BLASTX nr result

ID: Panax21_contig00020431 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00020431
         (691 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16383.3| unnamed protein product [Vitis vinifera]              265   e-105
ref|XP_002282827.1| PREDICTED: tRNA-specific 2-thiouridylase mnm...   265   e-105
ref|XP_004142116.1| PREDICTED: tRNA-specific 2-thiouridylase Mnm...   258   e-104
ref|XP_003539065.1| PREDICTED: tRNA-specific 2-thiouridylase mnm...   254   e-103
ref|XP_002298404.1| predicted protein [Populus trichocarpa] gi|2...   253   e-102

>emb|CBI16383.3| unnamed protein product [Vitis vinifera]
          Length = 544

 Score =  265 bits (676), Expect(2) = e-105
 Identities = 123/141 (87%), Positives = 131/141 (92%)
 Frame = +3

Query: 3   NFWSECPWEEDLKYAKAVCNQVDVPLEVVHLTDEYWSNVVSYIIEEYRCGRTPNPDVLCN 182
           NFWSECPWE+DLKYAKAVC+QVDVPLEVVHLTDEYW NVVSYIIEEYRCGRTPNPDVLCN
Sbjct: 129 NFWSECPWEDDLKYAKAVCDQVDVPLEVVHLTDEYWKNVVSYIIEEYRCGRTPNPDVLCN 188

Query: 183 TRIKFGAFMDAISSMGFDFVASGHYAKVVHPFTDRTDGPSVLQLSKDMVKDQTYFLSHLS 362
           TRIKFGAFMDAISS  FD+VASGHYA VVH FTD+ D PSVL+LSKDMVKDQTYFLSHLS
Sbjct: 189 TRIKFGAFMDAISSKEFDYVASGHYANVVHSFTDQMDKPSVLELSKDMVKDQTYFLSHLS 248

Query: 363 QTQLKRLIFPLGCVPKVRIQS 425
           Q QLKRLIFPLGC+PK  ++S
Sbjct: 249 QIQLKRLIFPLGCIPKDEVRS 269



 Score =  142 bits (359), Expect(2) = e-105
 Identities = 65/79 (82%), Positives = 69/79 (87%)
 Frame = +2

Query: 416 DTVRKIAKNFDLPNQVRKDSQGICFLGKIKFSEFVERHIGETEGVILEAETGDFLGKHRG 595
           D VR +A   DLPN+ RKDSQGICFLGKIKFSEFV RHIGE EG+ILEAETGD LGKHRG
Sbjct: 265 DEVRSLATKLDLPNRDRKDSQGICFLGKIKFSEFVARHIGEKEGIILEAETGDLLGKHRG 324

Query: 596 FWFYTVGQRQGLRLSGGPW 652
           FWFYT+GQRQGLRL GGPW
Sbjct: 325 FWFYTIGQRQGLRLPGGPW 343


>ref|XP_002282827.1| PREDICTED: tRNA-specific 2-thiouridylase mnmA-like [Vitis vinifera]
          Length = 540

 Score =  265 bits (676), Expect(2) = e-105
 Identities = 123/141 (87%), Positives = 131/141 (92%)
 Frame = +3

Query: 3   NFWSECPWEEDLKYAKAVCNQVDVPLEVVHLTDEYWSNVVSYIIEEYRCGRTPNPDVLCN 182
           NFWSECPWE+DLKYAKAVC+QVDVPLEVVHLTDEYW NVVSYIIEEYRCGRTPNPDVLCN
Sbjct: 125 NFWSECPWEDDLKYAKAVCDQVDVPLEVVHLTDEYWKNVVSYIIEEYRCGRTPNPDVLCN 184

Query: 183 TRIKFGAFMDAISSMGFDFVASGHYAKVVHPFTDRTDGPSVLQLSKDMVKDQTYFLSHLS 362
           TRIKFGAFMDAISS  FD+VASGHYA VVH FTD+ D PSVL+LSKDMVKDQTYFLSHLS
Sbjct: 185 TRIKFGAFMDAISSKEFDYVASGHYANVVHSFTDQMDKPSVLELSKDMVKDQTYFLSHLS 244

Query: 363 QTQLKRLIFPLGCVPKVRIQS 425
           Q QLKRLIFPLGC+PK  ++S
Sbjct: 245 QIQLKRLIFPLGCIPKDEVRS 265



 Score =  142 bits (359), Expect(2) = e-105
 Identities = 65/79 (82%), Positives = 69/79 (87%)
 Frame = +2

Query: 416 DTVRKIAKNFDLPNQVRKDSQGICFLGKIKFSEFVERHIGETEGVILEAETGDFLGKHRG 595
           D VR +A   DLPN+ RKDSQGICFLGKIKFSEFV RHIGE EG+ILEAETGD LGKHRG
Sbjct: 261 DEVRSLATKLDLPNRDRKDSQGICFLGKIKFSEFVARHIGEKEGIILEAETGDLLGKHRG 320

Query: 596 FWFYTVGQRQGLRLSGGPW 652
           FWFYT+GQRQGLRL GGPW
Sbjct: 321 FWFYTIGQRQGLRLPGGPW 339


>ref|XP_004142116.1| PREDICTED: tRNA-specific 2-thiouridylase MnmA-like [Cucumis
           sativus] gi|449524848|ref|XP_004169433.1| PREDICTED:
           tRNA-specific 2-thiouridylase MnmA-like [Cucumis
           sativus]
          Length = 538

 Score =  258 bits (660), Expect(2) = e-104
 Identities = 117/140 (83%), Positives = 130/140 (92%)
 Frame = +3

Query: 3   NFWSECPWEEDLKYAKAVCNQVDVPLEVVHLTDEYWSNVVSYIIEEYRCGRTPNPDVLCN 182
           NFWSECPW++DLKYAKAVC+QVDVPLEVVHLT+EYW NVVSYIIEEYRCGRTPNPDVLCN
Sbjct: 123 NFWSECPWDDDLKYAKAVCDQVDVPLEVVHLTEEYWRNVVSYIIEEYRCGRTPNPDVLCN 182

Query: 183 TRIKFGAFMDAISSMGFDFVASGHYAKVVHPFTDRTDGPSVLQLSKDMVKDQTYFLSHLS 362
           TRIKFGAFMDAIS+M FD+VASGHYA V+HP  D+ D PSVL+LSKDMVKDQTYFLSHLS
Sbjct: 183 TRIKFGAFMDAISNMEFDYVASGHYANVIHPSADQMDKPSVLELSKDMVKDQTYFLSHLS 242

Query: 363 QTQLKRLIFPLGCVPKVRIQ 422
           Q QLKRL+FPLGC+PK  ++
Sbjct: 243 QNQLKRLLFPLGCIPKDEVR 262



 Score =  146 bits (368), Expect(2) = e-104
 Identities = 67/79 (84%), Positives = 72/79 (91%)
 Frame = +2

Query: 416 DTVRKIAKNFDLPNQVRKDSQGICFLGKIKFSEFVERHIGETEGVILEAETGDFLGKHRG 595
           D VRK+A  F+LPN+ RKDSQGICFLGKIKFSEFV RHIGE EGVILEAE+GDFLGKHRG
Sbjct: 259 DEVRKLAAKFNLPNKDRKDSQGICFLGKIKFSEFVARHIGEDEGVILEAESGDFLGKHRG 318

Query: 596 FWFYTVGQRQGLRLSGGPW 652
           FWFYT+GQRQGLRL GGPW
Sbjct: 319 FWFYTIGQRQGLRLPGGPW 337


>ref|XP_003539065.1| PREDICTED: tRNA-specific 2-thiouridylase mnmA-like [Glycine max]
          Length = 488

 Score =  254 bits (648), Expect(2) = e-103
 Identities = 114/140 (81%), Positives = 129/140 (92%)
 Frame = +3

Query: 3   NFWSECPWEEDLKYAKAVCNQVDVPLEVVHLTDEYWSNVVSYIIEEYRCGRTPNPDVLCN 182
           NFWSECPWE+DLKYAK VCNQVDVPLEVVHLTDEYW+NVVSY+IEEY  GRTPNPDVLCN
Sbjct: 103 NFWSECPWEDDLKYAKDVCNQVDVPLEVVHLTDEYWNNVVSYLIEEYSSGRTPNPDVLCN 162

Query: 183 TRIKFGAFMDAISSMGFDFVASGHYAKVVHPFTDRTDGPSVLQLSKDMVKDQTYFLSHLS 362
           TRIKFGAF+DAI  MGFD+VASGHYA V+HP +DR D PSVL+LS+DMVKDQTYFLSHLS
Sbjct: 163 TRIKFGAFLDAIGGMGFDYVASGHYANVIHPCSDRRDEPSVLELSQDMVKDQTYFLSHLS 222

Query: 363 QTQLKRLIFPLGCVPKVRIQ 422
           Q+QLK+L+FPLGC+PK  ++
Sbjct: 223 QSQLKQLLFPLGCIPKDEVR 242



 Score =  148 bits (374), Expect(2) = e-103
 Identities = 68/79 (86%), Positives = 72/79 (91%)
 Frame = +2

Query: 416 DTVRKIAKNFDLPNQVRKDSQGICFLGKIKFSEFVERHIGETEGVILEAETGDFLGKHRG 595
           D VRK+A  FDLPN+ RKDSQGICFLGKI+FSEFV RHIGE EGVILEAETGDFLGKHRG
Sbjct: 239 DEVRKLATKFDLPNKDRKDSQGICFLGKIRFSEFVARHIGEREGVILEAETGDFLGKHRG 298

Query: 596 FWFYTVGQRQGLRLSGGPW 652
           FWFYT+GQRQGLRL GGPW
Sbjct: 299 FWFYTIGQRQGLRLPGGPW 317


>ref|XP_002298404.1| predicted protein [Populus trichocarpa] gi|222845662|gb|EEE83209.1|
           predicted protein [Populus trichocarpa]
          Length = 434

 Score =  253 bits (645), Expect(2) = e-102
 Identities = 114/141 (80%), Positives = 130/141 (92%)
 Frame = +3

Query: 3   NFWSECPWEEDLKYAKAVCNQVDVPLEVVHLTDEYWSNVVSYIIEEYRCGRTPNPDVLCN 182
           NFWSECPWEEDLK+AK VC+QV VPLEVVHLTDEYWSNVVSYIIEEYRCGRTPNPDVLCN
Sbjct: 49  NFWSECPWEEDLKFAKGVCDQVGVPLEVVHLTDEYWSNVVSYIIEEYRCGRTPNPDVLCN 108

Query: 183 TRIKFGAFMDAISSMGFDFVASGHYAKVVHPFTDRTDGPSVLQLSKDMVKDQTYFLSHLS 362
           TRIKFGAFMDAI++M FD+VASGHYA V+HP +D+ + PSVL+LSKD +KDQTYFLSHL+
Sbjct: 109 TRIKFGAFMDAINNMEFDYVASGHYAHVIHPVSDQINKPSVLELSKDKLKDQTYFLSHLT 168

Query: 363 QTQLKRLIFPLGCVPKVRIQS 425
           Q QLKRLIFPLGC+PK  +++
Sbjct: 169 QAQLKRLIFPLGCIPKEEVRN 189



 Score =  144 bits (362), Expect(2) = e-102
 Identities = 66/79 (83%), Positives = 71/79 (89%)
 Frame = +2

Query: 416 DTVRKIAKNFDLPNQVRKDSQGICFLGKIKFSEFVERHIGETEGVILEAETGDFLGKHRG 595
           + VR +A  FDLPN+ RKDSQGICFLGKIKFSEFV RHIGE+EGVILEAETGDFLG HRG
Sbjct: 185 EEVRNLASKFDLPNKDRKDSQGICFLGKIKFSEFVGRHIGESEGVILEAETGDFLGIHRG 244

Query: 596 FWFYTVGQRQGLRLSGGPW 652
           FWFYT+GQRQGLRL GGPW
Sbjct: 245 FWFYTIGQRQGLRLPGGPW 263


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