGEDVQRKD----AVEEHEQDVNIKDFSSTSDDRCLNGNVGSEEESSIF 530
            LGSEED   +V  E + +KD     VE  EQD N+  F+  +DD  L GN GSEE SSIF
Sbjct: 560  LGSEEDIGEIVRNEVLDQKDPIHVEVEVEEQDANLNSFTCPADDSHLIGNTGSEENSSIF 619

Query: 531  SDSPSPIGGATDLENESD-SSVASNLSVVENDIEQNNADCSRSDP 662
            S S SP+    D EN+S+ SS+ SN S+ END E NNA+  R  P
Sbjct: 620  SASTSPL--TNDHENDSEKSSIVSNSSLDENDDEPNNAEAFRIIP 662



 Score = 72.8 bits (177), Expect(2) = 2e-53
 Identities = 35/49 (71%), Positives = 40/49 (81%), Gaps = 1/49 (2%)
 Frame = +1

Query: 778 DSTGKPSANSKERKLVPGKFQWFWKFGRN-AGDGTSEKGGSSEATKASN 921
           DSTGK  A  KERKL+ GKFQWFWKFGRN AG+ TSEK G+SEA K++N
Sbjct: 684 DSTGKQEAGLKERKLLSGKFQWFWKFGRNAAGEETSEKEGASEAAKSAN 732


>gb|ABK96719.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 823

 Score =  137 bits (345), Expect(2) = 1e-41
 Identities = 87/217 (40%), Positives = 118/217 (54%), Gaps = 7/217 (3%)
 Frame = +3

Query: 33   PMYTGAYNPSKSVIMRGHS--LSSDYVSPITATSFVPESYWEEKWRVLHXXXXXXXXXXX 206
            P + G YN SKS+++RGH+  LSS  VSP T  + VP+SYWEEKWR LH           
Sbjct: 444  PPFDGIYNHSKSLVVRGHTNALSSGSVSPKTPLNAVPDSYWEEKWRDLHKTEELKHDHLG 503

Query: 207  XXIPNRIKGWSEKVKLRLSRTESDTSIXXXXXXXXXXXXXXXXXXXXXXARQLGSEEDAE 386
               P++ K W+EKV+L LSRTES  +                       + +LG + D  
Sbjct: 504  KLKPSQKKRWTEKVRLPLSRTESAPAPVKAGSGKKDQKSSIRRSLLEDLSHELGMDGDIG 563

Query: 387  NVVCGEDVQRKD----AVEEHEQDVNIKDFSSTSDDRCLNGNVGSEEESSIFSDSPSPIG 554
               C E   +KD     VE    D    DF+ ++++RCL+GN GSEE SS+FSD  S + 
Sbjct: 564  KSDCHEVSGKKDHQTAEVEGGGPDSVNNDFTCSTEERCLSGNSGSEENSSVFSDPSSSLS 623

Query: 555  GATDLENESD-SSVASNLSVVENDIEQNNADCSRSDP 662
            G  + EN+S+ SSVASN+SV END   + A+  + DP
Sbjct: 624  GGNEHENDSEKSSVASNMSVDEND---DQAEALQEDP 657



 Score = 59.7 bits (143), Expect(2) = 1e-41
 Identities = 35/57 (61%), Positives = 38/57 (66%), Gaps = 2/57 (3%)
 Frame = +1

Query: 778 DSTGKPSANSKERKLVPGKFQWFWKFGRN-AGDGTSEKG-GSSEATKASNSGCIQHN 942
           +  GK  A  KERKL  GKFQWFWKFGRN AG+ TSEKG G+ EATK  N    Q N
Sbjct: 677 EPAGKQVAGPKERKL-SGKFQWFWKFGRNTAGEETSEKGSGTFEATKPVNDASNQIN 732


>gb|ADB08056.1| microtubule-associated protein [Nicotiana benthamiana]
          Length = 813

 Score =  154 bits (389), Expect = 3e-35
 Identities = 89/206 (43%), Positives = 119/206 (57%), Gaps = 2/206 (0%)
 Frame = +3

Query: 39   YTGAYNPSKSVIMRGHSLSSDYVSPITATS-FVPESYWEEKWRVLHXXXXXXXXXXXXXI 215
            +TG Y  ++S ++RGHS S D  SP T     VPESYWEEKWRVLH             +
Sbjct: 444  HTGIYGKNQSTVVRGHSHSVDLSSPKTPRGPVVPESYWEEKWRVLHKEEERKQNSAEKQV 503

Query: 216  PNRIKGWSEKVKLRLSRTESDTSIXXXXXXXXXXXXXXXXXXXXXXARQLGSEEDAENVV 395
            PNR KGWSEKV+LRL+RTES  +                       A+QLG++ED E ++
Sbjct: 504  PNRRKGWSEKVRLRLTRTESAPT-PSTVDNGKKAPKSVRRSLLNDLAQQLGADEDIEKLI 562

Query: 396  CGEDVQRKDAVEEHEQDVNIKDFSSTSDDRCLNGNVGSEEESSIFSDSPSPIGGATDLEN 575
              E+++++  V+   QD N  +F+ TS++ C  G+  SE+ SSIFSD PSPI  A D EN
Sbjct: 563  DDENIEQEAPVDVVGQDCNDGNFTCTSEESCSTGSAASEQNSSIFSDPPSPISDANDHEN 622

Query: 576  ESD-SSVASNLSVVENDIEQNNADCS 650
             S+ SSVASN S  E D + N+ + S
Sbjct: 623  RSERSSVASNFSADEIDADVNSGEAS 648



 Score = 63.9 bits (154), Expect = 5e-08
 Identities = 31/50 (62%), Positives = 35/50 (70%)
 Frame = +1

Query: 778 DSTGKPSANSKERKLVPGKFQWFWKFGRNAGDGTSEKGGSSEATKASNSG 927
           DS GK     KERKL+ GKFQW WKFGRN G+ TSEK G  ++TKA N G
Sbjct: 675 DSGGKGPVGFKERKLLSGKFQWLWKFGRNGGEETSEK-GIGDSTKACNCG 723


>ref|XP_002527807.1| conserved hypothetical protein [Ricinus communis]
            gi|223532803|gb|EEF34579.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 825

 Score =  147 bits (372), Expect = 3e-33
 Identities = 87/202 (43%), Positives = 114/202 (56%), Gaps = 5/202 (2%)
 Frame = +3

Query: 33   PMYTGAYNPSKSVIMRGHSLSSDYVSPITATSFVPESYWEEKWRVLHXXXXXXXXXXXXX 212
            P + G YN SKS+++RGH+LSSD +SP T  + VP+SYWEEKWRVLH             
Sbjct: 451  PPFGGTYNHSKSMVVRGHTLSSDSISPKTPLTMVPDSYWEEKWRVLHKAEEQKHRTGKQN 510

Query: 213  IPNRIKGWSEKVKLRLSRTESDTSIXXXXXXXXXXXXXXXXXXXXXXARQLGSEEDAENV 392
               + KGWSEKV+L LSRT SD S                       +R+LG ++D E  
Sbjct: 511  STPK-KGWSEKVRLTLSRTASDPSPAKVGNGKRVQKPSVRRRLLEDLSRELGFDDDTEKA 569

Query: 393  VCGEDVQRKD----AVEEHEQDVNIKDFSSTSDDRCLNGNVGSEEESSIFSDSPSPIGGA 560
             C E   + D     VE  ++D   KDF  T + RC +GN GSEE SS+FSD  SP+ GA
Sbjct: 570  DCSEVSDQNDNICAEVEGEDRDGVCKDF--TGEGRCSSGNTGSEENSSLFSDPSSPLSGA 627

Query: 561  TDLENESD-SSVASNLSVVEND 623
             + E++S+ SS+ASN S+ E D
Sbjct: 628  DNHEHDSEKSSIASNSSIDETD 649


>ref|XP_002309012.1| predicted protein [Populus trichocarpa] gi|222854988|gb|EEE92535.1|
            predicted protein [Populus trichocarpa]
          Length = 804

 Score =  133 bits (335), Expect = 5e-29
 Identities = 84/200 (42%), Positives = 109/200 (54%), Gaps = 3/200 (1%)
 Frame = +3

Query: 33   PMYTGAYNPSKSVIMRGHS--LSSDYVSPITATSFVPESYWEEKWRVLHXXXXXXXXXXX 206
            P + G YN S+S++ RGH+  LSSD VSP T  + VP+SYWEEKWRV+H           
Sbjct: 436  PPFDGIYNHSRSMVTRGHTHTLSSDSVSPKTPLNAVPDSYWEEKWRVMHKAEELKHDSLG 495

Query: 207  XXIPNRIKGWSEKVKLRLSRTESDTSIXXXXXXXXXXXXXXXXXXXXXXARQLGSEEDAE 386
               P + K W+EKV+L L RTES  +                       +R+LG +ED  
Sbjct: 496  KLNPTQKKRWTEKVRLPLCRTESAPTPVSVGSGKKDQKSSVRRSLLEDLSRELGLDEDTG 555

Query: 387  NVVCGEDVQRKDAVEEHEQDVNIKDFSSTSDDRCLNGNVGSEEESSIFSDSPSPIGGATD 566
               C E       V     +VN  DF+ ++ +RCL+G  GSEE SS+FSD  S + G  D
Sbjct: 556  KPDCHE-------VSGGPVNVN-NDFACSTVERCLSGIAGSEETSSVFSDPSSSLSGVND 607

Query: 567  LENESD-SSVASNLSVVEND 623
             ENES+ SSVASN+SV END
Sbjct: 608  HENESEKSSVASNMSVDEND 627



 Score = 62.0 bits (149), Expect = 2e-07
 Identities = 33/57 (57%), Positives = 37/57 (64%), Gaps = 2/57 (3%)
 Frame = +1

Query: 778 DSTGKPSANSKERKLVPGKFQWFWKFGRN-AGDGTSEKGGSS-EATKASNSGCIQHN 942
           + TGK  A  KERKL+ GKFQW WKFGRN AG+ TSEKG  + E TK  N    Q N
Sbjct: 657 EPTGKQVAGPKERKLLSGKFQWIWKFGRNTAGEETSEKGSDTLETTKPGNDASNQIN 713


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