BLASTX nr result

ID: Panax21_contig00020374 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00020374
         (351 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316298.1| predicted protein [Populus trichocarpa] gi|2...   135   5e-30
ref|XP_003621860.1| Carnitinyl-CoA dehydratase [Medicago truncat...   133   1e-29
ref|XP_002279179.1| PREDICTED: fatty acid oxidation complex subu...   132   4e-29
ref|XP_002283937.1| PREDICTED: carnitinyl-CoA dehydratase-like [...   132   4e-29
emb|CAN82362.1| hypothetical protein VITISV_029255 [Vitis vinifera]   132   4e-29

>ref|XP_002316298.1| predicted protein [Populus trichocarpa] gi|222865338|gb|EEF02469.1|
           predicted protein [Populus trichocarpa]
          Length = 235

 Score =  135 bits (339), Expect = 5e-30
 Identities = 70/116 (60%), Positives = 87/116 (75%)
 Frame = -3

Query: 349 TLTGDDEHRFNPTLLDSISAALHRVKXXXXXXXXXXXXXXXAQGKFFSNGYDLKWALAEQ 170
           TLTG DEHR NPTL+DSI +AL RV+                +G+FFSNG+DL WA  + 
Sbjct: 14  TLTGSDEHRLNPTLIDSIRSALRRVRAEPASPSSALVTIA--EGRFFSNGFDLAWA--QS 69

Query: 169 SQGRPQILSSKLRSVVRDLISLPMPTIAAVSGHASAGGFILALSHDYVLMRKDRGF 2
           SQ R +++S+KL+ +V++LISLPMPTIA+V+GHASA G ILALSHDYVLMRKDRGF
Sbjct: 70  SQPRRELMSAKLQLLVKELISLPMPTIASVTGHASAAGMILALSHDYVLMRKDRGF 125


>ref|XP_003621860.1| Carnitinyl-CoA dehydratase [Medicago truncatula]
           gi|355496875|gb|AES78078.1| Carnitinyl-CoA dehydratase
           [Medicago truncatula] gi|388518089|gb|AFK47106.1|
           unknown [Medicago truncatula]
          Length = 233

 Score =  133 bits (335), Expect = 1e-29
 Identities = 70/116 (60%), Positives = 84/116 (72%)
 Frame = -3

Query: 349 TLTGDDEHRFNPTLLDSISAALHRVKXXXXXXXXXXXXXXXAQGKFFSNGYDLKWALAEQ 170
           TLTG+DEHR NPTLL+SI +ALHRV+                 GKFFSNGYD+ WA  + 
Sbjct: 14  TLTGNDEHRLNPTLLNSIKSALHRVRQQATTSSVLITTA---HGKFFSNGYDIDWA--QD 68

Query: 169 SQGRPQILSSKLRSVVRDLISLPMPTIAAVSGHASAGGFILALSHDYVLMRKDRGF 2
           ++ R  ++   LRSVV +L+SLPMPTIAAV+GHASA G+ILALSHDYVLMR DRGF
Sbjct: 69  NKSRIILIDDLLRSVVSELLSLPMPTIAAVTGHASAAGYILALSHDYVLMRSDRGF 124


>ref|XP_002279179.1| PREDICTED: fatty acid oxidation complex subunit alpha [Vitis
           vinifera] gi|296086262|emb|CBI31703.3| unnamed protein
           product [Vitis vinifera]
          Length = 240

 Score =  132 bits (331), Expect = 4e-29
 Identities = 73/117 (62%), Positives = 82/117 (70%), Gaps = 1/117 (0%)
 Frame = -3

Query: 349 TLTGDDEHRFNPTLLDSISAALHRVKXXXXXXXXXXXXXXXAQGKFFSNGYDLKWALAEQ 170
           TLTG  EHR NPTLLD+ISAAL RV+                +GKFFSNGYDL WA A  
Sbjct: 14  TLTGPGEHRLNPTLLDAISAALSRVRAESSMSFALITTA---EGKFFSNGYDLAWASASG 70

Query: 169 S-QGRPQILSSKLRSVVRDLISLPMPTIAAVSGHASAGGFILALSHDYVLMRKDRGF 2
               R +++SSKLRS+V DLISLPMPTIAA+SGH SA   I+ALSHDYVLMR DRGF
Sbjct: 71  VFLDRSKLMSSKLRSLVADLISLPMPTIAAISGHCSAAAAIIALSHDYVLMRNDRGF 127


>ref|XP_002283937.1| PREDICTED: carnitinyl-CoA dehydratase-like [Vitis vinifera]
          Length = 241

 Score =  132 bits (331), Expect = 4e-29
 Identities = 73/118 (61%), Positives = 82/118 (69%), Gaps = 2/118 (1%)
 Frame = -3

Query: 349 TLTGDDEHRFNPTLLDSISAALHRVKXXXXXXXXXXXXXXXAQGKFFSNGYDLKWALAEQ 170
           TLTG  EHR NPTLLD+ISAAL RV+                +GKFFSNGYDL WA A  
Sbjct: 14  TLTGPGEHRLNPTLLDAISAALSRVRAESSMSSALITTA---EGKFFSNGYDLAWASASG 70

Query: 169 SQ--GRPQILSSKLRSVVRDLISLPMPTIAAVSGHASAGGFILALSHDYVLMRKDRGF 2
                R +++SSKLRS+V DL+SLPMPTIAA+SGH SA   ILALSHDYVLMR DRGF
Sbjct: 71  GVFLDRVKLMSSKLRSLVADLLSLPMPTIAAISGHCSAAAAILALSHDYVLMRNDRGF 128


>emb|CAN82362.1| hypothetical protein VITISV_029255 [Vitis vinifera]
          Length = 241

 Score =  132 bits (331), Expect = 4e-29
 Identities = 73/117 (62%), Positives = 82/117 (70%), Gaps = 1/117 (0%)
 Frame = -3

Query: 349 TLTGDDEHRFNPTLLDSISAALHRVKXXXXXXXXXXXXXXXAQGKFFSNGYDLKWALAEQ 170
           TLTG  EHR NPTLLD+ISAAL RV+                +GKFFSNGYDL WA A  
Sbjct: 14  TLTGPGEHRLNPTLLDAISAALSRVRAESSMSFALITTA---EGKFFSNGYDLAWASASG 70

Query: 169 S-QGRPQILSSKLRSVVRDLISLPMPTIAAVSGHASAGGFILALSHDYVLMRKDRGF 2
               R +++SSKLRS+V DLISLPMPTIAA+SGH SA   I+ALSHDYVLMR DRGF
Sbjct: 71  VFLDRSKLMSSKLRSLVADLISLPMPTIAAISGHCSAAAAIIALSHDYVLMRNDRGF 127


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