BLASTX nr result

ID: Panax21_contig00020377 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00020377
         (961 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512969.1| coatomer alpha subunit, putative [Ricinus co...   630   e-178
ref|XP_002321558.1| predicted protein [Populus trichocarpa] gi|2...   627   e-178
ref|XP_002318013.1| predicted protein [Populus trichocarpa] gi|2...   626   e-177
ref|XP_002529504.1| coatomer alpha subunit, putative [Ricinus co...   621   e-176
ref|XP_004165124.1| PREDICTED: coatomer subunit alpha-1-like, pa...   621   e-176

>ref|XP_002512969.1| coatomer alpha subunit, putative [Ricinus communis]
            gi|223547980|gb|EEF49472.1| coatomer alpha subunit,
            putative [Ricinus communis]
          Length = 1217

 Score =  630 bits (1624), Expect = e-178
 Identities = 298/319 (93%), Positives = 311/319 (97%)
 Frame = +3

Query: 3    LFVSGGDDYKIKVWNYKLHRCLFTLLGHLDYIRTVQFHHEHPWIVSASDDQTIRIWNWQS 182
            LFVSGGDDYKIKVWNYK+HRCLFTLLGHLDYIRTVQFHHE+PWIVSASDDQTIRIWNWQS
Sbjct: 65   LFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQS 124

Query: 183  RTCISVLTGHNHYVMCALFHLKDDLVVSASLDQTVRVWDIGSLRKKTASPADDILRLSQI 362
            RTCISVLTGHNHYVMCA FH K+DLVVSASLDQTVRVWDIG+LRKKT SPADDILRLSQ+
Sbjct: 125  RTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDILRLSQM 184

Query: 363  NTDFFGGVDAVVKYVLEGHDRGVNWASFHPTLPLIVSGADDRQVKLWRMNDTKAWEVDTL 542
            NTD FGGVDAVVKYVLEGHDRGVNWA+FHP LPLIVSGADDRQVKLWRMNDTKAWEVDTL
Sbjct: 185  NTDLFGGVDAVVKYVLEGHDRGVNWAAFHPNLPLIVSGADDRQVKLWRMNDTKAWEVDTL 244

Query: 543  RGHMNNVSCVLFHAKQDIIVSNSEDKSIRVWDATKRTAIQTFRREHDRFWILASHPEMNL 722
            RGHMNNVSCV+FHAKQDIIVSNSEDKSIRVWD TKRT +QTFRREHDRFWILASHPEMNL
Sbjct: 245  RGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMNL 304

Query: 723  LAAGHDSGVIVFKLERERPALSVSGDSMFYAKDRFLRFYEFSTQRETQVIPIRRPGSTSL 902
            LAAGHDSG+IVFKLERERPA +VSGDS+FYAKDRFLRFYEFSTQR+TQVIPIRRPG+TSL
Sbjct: 305  LAAGHDSGMIVFKLERERPAFAVSGDSLFYAKDRFLRFYEFSTQRDTQVIPIRRPGTTSL 364

Query: 903  NQSPRTLSYSPTENAVLIC 959
            NQSPRTLSYSPTENAVLIC
Sbjct: 365  NQSPRTLSYSPTENAVLIC 383



 Score = 67.0 bits (162), Expect = 6e-09
 Identities = 35/105 (33%), Positives = 56/105 (53%)
 Frame = +3

Query: 417 HDRGVNWASFHPTLPLIVSGADDRQVKLWRMNDTKAWEVDTLRGHMNNVSCVLFHAKQDI 596
           HD  V    FH + PL VSG DD ++K+W     +   + TL GH++ +  V FH +   
Sbjct: 50  HDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKMHRC--LFTLLGHLDYIRTVQFHHEYPW 107

Query: 597 IVSNSEDKSIRVWDATKRTAIQTFRREHDRFWILASHPEMNLLAA 731
           IVS S+D++IR+W+   RT I      +      + HP+ +L+ +
Sbjct: 108 IVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVS 152


>ref|XP_002321558.1| predicted protein [Populus trichocarpa] gi|222868554|gb|EEF05685.1|
            predicted protein [Populus trichocarpa]
          Length = 1218

 Score =  627 bits (1618), Expect = e-178
 Identities = 296/319 (92%), Positives = 312/319 (97%)
 Frame = +3

Query: 3    LFVSGGDDYKIKVWNYKLHRCLFTLLGHLDYIRTVQFHHEHPWIVSASDDQTIRIWNWQS 182
            LFVSGGDDYKIKVWNYKLHRCLFTLLGHLDYIRTVQFHHE+PWIVSASDDQTIRIWNWQS
Sbjct: 65   LFVSGGDDYKIKVWNYKLHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQS 124

Query: 183  RTCISVLTGHNHYVMCALFHLKDDLVVSASLDQTVRVWDIGSLRKKTASPADDILRLSQI 362
            RTCISVLTGHNHYVMCA FH K+DLVVSASLDQTVRVWDIG+LRKKT SPADDI+RL+Q+
Sbjct: 125  RTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDIMRLTQM 184

Query: 363  NTDFFGGVDAVVKYVLEGHDRGVNWASFHPTLPLIVSGADDRQVKLWRMNDTKAWEVDTL 542
            N+D FGGVDAVVKYVLEGHDRGVNWA+FHPTLPLIVSGADDRQVKLWRMNDTKAWEVDTL
Sbjct: 185  NSDLFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNDTKAWEVDTL 244

Query: 543  RGHMNNVSCVLFHAKQDIIVSNSEDKSIRVWDATKRTAIQTFRREHDRFWILASHPEMNL 722
            RGHMNNVSCV+FHAKQDIIVSNSEDKSIRVWD TKRT +QTFRREHDRFWILASHPEMNL
Sbjct: 245  RGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMNL 304

Query: 723  LAAGHDSGVIVFKLERERPALSVSGDSMFYAKDRFLRFYEFSTQRETQVIPIRRPGSTSL 902
            LAAGHDSG+IVFKLERERPA +VSGDS+FYAKDRFLRF+EFSTQR+TQVIPIRRPG+TSL
Sbjct: 305  LAAGHDSGMIVFKLERERPAFAVSGDSLFYAKDRFLRFFEFSTQRDTQVIPIRRPGTTSL 364

Query: 903  NQSPRTLSYSPTENAVLIC 959
            NQSPRTLSYSPTENAVLIC
Sbjct: 365  NQSPRTLSYSPTENAVLIC 383



 Score = 66.6 bits (161), Expect = 8e-09
 Identities = 35/105 (33%), Positives = 56/105 (53%)
 Frame = +3

Query: 417 HDRGVNWASFHPTLPLIVSGADDRQVKLWRMNDTKAWEVDTLRGHMNNVSCVLFHAKQDI 596
           HD  V    FH + PL VSG DD ++K+W     +   + TL GH++ +  V FH +   
Sbjct: 50  HDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKLHRC--LFTLLGHLDYIRTVQFHHEYPW 107

Query: 597 IVSNSEDKSIRVWDATKRTAIQTFRREHDRFWILASHPEMNLLAA 731
           IVS S+D++IR+W+   RT I      +      + HP+ +L+ +
Sbjct: 108 IVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVS 152


>ref|XP_002318013.1| predicted protein [Populus trichocarpa] gi|222858686|gb|EEE96233.1|
            predicted protein [Populus trichocarpa]
          Length = 1220

 Score =  626 bits (1615), Expect = e-177
 Identities = 295/319 (92%), Positives = 311/319 (97%)
 Frame = +3

Query: 3    LFVSGGDDYKIKVWNYKLHRCLFTLLGHLDYIRTVQFHHEHPWIVSASDDQTIRIWNWQS 182
            LFVSGGDDYKIKVWNYKLHRCLFTLLGHLDYIRTVQFHHE+PWIVSASDDQTIRIWNWQS
Sbjct: 65   LFVSGGDDYKIKVWNYKLHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQS 124

Query: 183  RTCISVLTGHNHYVMCALFHLKDDLVVSASLDQTVRVWDIGSLRKKTASPADDILRLSQI 362
            RTCISVLTGHNHYVMCA FH K+DLVVSASLDQTVRVWDIG+LRKKT SPADDI+RL+Q+
Sbjct: 125  RTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDIMRLTQM 184

Query: 363  NTDFFGGVDAVVKYVLEGHDRGVNWASFHPTLPLIVSGADDRQVKLWRMNDTKAWEVDTL 542
            NTD FGGVDAVVKYVLEGHDRGVNWA+FHPTLPLIVSGADDRQVKLWRMNDTKAWEVDTL
Sbjct: 185  NTDLFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNDTKAWEVDTL 244

Query: 543  RGHMNNVSCVLFHAKQDIIVSNSEDKSIRVWDATKRTAIQTFRREHDRFWILASHPEMNL 722
            RGHMNNVSCV+FHAKQDIIVSNSEDKSIRVWD TKRT +QTFRREHDRFWILASHPEMNL
Sbjct: 245  RGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHPEMNL 304

Query: 723  LAAGHDSGVIVFKLERERPALSVSGDSMFYAKDRFLRFYEFSTQRETQVIPIRRPGSTSL 902
            LAAGHDSG+IVFKLERERPA ++SGDS+FY KDRFLRF+EFSTQR+TQVIPIRRPG+TSL
Sbjct: 305  LAAGHDSGMIVFKLERERPAFALSGDSLFYTKDRFLRFFEFSTQRDTQVIPIRRPGTTSL 364

Query: 903  NQSPRTLSYSPTENAVLIC 959
            NQSPRTLSYSPTENAVLIC
Sbjct: 365  NQSPRTLSYSPTENAVLIC 383



 Score = 66.6 bits (161), Expect = 8e-09
 Identities = 35/105 (33%), Positives = 56/105 (53%)
 Frame = +3

Query: 417 HDRGVNWASFHPTLPLIVSGADDRQVKLWRMNDTKAWEVDTLRGHMNNVSCVLFHAKQDI 596
           HD  V    FH + PL VSG DD ++K+W     +   + TL GH++ +  V FH +   
Sbjct: 50  HDGPVRGVHFHKSQPLFVSGGDDYKIKVWNYKLHRC--LFTLLGHLDYIRTVQFHHEYPW 107

Query: 597 IVSNSEDKSIRVWDATKRTAIQTFRREHDRFWILASHPEMNLLAA 731
           IVS S+D++IR+W+   RT I      +      + HP+ +L+ +
Sbjct: 108 IVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVS 152


>ref|XP_002529504.1| coatomer alpha subunit, putative [Ricinus communis]
            gi|223531020|gb|EEF32873.1| coatomer alpha subunit,
            putative [Ricinus communis]
          Length = 1217

 Score =  621 bits (1602), Expect = e-176
 Identities = 294/319 (92%), Positives = 308/319 (96%)
 Frame = +3

Query: 3    LFVSGGDDYKIKVWNYKLHRCLFTLLGHLDYIRTVQFHHEHPWIVSASDDQTIRIWNWQS 182
            LFVSGGDDYKIKVWNYK+HRCLFTLLGHLDYIRTVQFHHE+PWIVSASDDQTIRIWNWQS
Sbjct: 65   LFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQS 124

Query: 183  RTCISVLTGHNHYVMCALFHLKDDLVVSASLDQTVRVWDIGSLRKKTASPADDILRLSQI 362
            RTCISVLTGHNHYVMCA FH K+DLVVSASLDQTVRVWDIG+LRKKT SPADDILRLSQ+
Sbjct: 125  RTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDILRLSQM 184

Query: 363  NTDFFGGVDAVVKYVLEGHDRGVNWASFHPTLPLIVSGADDRQVKLWRMNDTKAWEVDTL 542
            NTD FGGVDAVVKYVLEGHDRGVNWASFHPTLPLIVSGADDRQVKLWRMNDTKAWEVD L
Sbjct: 185  NTDIFGGVDAVVKYVLEGHDRGVNWASFHPTLPLIVSGADDRQVKLWRMNDTKAWEVDAL 244

Query: 543  RGHMNNVSCVLFHAKQDIIVSNSEDKSIRVWDATKRTAIQTFRREHDRFWILASHPEMNL 722
            RGHMNNVSCV+FHAKQDIIVSNSEDKSIRVWD TKR  IQ FRREHDRFWILASHPEMNL
Sbjct: 245  RGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRMGIQNFRREHDRFWILASHPEMNL 304

Query: 723  LAAGHDSGVIVFKLERERPALSVSGDSMFYAKDRFLRFYEFSTQRETQVIPIRRPGSTSL 902
            LAAGHDSG+IVFKLERERPA +VSGDS+FY K+RFLRF++FSTQR+TQVIPIRRPG+TSL
Sbjct: 305  LAAGHDSGMIVFKLERERPAFAVSGDSLFYVKERFLRFFQFSTQRDTQVIPIRRPGTTSL 364

Query: 903  NQSPRTLSYSPTENAVLIC 959
            NQSPRTLSYSPTENAVLIC
Sbjct: 365  NQSPRTLSYSPTENAVLIC 383



 Score = 67.4 bits (163), Expect = 5e-09
 Identities = 35/105 (33%), Positives = 57/105 (54%)
 Frame = +3

Query: 417 HDRGVNWASFHPTLPLIVSGADDRQVKLWRMNDTKAWEVDTLRGHMNNVSCVLFHAKQDI 596
           HD  V   +FH + PL VSG DD ++K+W     +   + TL GH++ +  V FH +   
Sbjct: 50  HDGPVRGVNFHNSQPLFVSGGDDYKIKVWNYKMHRC--LFTLLGHLDYIRTVQFHHEYPW 107

Query: 597 IVSNSEDKSIRVWDATKRTAIQTFRREHDRFWILASHPEMNLLAA 731
           IVS S+D++IR+W+   RT I      +      + HP+ +L+ +
Sbjct: 108 IVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVS 152


>ref|XP_004165124.1| PREDICTED: coatomer subunit alpha-1-like, partial [Cucumis sativus]
          Length = 855

 Score =  621 bits (1601), Expect = e-176
 Identities = 289/319 (90%), Positives = 309/319 (96%)
 Frame = +3

Query: 3    LFVSGGDDYKIKVWNYKLHRCLFTLLGHLDYIRTVQFHHEHPWIVSASDDQTIRIWNWQS 182
            LFVSGGDDYKIKVWNYK HRCLFTLLGHLDYIRTVQFHHE+PWIVSASDDQTIRIWNWQS
Sbjct: 65   LFVSGGDDYKIKVWNYKTHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQS 124

Query: 183  RTCISVLTGHNHYVMCALFHLKDDLVVSASLDQTVRVWDIGSLRKKTASPADDILRLSQI 362
            RTCISVLTGHNHYVMCA FH K+DLVVSASLDQTVRVWDIG+LRKKT SPADDILRLSQ+
Sbjct: 125  RTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDILRLSQM 184

Query: 363  NTDFFGGVDAVVKYVLEGHDRGVNWASFHPTLPLIVSGADDRQVKLWRMNDTKAWEVDTL 542
            N D FGGVDAVVKYVLEGHDRGVNWA+FHPTLPLIVSGADDRQVKLWRMNDTKAWEVDTL
Sbjct: 185  NADLFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNDTKAWEVDTL 244

Query: 543  RGHMNNVSCVLFHAKQDIIVSNSEDKSIRVWDATKRTAIQTFRREHDRFWILASHPEMNL 722
            RGHMNNVSCV+FHAKQDIIVSNSEDKSIR+WDATKRT +QTFRREHDRFWILA+HPEMNL
Sbjct: 245  RGHMNNVSCVMFHAKQDIIVSNSEDKSIRIWDATKRTGLQTFRREHDRFWILAAHPEMNL 304

Query: 723  LAAGHDSGVIVFKLERERPALSVSGDSMFYAKDRFLRFYEFSTQRETQVIPIRRPGSTSL 902
            LAAGHDSG+IVFKLERERPA ++SGDS+FY KDRFLR+YEFSTQ++TQV+PIRRPGSTSL
Sbjct: 305  LAAGHDSGMIVFKLERERPAFAISGDSLFYVKDRFLRYYEFSTQKDTQVVPIRRPGSTSL 364

Query: 903  NQSPRTLSYSPTENAVLIC 959
            NQSPRTLS+SPTEN +L+C
Sbjct: 365  NQSPRTLSFSPTENTILVC 383


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