BLASTX nr result

ID: Panax21_contig00020402 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00020402
         (395 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|JAA73542.1| Hypothetical protein, partial [Ixodes ricinus]          72   4e-11
ref|XP_002515462.1| hypothetical protein RCOM_0922570 [Ricinus c...    71   1e-10
ref|NP_196664.3| Aberrant root formation protein 4 [Arabidopsis ...    70   2e-10
sp|Q84VX3.2|ALF4_ARATH RecName: Full=Aberrant root formation pro...    70   2e-10
ref|NP_001154705.1| Aberrant root formation protein 4 [Arabidops...    70   2e-10

>gb|JAA73542.1| Hypothetical protein, partial [Ixodes ricinus]
          Length = 215

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 31/54 (57%), Positives = 43/54 (79%)
 Frame = -3

Query: 273 DFSKEVMDALSFELPKAVARFSSASKRCISVSEGIIDRFVVSCSPRNMLSILCE 112
           +  ++++DAL+FELPKA ARF+  S RC  V+EG++D FV  CSPR+MLSI+CE
Sbjct: 5   EVKQDIVDALAFELPKAAARFACVSTRCSEVAEGVVDLFVSRCSPRDMLSIICE 58


>ref|XP_002515462.1| hypothetical protein RCOM_0922570 [Ricinus communis]
           gi|223545406|gb|EEF46911.1| hypothetical protein
           RCOM_0922570 [Ricinus communis]
          Length = 196

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 29/51 (56%), Positives = 44/51 (86%)
 Frame = -3

Query: 264 KEVMDALSFELPKAVARFSSASKRCISVSEGIIDRFVVSCSPRNMLSILCE 112
           +EV+DALSF+LPKA ++F+  S +C+ +++ IIDRF+ +CSPR+MLS+LCE
Sbjct: 83  QEVIDALSFDLPKATSKFAGLSGKCLEIADRIIDRFIETCSPRDMLSVLCE 133


>ref|NP_196664.3| Aberrant root formation protein 4 [Arabidopsis thaliana]
           gi|28416705|gb|AAO42883.1| At5g11030 [Arabidopsis
           thaliana] gi|110743215|dbj|BAE99498.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|332004242|gb|AED91625.1| Aberrant root formation
           protein 4 [Arabidopsis thaliana]
          Length = 578

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 31/62 (50%), Positives = 45/62 (72%)
 Frame = -3

Query: 297 LLNVIIDFDFSKEVMDALSFELPKAVARFSSASKRCISVSEGIIDRFVVSCSPRNMLSIL 118
           +L V+      ++V+DALSF LPK  ++F+  S RC+ + E I+DRFV +C+PR+MLSIL
Sbjct: 80  ILKVLSSPQMDQDVIDALSFHLPKVTSKFADISSRCLQLVEEIVDRFVEACNPRDMLSIL 139

Query: 117 CE 112
           CE
Sbjct: 140 CE 141


>sp|Q84VX3.2|ALF4_ARATH RecName: Full=Aberrant root formation protein 4
          Length = 626

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 31/62 (50%), Positives = 45/62 (72%)
 Frame = -3

Query: 297 LLNVIIDFDFSKEVMDALSFELPKAVARFSSASKRCISVSEGIIDRFVVSCSPRNMLSIL 118
           +L V+      ++V+DALSF LPK  ++F+  S RC+ + E I+DRFV +C+PR+MLSIL
Sbjct: 104 ILKVLSSPQMDQDVIDALSFHLPKVTSKFADISSRCLQLVEEIVDRFVEACNPRDMLSIL 163

Query: 117 CE 112
           CE
Sbjct: 164 CE 165


>ref|NP_001154705.1| Aberrant root formation protein 4 [Arabidopsis thaliana]
           gi|332004244|gb|AED91627.1| Aberrant root formation
           protein 4 [Arabidopsis thaliana]
          Length = 574

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 31/62 (50%), Positives = 45/62 (72%)
 Frame = -3

Query: 297 LLNVIIDFDFSKEVMDALSFELPKAVARFSSASKRCISVSEGIIDRFVVSCSPRNMLSIL 118
           +L V+      ++V+DALSF LPK  ++F+  S RC+ + E I+DRFV +C+PR+MLSIL
Sbjct: 80  ILKVLSSPQMDQDVIDALSFHLPKVTSKFADISSRCLQLVEEIVDRFVEACNPRDMLSIL 139

Query: 117 CE 112
           CE
Sbjct: 140 CE 141


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