BLASTX nr result

ID: Panax21_contig00020391 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00020391
         (679 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270988.2| PREDICTED: threonyl-tRNA synthetase-like [Vi...   224   1e-56
emb|CBI28402.3| unnamed protein product [Vitis vinifera]              224   1e-56
emb|CAN65674.1| hypothetical protein VITISV_002009 [Vitis vinifera]   224   1e-56
gb|ADK92877.1| threonyl-tRNA synthetase [Hypericum perforatum]        219   5e-55
ref|XP_004144536.1| PREDICTED: threonine--tRNA ligase-like [Cucu...   217   2e-54

>ref|XP_002270988.2| PREDICTED: threonyl-tRNA synthetase-like [Vitis vinifera]
          Length = 670

 Score =  224 bits (571), Expect = 1e-56
 Identities = 109/133 (81%), Positives = 123/133 (92%), Gaps = 5/133 (3%)
 Frame = +3

Query: 294 ATDSSETAVVTK-----EVPEEKIVLPTNQSSEKLLRIRHTCAHVMAMAVQKVFPDAKVT 458
           +TDS+++AV+       E P EKIVLPTN+SSE+LLRIRHTCAHVMAMAVQK+FPDAKVT
Sbjct: 65  STDSTDSAVLADDKGLGEAPPEKIVLPTNESSERLLRIRHTCAHVMAMAVQKLFPDAKVT 124

Query: 459 IGPWIENGFYYDFDMEPLTDKDLKRIKKEMDRIIGRNLPLVREEVTRDEAQKRITAINEP 638
           IGPWIENGFYYDFDMEPLTDKDLKRIKKEMDRIIGRNLPL+REEV+RDEAQ+RI A+NEP
Sbjct: 125 IGPWIENGFYYDFDMEPLTDKDLKRIKKEMDRIIGRNLPLIREEVSRDEAQRRIMAVNEP 184

Query: 639 YKMEILESIKEDP 677
           YKMEIL+SI+EDP
Sbjct: 185 YKMEILDSIQEDP 197


>emb|CBI28402.3| unnamed protein product [Vitis vinifera]
          Length = 688

 Score =  224 bits (571), Expect = 1e-56
 Identities = 109/133 (81%), Positives = 123/133 (92%), Gaps = 5/133 (3%)
 Frame = +3

Query: 294 ATDSSETAVVTK-----EVPEEKIVLPTNQSSEKLLRIRHTCAHVMAMAVQKVFPDAKVT 458
           +TDS+++AV+       E P EKIVLPTN+SSE+LLRIRHTCAHVMAMAVQK+FPDAKVT
Sbjct: 72  STDSTDSAVLADDKGLGEAPPEKIVLPTNESSERLLRIRHTCAHVMAMAVQKLFPDAKVT 131

Query: 459 IGPWIENGFYYDFDMEPLTDKDLKRIKKEMDRIIGRNLPLVREEVTRDEAQKRITAINEP 638
           IGPWIENGFYYDFDMEPLTDKDLKRIKKEMDRIIGRNLPL+REEV+RDEAQ+RI A+NEP
Sbjct: 132 IGPWIENGFYYDFDMEPLTDKDLKRIKKEMDRIIGRNLPLIREEVSRDEAQRRIMAVNEP 191

Query: 639 YKMEILESIKEDP 677
           YKMEIL+SI+EDP
Sbjct: 192 YKMEILDSIQEDP 204


>emb|CAN65674.1| hypothetical protein VITISV_002009 [Vitis vinifera]
          Length = 1260

 Score =  224 bits (571), Expect = 1e-56
 Identities = 109/133 (81%), Positives = 123/133 (92%), Gaps = 5/133 (3%)
 Frame = +3

Query: 294 ATDSSETAVVTK-----EVPEEKIVLPTNQSSEKLLRIRHTCAHVMAMAVQKVFPDAKVT 458
           +TDS+++AV+       E P EKIVLPTN+SSE+LLRIRHTCAHVMAMAVQK+FPDAKVT
Sbjct: 72  STDSTDSAVLADDKGLGEAPPEKIVLPTNESSERLLRIRHTCAHVMAMAVQKLFPDAKVT 131

Query: 459 IGPWIENGFYYDFDMEPLTDKDLKRIKKEMDRIIGRNLPLVREEVTRDEAQKRITAINEP 638
           IGPWIENGFYYDFDMEPLTDKDLKRIKKEMDRIIGRNLPL+REEV+RDEAQ+RI A+NEP
Sbjct: 132 IGPWIENGFYYDFDMEPLTDKDLKRIKKEMDRIIGRNLPLIREEVSRDEAQRRIMAVNEP 191

Query: 639 YKMEILESIKEDP 677
           YKMEIL+SI+EDP
Sbjct: 192 YKMEILDSIQEDP 204


>gb|ADK92877.1| threonyl-tRNA synthetase [Hypericum perforatum]
          Length = 721

 Score =  219 bits (557), Expect = 5e-55
 Identities = 107/136 (78%), Positives = 124/136 (91%), Gaps = 6/136 (4%)
 Frame = +3

Query: 288 SVATDSSETAVVTKE------VPEEKIVLPTNQSSEKLLRIRHTCAHVMAMAVQKVFPDA 449
           +VAT+SS+TA V         + EE+IVLPTNQSS++LL+IRHTCAHVMAMAVQK++PDA
Sbjct: 103 AVATESSQTATVEDTQKPEPVLTEERIVLPTNQSSDRLLKIRHTCAHVMAMAVQKLYPDA 162

Query: 450 KVTIGPWIENGFYYDFDMEPLTDKDLKRIKKEMDRIIGRNLPLVREEVTRDEAQKRITAI 629
           KVTIGPWIENGFYYDFDMEPLTDK+LKRIKKEMDRIIGRNLPLVREEV+RDEAQ+RI ++
Sbjct: 163 KVTIGPWIENGFYYDFDMEPLTDKELKRIKKEMDRIIGRNLPLVREEVSRDEAQRRIMSV 222

Query: 630 NEPYKMEILESIKEDP 677
           NEPYKMEIL+SIKE+P
Sbjct: 223 NEPYKMEILDSIKEEP 238


>ref|XP_004144536.1| PREDICTED: threonine--tRNA ligase-like [Cucumis sativus]
           gi|449506889|ref|XP_004162876.1| PREDICTED:
           threonine--tRNA ligase-like [Cucumis sativus]
          Length = 672

 Score =  217 bits (552), Expect = 2e-54
 Identities = 110/138 (79%), Positives = 120/138 (86%), Gaps = 8/138 (5%)
 Frame = +3

Query: 288 SVATDSSETAVVTKEVP--------EEKIVLPTNQSSEKLLRIRHTCAHVMAMAVQKVFP 443
           SVATDSS  ++ T+            EKIVLPTN+SSEKLLRIRHTCAHVMAMAVQK+FP
Sbjct: 62  SVATDSSAPSISTQNEDLVDAHKDQTEKIVLPTNESSEKLLRIRHTCAHVMAMAVQKLFP 121

Query: 444 DAKVTIGPWIENGFYYDFDMEPLTDKDLKRIKKEMDRIIGRNLPLVREEVTRDEAQKRIT 623
           DAKVTIGPWIENGFYYDFDMEPL DKDLK+IKKEM+RII RNLPLVREEV+RDEAQ+RI 
Sbjct: 122 DAKVTIGPWIENGFYYDFDMEPLGDKDLKKIKKEMERIISRNLPLVREEVSRDEAQRRIE 181

Query: 624 AINEPYKMEILESIKEDP 677
           AINEPYKME+LESIKEDP
Sbjct: 182 AINEPYKMELLESIKEDP 199


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