BLASTX nr result

ID: Panax21_contig00020398 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00020398
         (648 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004172420.1| PREDICTED: histidine--tRNA ligase-like [Cucu...    70   4e-10
ref|XP_004138662.1| PREDICTED: histidine--tRNA ligase-like [Cucu...    70   4e-10
ref|XP_002271456.2| PREDICTED: histidyl-tRNA synthetase-like [Vi...    62   7e-08

>ref|XP_004172420.1| PREDICTED: histidine--tRNA ligase-like [Cucumis sativus]
          Length = 879

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 53/149 (35%), Positives = 72/149 (48%), Gaps = 1/149 (0%)
 Frame = +3

Query: 204 VITLGGKGSSLSSPAVFEVANSISLLRIDSSAKFXXXXXXXXXXXXXXYFPNYHFSLPDY 383
           VITLGGKGSSLSS +V+ +A+  +L+RIDSSA                    +H  +PD+
Sbjct: 9   VITLGGKGSSLSSSSVYAIAHGFALVRIDSSALDRLSSSSNNPNAASI---KHHLLIPDF 65

Query: 384 LTLEEXXXXXXXXXXXXXXXXXXXISVAHATVAASLLLDTLN-RPDLSSFTDEDYESLNP 560
           LT EE                   I     +V   L+ +TLN +P+   F  E  +  N 
Sbjct: 66  LTREEARASLVVLLNKLIISSSSGI----RSVIPVLIAETLNSKPETLQF--ESLDVTNE 119

Query: 561 ILGCCSVDAAALHGVCALLDHGSSALASI 647
            L         L+GVCALLDH S+AL+S+
Sbjct: 120 ELSVFKQSCYVLNGVCALLDHQSTALSSV 148


>ref|XP_004138662.1| PREDICTED: histidine--tRNA ligase-like [Cucumis sativus]
          Length = 879

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 53/149 (35%), Positives = 72/149 (48%), Gaps = 1/149 (0%)
 Frame = +3

Query: 204 VITLGGKGSSLSSPAVFEVANSISLLRIDSSAKFXXXXXXXXXXXXXXYFPNYHFSLPDY 383
           VITLGGKGSSLSS +V+ +A+  +L+RIDSSA                    +H  +PD+
Sbjct: 9   VITLGGKGSSLSSSSVYAIAHGFALVRIDSSALDRLSSSSNNPNAASI---KHHLLIPDF 65

Query: 384 LTLEEXXXXXXXXXXXXXXXXXXXISVAHATVAASLLLDTLN-RPDLSSFTDEDYESLNP 560
           LT EE                   I     +V   L+ +TLN +P+   F  E  +  N 
Sbjct: 66  LTREEARASLVVLLNKLIISSSSGI----RSVIPVLITETLNSKPETLQF--ESLDVTNE 119

Query: 561 ILGCCSVDAAALHGVCALLDHGSSALASI 647
            L         L+GVCALLDH S+AL+S+
Sbjct: 120 ELSVFKQSCYVLNGVCALLDHQSTALSSV 148


>ref|XP_002271456.2| PREDICTED: histidyl-tRNA synthetase-like [Vitis vinifera]
          Length = 890

 Score = 62.4 bits (150), Expect = 7e-08
 Identities = 51/155 (32%), Positives = 70/155 (45%)
 Frame = +3

Query: 183 KSCNSGRVITLGGKGSSLSSPAVFEVANSISLLRIDSSAKFXXXXXXXXXXXXXXYFPNY 362
           K+     VITLGGKGSSLS+ +VF VAN ++ +RIDSS                      
Sbjct: 4   KNPKPSSVITLGGKGSSLSAASVFAVANGLAQVRIDSSILDKLNSSSSNRKSPPV---KC 60

Query: 363 HFSLPDYLTLEEXXXXXXXXXXXXXXXXXXXISVAHATVAASLLLDTLNRPDLSSFTDED 542
           H  +P  LTLEE                   +S + + V   L+ + LN    +    E 
Sbjct: 61  HIPIPKILTLEE------SRAFLLALLNKLLLSGSASPVLPVLISEILNTGSKALDLGEV 114

Query: 543 YESLNPILGCCSVDAAALHGVCALLDHGSSALASI 647
             S   + G      A+LHG+C +LDH SSAL++I
Sbjct: 115 EVSAEEV-GVLEKTCASLHGICGILDHESSALSTI 148


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