BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00020443
         (637 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518674.1| ribosomal pseudouridine synthase, putative [...   182   3e-44
ref|XP_002282614.1| PREDICTED: RNA pseudourine synthase 4, mitoc...   179   5e-43
ref|XP_002313876.1| predicted protein [Populus trichocarpa] gi|2...   175   7e-42
ref|XP_003516775.1| PREDICTED: RNA pseudourine synthase 4, mitoc...   162   4e-38
ref|XP_004137095.1| PREDICTED: RNA pseudourine synthase 4, mitoc...   162   6e-38

>ref|XP_002518674.1| ribosomal pseudouridine synthase, putative [Ricinus communis]
           gi|223542055|gb|EEF43599.1| ribosomal pseudouridine
           synthase, putative [Ricinus communis]
          Length = 536

 Score =  182 bits (463), Expect = 3e-44
 Identities = 90/130 (69%), Positives = 102/130 (78%), Gaps = 2/130 (1%)
 Frame = -2

Query: 636 ELCPRTGRKHQLRVHCAEVLGTPIVGDYKYGWQAHRK--HFPFSDLEQNLNEKFLKRKTL 463
           EL P TGRKHQLRVHCAEVLGTPIVGDYKYGWQ HRK    PF +LE+  NE  L +K L
Sbjct: 407 ELSPITGRKHQLRVHCAEVLGTPIVGDYKYGWQVHRKWKQLPFPNLEKISNENALCKKIL 466

Query: 462 PFGLDLEHGGISEKQPQLHLHCKEMVLPDVSMALDRAQRYSTRDLSNIQSLKLDAPLPFH 283
           PFG+DLE G ISEK P+LHLHCK+MVLPDVS AL   Q  S  D S+++S++LDAPLP +
Sbjct: 467 PFGIDLESGSISEKHPRLHLHCKQMVLPDVSQALRGVQTSSNYDFSDLKSIELDAPLPSY 526

Query: 282 MQRSWDILYS 253
           MQRSWDIL S
Sbjct: 527 MQRSWDILNS 536


>ref|XP_002282614.1| PREDICTED: RNA pseudourine synthase 4, mitochondrial [Vitis
           vinifera] gi|296090438|emb|CBI40257.3| unnamed protein
           product [Vitis vinifera]
          Length = 476

 Score =  179 bits (453), Expect = 5e-43
 Identities = 89/130 (68%), Positives = 101/130 (77%), Gaps = 2/130 (1%)
 Frame = -2

Query: 636 ELCPRTGRKHQLRVHCAEVLGTPIVGDYKYGWQAHRKHFPF--SDLEQNLNEKFLKRKTL 463
           EL P TGRKHQLRVHCAEVLGTPIVGDYKYGWQAHRK      S++E+NL+E    RKT 
Sbjct: 347 ELSPLTGRKHQLRVHCAEVLGTPIVGDYKYGWQAHRKWKQLFQSNIEKNLDENLSNRKTH 406

Query: 462 PFGLDLEHGGISEKQPQLHLHCKEMVLPDVSMALDRAQRYSTRDLSNIQSLKLDAPLPFH 283
           PFGLDLE G I +KQP LHLHCK+MVLP+VS+AL   Q  +  DLS ++SL+  APLP H
Sbjct: 407 PFGLDLESGSILDKQPHLHLHCKQMVLPNVSLALQNLQLSAECDLSELESLEFVAPLPSH 466

Query: 282 MQRSWDILYS 253
           MQRSWDIL S
Sbjct: 467 MQRSWDILNS 476


>ref|XP_002313876.1| predicted protein [Populus trichocarpa] gi|222850284|gb|EEE87831.1|
           predicted protein [Populus trichocarpa]
          Length = 324

 Score =  175 bits (443), Expect = 7e-42
 Identities = 86/128 (67%), Positives = 97/128 (75%), Gaps = 2/128 (1%)
 Frame = -2

Query: 636 ELCPRTGRKHQLRVHCAEVLGTPIVGDYKYGWQAHR--KHFPFSDLEQNLNEKFLKRKTL 463
           EL P TGRKHQLRVHCAEVLGTPIVGDYKY WQAHR  K   +S++E N N+K L  K L
Sbjct: 197 ELSPLTGRKHQLRVHCAEVLGTPIVGDYKYAWQAHRNWKQLQWSNIEDNSNDKSLSEKIL 256

Query: 462 PFGLDLEHGGISEKQPQLHLHCKEMVLPDVSMALDRAQRYSTRDLSNIQSLKLDAPLPFH 283
           PF LDL+ G ISEK P+LHLHCK+MVLPDVS AL   Q  S  D S + SLK DAPLP +
Sbjct: 257 PFALDLDSGSISEKHPRLHLHCKQMVLPDVSKALQDVQLSSDYDFSQLASLKFDAPLPPY 316

Query: 282 MQRSWDIL 259
           M++SWDIL
Sbjct: 317 MKKSWDIL 324


>ref|XP_003516775.1| PREDICTED: RNA pseudourine synthase 4, mitochondrial-like [Glycine
           max]
          Length = 427

 Score =  162 bits (411), Expect = 4e-38
 Identities = 80/127 (62%), Positives = 96/127 (75%), Gaps = 2/127 (1%)
 Frame = -2

Query: 636 ELCPRTGRKHQLRVHCAEVLGTPIVGDYKYGWQAHRK--HFPFSDLEQNLNEKFLKRKTL 463
           EL P TGRKHQLRVHCAEVLGTPIVGDYKYGWQAHRK  HF   ++E +  E+ L  + L
Sbjct: 299 ELTPLTGRKHQLRVHCAEVLGTPIVGDYKYGWQAHRKWGHFDLPNVEDS-REELLNEEKL 357

Query: 462 PFGLDLEHGGISEKQPQLHLHCKEMVLPDVSMALDRAQRYSTRDLSNIQSLKLDAPLPFH 283
           PFGL+L  G ISE  P+LHLHCK+MVLP++S AL   Q  S+ DLS ++ L+L A LP +
Sbjct: 358 PFGLNLNKGSISENHPRLHLHCKQMVLPNISQALQNVQSASSCDLSLVEELELVADLPPY 417

Query: 282 MQRSWDI 262
           MQRSWD+
Sbjct: 418 MQRSWDV 424


>ref|XP_004137095.1| PREDICTED: RNA pseudourine synthase 4, mitochondrial-like [Cucumis
           sativus]
          Length = 466

 Score =  162 bits (409), Expect = 6e-38
 Identities = 79/128 (61%), Positives = 94/128 (73%)
 Frame = -2

Query: 636 ELCPRTGRKHQLRVHCAEVLGTPIVGDYKYGWQAHRKHFPFSDLEQNLNEKFLKRKTLPF 457
           ELCP TGRKHQLRVHCAEVLGTPIVGDYKYGWQAH+   PF     N ++   K++ LPF
Sbjct: 344 ELCPLTGRKHQLRVHCAEVLGTPIVGDYKYGWQAHKNWKPFC---SNFHKNQGKKQFLPF 400

Query: 456 GLDLEHGGISEKQPQLHLHCKEMVLPDVSMALDRAQRYSTRDLSNIQSLKLDAPLPFHMQ 277
           GLD E G I+E  P+LHLHCK++ LPDVS AL        RD S ++ L+LDAPLP +MQ
Sbjct: 401 GLDFESGSIAENNPRLHLHCKQLTLPDVSFALHNDS--LDRDCSRLECLELDAPLPSYMQ 458

Query: 276 RSWDILYS 253
           +SWDI+ S
Sbjct: 459 KSWDIINS 466