BLASTX nr result

ID: Panax21_contig00020405 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00020405
         (2065 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278796.2| PREDICTED: homeobox protein ATH1 [Vitis vini...   353   1e-94
ref|XP_002516458.1| bel1 homeotic protein, putative [Ricinus com...   294   7e-77
emb|CBI20629.3| unnamed protein product [Vitis vinifera]              237   1e-59
ref|XP_002324760.1| predicted protein [Populus trichocarpa] gi|2...   222   3e-55
ref|XP_004159574.1| PREDICTED: homeobox protein ATH1-like [Cucum...   219   2e-54

>ref|XP_002278796.2| PREDICTED: homeobox protein ATH1 [Vitis vinifera]
          Length = 514

 Score =  353 bits (905), Expect = 1e-94
 Identities = 218/512 (42%), Positives = 280/512 (54%), Gaps = 10/512 (1%)
 Frame = -2

Query: 1506 MDNDVFNVPLDMVCQNPIIVSGNISHSTSVSHVXXXXXXXXXXXQIMAGFPTLSMMQXXX 1327
            M+ND+FNVP+D+  +N +++ G  SH ++ S +           Q M G P L M+Q   
Sbjct: 1    MENDMFNVPMDIAGRNHVVMDGVSSHMSTNSLIQSDLFHLNSQNQFMIGLPVLPMLQGET 60

Query: 1326 XXXXXXXXHFASHAGTSSALGPRSSQLERTVIGDTSIGRSCSISNIDVQDRFMAGMPIXX 1147
                        HA       P     +  V  ++S+G++C I + + Q++F     I  
Sbjct: 61   INGL--------HADFQMTSRPAIVDSDELVSRNSSLGQACPIGSTNGQEQFNEVTTISA 112

Query: 1146 XXXXXXXXARYGPHGNLNDIEMLAHSAHHREVSDSFVSNDYSDTVQSSLGTSVNYGYDGM 967
                     + G H NL+++ + A S    E   +FVS+D S+T  SSL TSV+  YDG+
Sbjct: 113  SSLATLLATKSGLHENLDNLAISATSVFPSEDLRTFVSSDCSNTSNSSLATSVDCPYDGV 172

Query: 966  LGDLSSKWDFHKF-PAPQLGGTVAQRTELEPFQTMGSMDQNGWISSENXXXXXXXXXXXX 790
            L D++ KW F KF P+P+L G    RT  +PF  +G MD NGWISS              
Sbjct: 173  LSDMTRKWGFDKFLPSPELTGKTTLRTGFQPFHIIGDMDPNGWISSS----ADTRTVPPY 228

Query: 789  XXXXXXXXXXXTCQPSVICGTTIQEHCXXXXXXXXXXXXXXXXXXXXEQTSSNGKNLSLS 610
                       T QPSV+CG T    C                    EQ S N K LSLS
Sbjct: 229  GSSNELSLSLATSQPSVMCGATAPNQCSERSCSGVTHPCLNEVGLGSEQGSCNSKELSLS 288

Query: 609  FG-YKPVQVSQMLCGSRFLNEMQEILSEIASYSLGNSGHLSYPTSGTGAGEIFSFSLSRS 433
            FG Y+P Q SQ++ GSR+L+ +QEIL+EI +YSL N  H  Y T+ TG       S   +
Sbjct: 289  FGSYRPAQFSQVISGSRYLHVIQEILAEILNYSLENLDHSIYSTTRTGGQANVQLSSGYA 348

Query: 432  AGRSYYTAMGPDDLPDCN-------DTMLCEREVKAKKKHMLDLLQMVDSRYTQCLDEIH 274
            A R   + MG D+ PD +       D +L +REV+AKK  +L LLQ+VD +Y QCLDEIH
Sbjct: 349  AQRGL-SVMGSDEFPDEDGRYAVPMDPVLQKREVEAKKTQLLALLQVVDDQYNQCLDEIH 407

Query: 273  KVISAFHAVTELDPQIHTRFALQTISFLYKNLRDRISNYILAMGAHL-NXXXXXXXXRSF 97
             VISAFHA TELDPQIH RFAL TIS LYKNLR+RISN ILAMG    N          F
Sbjct: 408  TVISAFHAATELDPQIHARFALHTISLLYKNLRERISNQILAMGTRFTNGCTSEKERPPF 467

Query: 96   ETSFIKKQWALQQLRRKDHQLWRPQRGLPEKS 1
            E+SFI+KQW LQQLRRKDHQLWRPQRGLPE+S
Sbjct: 468  ESSFIQKQWDLQQLRRKDHQLWRPQRGLPERS 499


>ref|XP_002516458.1| bel1 homeotic protein, putative [Ricinus communis]
            gi|223544278|gb|EEF45799.1| bel1 homeotic protein,
            putative [Ricinus communis]
          Length = 504

 Score =  294 bits (752), Expect = 7e-77
 Identities = 199/513 (38%), Positives = 272/513 (53%), Gaps = 11/513 (2%)
 Frame = -2

Query: 1506 MDNDVFNVPLDMVCQNPIIVSGNISHSTSVSHVXXXXXXXXXXXQIMAGFPTLSMMQXXX 1327
            M+N +FNVPLDM+ +N + V G  S  T  S V           Q + G+  LS ++   
Sbjct: 1    MENRLFNVPLDMIGRNSMTVEGIGSQITPNSLVQFDSFDLNNQNQTLDGYTVLSALRGVP 60

Query: 1326 XXXXXXXXHFASHAGTSSALGPRSSQLERTVIGDTSIGRSCSISNIDVQDRFMAGMPIXX 1147
                        H+ + +A+    + +       TS+GR  +  + + Q++F+ G PI  
Sbjct: 61   MHDL--------HSDSQAAIEDSEAFV-------TSLGRDVA-RDTEFQEQFVGGTPISA 104

Query: 1146 XXXXXXXXARYGPHGNLNDIEMLAHSAHHREVSDSFVSNDYSDTVQSSLGTSVNYGYDGM 967
                    +R     N   + +   S +  EV  ++   D+S+ + SS  +S+NYG   +
Sbjct: 105  PALATIVASRSSLQENPTHLAISEPSIYPLEVLRTY---DFSNDLNSSFASSMNYGCHEV 161

Query: 966  LGDLSSKWDFHKFPAP-QLGGTVAQRTELEPFQTMGSMDQNGWISSENXXXXXXXXXXXX 790
             G+++SK   +KFP P +LGG    R+  +P+ +MG+++ N WISS +            
Sbjct: 162  YGNMNSK--DNKFPTPVELGGKTPIRSGFQPYSSMGNLEPNSWISSNSVNLSADNAYGSC 219

Query: 789  XXXXXXXXXXXTCQPSVICGTTIQEHCXXXXXXXXXXXXXXXXXXXXEQTSSNGKNLSLS 610
                       T Q S I GT I + C                    EQTSS+ K LSLS
Sbjct: 220  NFSNELSLSLATSQHSAINGTQIPDQCSEISCSGVTHHCLKESRVGSEQTSSSSKELSLS 279

Query: 609  FG-YKPVQVSQMLCGSRFLNEMQEILSEIASYSLGNSGHLSYPTSG--TGAGEIFSFSLS 439
             G Y+  Q SQ++ GSRFL  +QEIL++IASYSL N   + Y   G  TGA   F  S  
Sbjct: 280  CGSYRTGQFSQVISGSRFLQVIQEILAQIASYSLENLDQMIYSAGGIKTGANISFYSSYP 339

Query: 438  RSAGRSYYTAMGPDDLPDCN-------DTMLCEREVKAKKKHMLDLLQMVDSRYTQCLDE 280
               G      MG  + P+ +       D  L +R + AKK  +L LLQ+VD RY QCLDE
Sbjct: 340  MEGGMRL---MGSLESPNEDNRFKAQVDPALQKRALAAKKTQLLTLLQVVDDRYNQCLDE 396

Query: 279  IHKVISAFHAVTELDPQIHTRFALQTISFLYKNLRDRISNYILAMGAHLNXXXXXXXXRS 100
            IH V+SAFHA TELDPQIHTRFALQTISFLYK+LR+RISN ILAMGAH +         S
Sbjct: 397  IHTVVSAFHAATELDPQIHTRFALQTISFLYKSLRERISNQILAMGAHFDGGGATDTEGS 456

Query: 99   FETSFIKKQWALQQLRRKDHQLWRPQRGLPEKS 1
             E+ + +KQWALQQL++KDHQLWRPQRGLPE+S
Sbjct: 457  LESCYFQKQWALQQLKKKDHQLWRPQRGLPERS 489


>emb|CBI20629.3| unnamed protein product [Vitis vinifera]
          Length = 344

 Score =  237 bits (604), Expect = 1e-59
 Identities = 136/255 (53%), Positives = 160/255 (62%), Gaps = 9/255 (3%)
 Frame = -2

Query: 738 ICGTTIQEHCXXXXXXXXXXXXXXXXXXXXEQTSSNGKNLSLSFG-YKPVQVSQMLCGSR 562
           +CG T    C                    EQ S N K LSLSFG Y+P Q SQ++ GSR
Sbjct: 1   MCGATAPNQCSERSCSGVTHPCLNEVGLGSEQGSCNSKELSLSFGSYRPAQFSQVISGSR 60

Query: 561 FLNEMQEILSEIASYSLGNSGHLSYPTSGTGAGEIFSFSLSRSAGRSYYTAMGPDDLPDC 382
           +L+ +QEIL+EI +YSL N  H  Y T+ TG       S   +A R   + MG D+ PD 
Sbjct: 61  YLHVIQEILAEILNYSLENLDHSIYSTTRTGGQANVQLSSGYAAQRGL-SVMGSDEFPDE 119

Query: 381 N-------DTMLCEREVKAKKKHMLDLLQMVDSRYTQCLDEIHKVISAFHAVTELDPQIH 223
           +       D +L +REV+AKK  +L LLQ+VD +Y QCLDEIH VISAFHA TELDPQIH
Sbjct: 120 DGRYAVPMDPVLQKREVEAKKTQLLALLQVVDDQYNQCLDEIHTVISAFHAATELDPQIH 179

Query: 222 TRFALQTISFLYKNLRDRISNYILAMGAHL-NXXXXXXXXRSFETSFIKKQWALQQLRRK 46
            RFAL TIS LYKNLR+RISN ILAMG    N          FE+SFI+KQW LQQLRRK
Sbjct: 180 ARFALHTISLLYKNLRERISNQILAMGTRFTNGCTSEKERPPFESSFIQKQWDLQQLRRK 239

Query: 45  DHQLWRPQRGLPEKS 1
           DHQLWRPQRGLPE+S
Sbjct: 240 DHQLWRPQRGLPERS 254


>ref|XP_002324760.1| predicted protein [Populus trichocarpa] gi|222866194|gb|EEF03325.1|
           predicted protein [Populus trichocarpa]
          Length = 323

 Score =  222 bits (566), Expect = 3e-55
 Identities = 126/216 (58%), Positives = 151/216 (69%), Gaps = 1/216 (0%)
 Frame = -2

Query: 645 QTSSNGKNLSLSFG-YKPVQVSQMLCGSRFLNEMQEILSEIASYSLGNSGHLSYPTSGTG 469
           QTS + K LSLS   YK  Q SQ+L GSR+L+ +QEIL++IASYSL N          TG
Sbjct: 32  QTSCSSKELSLSCSSYKTGQSSQVLLGSRYLHVIQEILAQIASYSLENLDQ----GFKTG 87

Query: 468 AGEIFSFSLSRSAGRSYYTAMGPDDLPDCNDTMLCEREVKAKKKHMLDLLQMVDSRYTQC 289
           A  +FS S +   G      MG D  PD     L +R ++AK+  +L LLQ+VD RY+QC
Sbjct: 88  ASTLFSSSYAMEGGMPL---MGFDKSPDGT---LQKRALEAKRTQLLTLLQVVDERYSQC 141

Query: 288 LDEIHKVISAFHAVTELDPQIHTRFALQTISFLYKNLRDRISNYILAMGAHLNXXXXXXX 109
           LDEIH VISAFHA TELDPQIHTRF+LQTISFLYK LR+RISN ILAMGAHL+       
Sbjct: 142 LDEIHTVISAFHAATELDPQIHTRFSLQTISFLYKRLRERISNQILAMGAHLDSGDTIET 201

Query: 108 XRSFETSFIKKQWALQQLRRKDHQLWRPQRGLPEKS 1
             SF TS+++KQW LQQL++ DHQLWRPQRGLPE+S
Sbjct: 202 EGSFGTSYLQKQWTLQQLKKNDHQLWRPQRGLPERS 237


>ref|XP_004159574.1| PREDICTED: homeobox protein ATH1-like [Cucumis sativus]
          Length = 486

 Score =  219 bits (558), Expect = 2e-54
 Identities = 146/424 (34%), Positives = 215/424 (50%), Gaps = 5/424 (1%)
 Frame = -2

Query: 1257 SSQLERTVIGDTSIGRSCSISNIDVQDRFMAGMPIXXXXXXXXXXARYGPHGNLNDIEML 1078
            S+ L+R  +GD  +G S    N + Q++    +PI                GN+ D    
Sbjct: 2    STALQRIDMGDACLGPS---GNAEFQNQLAVAIPISLFQSTSLAPVN-DIRGNIKDSAFP 57

Query: 1077 AHSAHHREVSDSFVSNDYSDTVQSSLGTSVNYGYDGMLGDLSSKWDFHKFPA-PQLGGTV 901
                   E   +   + YS+   SS  +S+    D  L + ++KW+  +F    QL G  
Sbjct: 58   DPQFQQLETFRTCFLHSYSNASNSSFASSLICEGDESLCNANNKWESDRFHCIQQLSGEN 117

Query: 900  AQRTELEPFQTMGSMDQNGWISSENXXXXXXXXXXXXXXXXXXXXXXXTCQPSVICGTTI 721
             + ++ +   +M  + QNGW+SS                           +P +  GT  
Sbjct: 118  PETSDSQTVLSMEHLHQNGWMSSNTMNSKLWNELSLSLATT---------EPVLSGGTDF 168

Query: 720  QEHCXXXXXXXXXXXXXXXXXXXXEQTSSNGKNLSLSFGY-KPVQVSQMLCGSRFLNEMQ 544
             +                         S + ++LSLS+G    V++S+ + GSR+L+ +Q
Sbjct: 169  LDQYSQLTFSGATQPCLNSTELASNLNSGSSRDLSLSYGCGNSVRLSRAIAGSRYLSVIQ 228

Query: 543  EILSEIASYSLGNSGHLSYPTSGTGAGEIFSFSLSRSAGRSYYTAMGPDDLPDCNDTMLC 364
            ++LS+IASY L NS  + + T+ TG   + S S    A   Y    G D     +  M  
Sbjct: 229  DVLSQIASYPLENSDQVDHSTTATGFVPLSSSSSLDDATIEY----GSDVTGRYSSQMEP 284

Query: 363  ERE---VKAKKKHMLDLLQMVDSRYTQCLDEIHKVISAFHAVTELDPQIHTRFALQTISF 193
            E +   V AKK H+L LLQ++D RYTQCLDEIH V SAFHA T+LDP++HTR+ LQTI+ 
Sbjct: 285  EWQNLSVDAKKSHLLTLLQLIDERYTQCLDEIHTVTSAFHAATDLDPRLHTRYTLQTITS 344

Query: 192  LYKNLRDRISNYILAMGAHLNXXXXXXXXRSFETSFIKKQWALQQLRRKDHQLWRPQRGL 13
            +YKNLR++I++ I A+G H N        + FE +F++KQWALQQL+RKD+QLWRPQRGL
Sbjct: 345  VYKNLREKITSCIFAIGKHSNATCTKEKEKFFEATFLQKQWALQQLKRKDNQLWRPQRGL 404

Query: 12   PEKS 1
            PEKS
Sbjct: 405  PEKS 408


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